RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 C17orf75Q9HAS0 396 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 APOBEC3GQ9HC16 384 aaKnown RBP6.51□□□□□ -1.37
SSBP1-213ENST00000496622 TIMMDC1Q9NPL8 285 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 ABCF3Q9NUQ8 709 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 ERAP1Q9NZ08 941 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 FBXL5Q9UKA1 691 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 HES2Q9Y543 173 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 SAR1BQ9Y6B6 198 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 UBE4BO95155 1302 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 GTPBP10A4D1E9 387 aaKnown RBP6.51□□□□□ -1.37
SSBP1-213ENST00000496622 CHUKO15111 745 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 VNN1O95497 513 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 ZBTB48P10074 688 aaPredicted RBP6.51□□□□□ -1.37
SSBP1-213ENST00000496622 GCLCP48506 637 aaPredicted RBP6.51□□□□□ -1.37
SSBP1-213ENST00000496622 GUCY2FP51841 1108 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 GALCP54803 685 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 BNIP1Q12981 228 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 ORC1Q13415 861 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 ALCAMQ13740 583 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 SMC1AQ14683 1233 aaKnown RBP6.51□□□□□ -1.37
SSBP1-213ENST00000496622 MAPK6Q16659 721 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 MUM1Q2TAK8 710 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 MARCH8Q5T0T0 291 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 IRGCQ6NXR0 463 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 TAOK1Q7L7X3 1001 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 TRAPPC11Q7Z392 1133 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 PASD1Q8IV76 773 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 ZNF75CPQ92670 426 aaPredicted RBP6.51□□□□□ -1.37
SSBP1-213ENST00000496622 MAELQ96JY0 434 aaKnown RBP6.51□□□□□ -1.37
SSBP1-213ENST00000496622 MFSD14AQ96MC6 490 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 GORASP1Q9BQQ3 440 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 TIPINQ9BVW5 301 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 EDEM3Q9BZQ6 932 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 MTMR12Q9C0I1 747 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 VCX3BQ9H321 246 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 ZCCHC17Q9NP64 241 aaKnown RBP6.51□□□□□ -1.37
SSBP1-213ENST00000496622 MTMR10Q9NXD2 777 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 SCHIP1Q9P0W5 487 aaPredicted RBP6.51□□□□□ -1.37
SSBP1-213ENST00000496622 HCN2Q9UL51 889 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 ZMIZ1Q9ULJ6 1067 aa6.51□□□□□ -1.37
SSBP1-213ENST00000496622 GRID2IPA4D2P6 1211 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 STRNO43815 780 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 C22orf31O95567 290 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 GH1P01241 217 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 PRKCBP05771 671 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 CXCL8P10145 99 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 DESP17661 470 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 CD58P19256 250 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 IBSPP21815 317 aaPredicted RBP6.5□□□□□ -1.37
SSBP1-213ENST00000496622 GPC1P35052 558 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 PAPOLAP51003 745 aaKnown RBP6.5□□□□□ -1.37
SSBP1-213ENST00000496622 TFAMQ00059 246 aaKnown RBP6.5□□□□□ -1.37
SSBP1-213ENST00000496622 TNFAIP2Q03169 654 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 C2orf54Q08AI8 447 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 PLEKHG6Q3KR16 790 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 WLSQ5T9L3 541 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 RGMBQ6NW40 437 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 NCCRP1Q6ZVX7 275 aaPredicted RBP6.5□□□□□ -1.37
SSBP1-213ENST00000496622 PLPPR4Q7Z2D5 763 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 C12orf56Q8IXR9 622 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 GSPT2Q8IYD1 628 aaKnown RBP6.5□□□□□ -1.37
SSBP1-213ENST00000496622 SHCBP1Q8NEM2 672 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 IPCEF1Q8WWN9 437 aaPredicted RBP6.5□□□□□ -1.37
SSBP1-213ENST00000496622 SYN2Q92777 582 aaPredicted RBP6.5□□□□□ -1.37
SSBP1-213ENST00000496622 ALS2CR12Q96Q35 445 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 VRTNQ9H8Y1 702 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 KCTD5Q9NXV2 234 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 MYO1AQ9UBC5 1043 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 MORF4L1Q9UBU8 362 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 COG5Q9UP83 839 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 IGKV6-21A0A0C4DH24 114 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 MYADML2A6NDP7 307 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 MEFVO15553 781 aaPredicted RBP6.5□□□□□ -1.37
SSBP1-213ENST00000496622 EXTL3O43909 919 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 FAM189A1O60320 539 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 FTLP02792 175 aaPredicted RBP6.5□□□□□ -1.37
SSBP1-213ENST00000496622 WEE2P0C1S8 567 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 CCNCP24863 283 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 ITGB8P26012 769 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 CDC25CP30307 473 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 LIG3P49916 1009 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 RTP1P59025 263 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 ROR2Q01974 943 aaKnown RBP6.5□□□□□ -1.37
SSBP1-213ENST00000496622 CETN1Q12798 172 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 LAMC2Q13753 1193 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 NAB2Q15742 525 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 SH2D4BQ5SQS7 431 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 AADACL2Q6P093 401 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 SCARA5Q6ZMJ2 495 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 RSRC2Q7L4I2 434 aaKnown RBP6.5□□□□□ -1.37
SSBP1-213ENST00000496622 SRGAP1Q7Z6B7 1085 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 ADAT2Q7Z6V5 191 aaKnown RBP6.5□□□□□ -1.37
SSBP1-213ENST00000496622 CREG2Q8IUH2 290 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 KIAA0319LQ8IZA0 1049 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 ESX1Q8N693 406 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 OR6J1Q8NGC5 347 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 CPA5Q8WXQ8 436 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 GTPBP3Q969Y2 492 aaKnown RBP6.5□□□□□ -1.37
SSBP1-213ENST00000496622 PPP1R14BQ96C90 147 aa6.5□□□□□ -1.37
SSBP1-213ENST00000496622 HVCN1Q96D96 273 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms