RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 SORBS1Q9BX66 1292 aaKnown RBP4.17□□□□□ -1.74
EXOSC3-208ENST00000496910 C22orf23Q9BZE7 217 aa4.17□□□□□ -1.74
EXOSC3-208ENST00000496910 BTBD1Q9H0C5 482 aa4.17□□□□□ -1.74
EXOSC3-208ENST00000496910 LMAN2LQ9H0V9 348 aa4.17□□□□□ -1.74
EXOSC3-208ENST00000496910 C14orf93Q9H972 538 aaKnown RBP4.17□□□□□ -1.74
EXOSC3-208ENST00000496910 WASH6PQ9NQA3 447 aa4.17□□□□□ -1.74
EXOSC3-208ENST00000496910 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.17□□□□□ -1.74
EXOSC3-208ENST00000496910 TRPS1Q9UHF7 1281 aa4.17□□□□□ -1.74
EXOSC3-208ENST00000496910 LIMCH1Q9UPQ0 1083 aa4.17□□□□□ -1.74
EXOSC3-208ENST00000496910 NR2E1Q9Y466 385 aa4.17□□□□□ -1.74
EXOSC3-208ENST00000496910 DNAH14Q0VDD8 3507 aa4.17□□□□□ -1.74
EXOSC3-208ENST00000496910 SPEGQ15772 3267 aa4.17□□□□□ -1.74
EXOSC3-208ENST00000496910 COL4A3Q01955 1670 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 ARID1BQ8NFD5 2236 aaPredicted RBP4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 FSD2A1L4K1 749 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 POM121BA6NF01 834 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 TSPY2A6NKD2 308 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 FFAR2O15552 330 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 HTRA2O43464 458 aaPredicted RBP4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 FGF18O76093 207 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 SASH1O94885 1247 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 TSPY3P0CV98 308 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 TSPY8P0CW00 308 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 HSPA7P48741 367 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 WNT3AP56704 352 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 BPIFB4P59827 614 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 DCAF7P61962 342 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 KRT83P78385 493 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 TSPY1Q01534 308 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 MEA1Q16626 185 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 MPEG1Q2M385 716 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 C3orf36Q3SXR2 165 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 LRIT3Q3SXY7 679 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 LCE3BQ5TA77 95 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 SLFN13Q68D06 897 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 JMJD6Q6NYC1 403 aaPredicted RBP4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 FBXO46Q6PJ61 603 aaPredicted RBP4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 PLEKHH3Q7Z736 793 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 PPM1NQ8N819 430 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 ANKRD53Q8N9V6 530 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 ATG16L2Q8NAA4 619 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 ANKRD52Q8NB46 1076 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 GPR156Q8NFN8 814 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 DNERQ8NFT8 737 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 NRG4Q8WWG1 115 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 ATRIPQ8WXE1 791 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 APIPQ96GX9 242 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 TEPSINQ96N21 525 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 ZCCHC4Q9H5U6 513 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 MSL2Q9HCI7 577 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 TLR9Q9NR96 1032 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 USP40Q9NVE5 1235 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 NFKBIL1Q9UBC1 381 aaPredicted RBP4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 ITGB1BP2Q9UKP3 347 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 FAM184BQ9ULE4 1060 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 PADI4Q9UM07 663 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 MAGED2Q9UNF1 606 aaPredicted RBP4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 GPR34Q9UPC5 381 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 SNX13Q9Y5W8 968 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 TRPM2O94759 1503 aa4.16□□□□□ -1.74
EXOSC3-208ENST00000496910 ATRNL1Q5VV63 1379 aa4.15□□□□□ -1.74
EXOSC3-208ENST00000496910 OVOS2A0A0G2JMS6 1433 aa4.15□□□□□ -1.74
EXOSC3-208ENST00000496910 OVOS2A0A0J9YW53 1432 aa4.15□□□□□ -1.74
EXOSC3-208ENST00000496910 OVOS2Q6IE36 1432 aa4.15□□□□□ -1.74
EXOSC3-208ENST00000496910 RRBP1Q9P2E9 1410 aaKnown RBP4.15□□□□□ -1.74
EXOSC3-208ENST00000496910 ADCY6O43306 1168 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 SKAP2O75563 359 aaPredicted RBP4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 ARIH2O95376 493 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 JUNP05412 331 aaKnown RBP4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 HARSP12081 509 aaKnown RBP4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 AKR1B1P15121 316 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 CR2P20023 1033 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 SREBF1P36956 1147 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 ALDH9A1P49189 494 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 MAN2A2P49641 1150 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 NR1H2P55055 460 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 RAC3P60763 192 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 RIN1Q13671 783 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 SURF1Q15526 300 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 CSRP2Q16527 193 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 PFKFB4Q16877 469 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 MUM1L1Q5H9M0 696 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 LCE4AQ5TA78 99 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 TCTN3Q6NUS6 607 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 TMCO3Q6UWJ1 677 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 DSTYKQ6XUX3 929 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 CCDC129Q6ZRS4 1044 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 ARHGEF18Q6ZSZ5 1173 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 LRRTM4Q86VH4 590 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 NRSN1Q8IZ57 195 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 PLBD2Q8NHP8 589 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 BRI3BPQ8WY22 251 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 GCDHQ92947 438 aaPredicted RBP4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 C18orf8Q96DM3 657 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 RPL10LQ96L21 214 aaKnown RBP4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 WWC2-AS2Q96NR7 200 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 GNRHR2Q96P88 292 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 ASB2Q96Q27 587 aa4.15□□□□□ -1.75
EXOSC3-208ENST00000496910 UIMC1Q96RL1 719 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms