RNA–Protein interactions for RNA: ENST00000496325.5

PRKCZ-222, Transcript of protein kinase C zeta, human

TSL 4

Gene PRKCZ, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCZ-222	ENST00000496325	FAM78A	Q5JUQ0	283 aa		16.86	■□□□□ 0.29
PRKCZ-222	ENST00000496325	ZC3H14	Q6PJT7	736 aa	Known RBP	16.86	■□□□□ 0.29
PRKCZ-222	ENST00000496325	PAQR9	Q6ZVX9	377 aa		16.86	■□□□□ 0.29
PRKCZ-222	ENST00000496325	TRIM59	Q8IWR1	403 aa		16.86	■□□□□ 0.29
PRKCZ-222	ENST00000496325	WHAMM	Q8TF30	809 aa		16.86	■□□□□ 0.29
PRKCZ-222	ENST00000496325	NXPE3	Q969Y0	559 aa		16.86	■□□□□ 0.29
PRKCZ-222	ENST00000496325	KXD1	Q9BQD3	176 aa		16.86	■□□□□ 0.29
PRKCZ-222	ENST00000496325	ZNF518B	Q9C0D4	1074 aa		16.86	■□□□□ 0.29
PRKCZ-222	ENST00000496325	NIF3L1	Q9GZT8	377 aa		16.86	■□□□□ 0.29
PRKCZ-222	ENST00000496325	GDE1	Q9NZC3	331 aa		16.86	■□□□□ 0.29
PRKCZ-222	ENST00000496325	MAGED2	Q9UNF1	606 aa	Predicted RBP	16.86	■□□□□ 0.29
PRKCZ-222	ENST00000496325	CD58	P19256	250 aa		16.85	■□□□□ 0.29
PRKCZ-222	ENST00000496325	FCAR	P24071	287 aa		16.85	■□□□□ 0.29
PRKCZ-222	ENST00000496325	GRIK1	P39086	918 aa		16.85	■□□□□ 0.29
PRKCZ-222	ENST00000496325	MARS	P56192	900 aa	Known RBP	16.85	■□□□□ 0.29
PRKCZ-222	ENST00000496325	CYP4F8	P98187	520 aa		16.85	■□□□□ 0.29
PRKCZ-222	ENST00000496325	INCA1	Q0VD86	236 aa		16.85	■□□□□ 0.29
PRKCZ-222	ENST00000496325	TAF12	Q16514	161 aa		16.85	■□□□□ 0.29
PRKCZ-222	ENST00000496325	TANGO2	Q6ICL3	276 aa		16.85	■□□□□ 0.29
PRKCZ-222	ENST00000496325	VSTM1	Q6UX27	236 aa		16.85	■□□□□ 0.29
PRKCZ-222	ENST00000496325	TMEM150A	Q86TG1	271 aa		16.85	■□□□□ 0.29
PRKCZ-222	ENST00000496325	IRF2BP1	Q8IU81	584 aa		16.85	■□□□□ 0.29
PRKCZ-222	ENST00000496325	GPIHBP1	Q8IV16	184 aa		16.85	■□□□□ 0.29
PRKCZ-222	ENST00000496325	CRYBG2	Q8N1P7	616 aa		16.85	■□□□□ 0.29
PRKCZ-222	ENST00000496325	CCDC150	Q8NCX0	1101 aa		16.85	■□□□□ 0.29
PRKCZ-222	ENST00000496325	ATXN3L	Q9H3M9	355 aa		16.85	■□□□□ 0.29
PRKCZ-222	ENST00000496325	CYP3A43	Q9HB55	503 aa		16.85	■□□□□ 0.29
PRKCZ-222	ENST00000496325	SIT1	Q9Y3P8	196 aa		16.85	■□□□□ 0.29
PRKCZ-222	ENST00000496325	NOL4	O94818	638 aa		16.84	■□□□□ 0.29
PRKCZ-222	ENST00000496325	GNA14	O95837	355 aa		16.84	■□□□□ 0.29
PRKCZ-222	ENST00000496325	F11	P03951	625 aa		16.84	■□□□□ 0.29
PRKCZ-222	ENST00000496325	CSH1	P0DML2	217 aa		16.84	■□□□□ 0.29
PRKCZ-222	ENST00000496325	CSH2	P0DML3	217 aa		16.84	■□□□□ 0.29
PRKCZ-222	ENST00000496325	KCNH2	Q12809	1159 aa		16.84	■□□□□ 0.29
PRKCZ-222	ENST00000496325	LRMP	Q12912	555 aa		16.84	■□□□□ 0.29
PRKCZ-222	ENST00000496325	RBM43	Q6ZSC3	357 aa	Known RBP	16.84	■□□□□ 0.29
PRKCZ-222	ENST00000496325	MTSS1L	Q765P7	747 aa		16.84	■□□□□ 0.29
PRKCZ-222	ENST00000496325	UNC93A	Q86WB7	457 aa		16.84	■□□□□ 0.29
PRKCZ-222	ENST00000496325	FUK	Q8N0W3	1084 aa		16.84	■□□□□ 0.29
PRKCZ-222	ENST00000496325	C12orf29	Q8N999	325 aa		16.84	■□□□□ 0.29
PRKCZ-222	ENST00000496325	TNIP3	Q96KP6	325 aa		16.84	■□□□□ 0.29
PRKCZ-222	ENST00000496325	ASB16	Q96NS5	453 aa		16.84	■□□□□ 0.29
PRKCZ-222	ENST00000496325	ARID3A	Q99856	593 aa		16.84	■□□□□ 0.29
PRKCZ-222	ENST00000496325	ELOVL4	Q9GZR5	314 aa		16.84	■□□□□ 0.29
PRKCZ-222	ENST00000496325	NCAN	O14594	1321 aa		16.84	■□□□□ 0.29
PRKCZ-222	ENST00000496325	COL4A2	P08572	1712 aa		16.84	■□□□□ 0.29
PRKCZ-222	ENST00000496325		F8VP50	259 aa		16.83	■□□□□ 0.28
PRKCZ-222	ENST00000496325	CILP	O75339	1184 aa		16.83	■□□□□ 0.28
PRKCZ-222	ENST00000496325	FGFR1OP	O95684	399 aa	Known RBP	16.83	■□□□□ 0.28
PRKCZ-222	ENST00000496325	SRF	P11831	508 aa		16.83	■□□□□ 0.28
PRKCZ-222	ENST00000496325	CCDC130	P13994	396 aa		16.83	■□□□□ 0.28
PRKCZ-222	ENST00000496325	USP46	P62068	366 aa		16.83	■□□□□ 0.28
PRKCZ-222	ENST00000496325	WDR44	Q5JSH3	913 aa		16.83	■□□□□ 0.28
PRKCZ-222	ENST00000496325	GPR158	Q5T848	1215 aa		16.83	■□□□□ 0.28
PRKCZ-222	ENST00000496325	FAM35A	Q86V20	835 aa		16.83	■□□□□ 0.28
PRKCZ-222	ENST00000496325	CREBRF	Q8IUR6	639 aa		16.83	■□□□□ 0.28
PRKCZ-222	ENST00000496325	LMO3	Q8TAP4	145 aa		16.83	■□□□□ 0.28
PRKCZ-222	ENST00000496325	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	16.83	■□□□□ 0.28
PRKCZ-222	ENST00000496325	SPATA17	Q96L03	361 aa		16.83	■□□□□ 0.28
PRKCZ-222	ENST00000496325	CNOT6L	Q96LI5	555 aa	Known RBP	16.83	■□□□□ 0.28
PRKCZ-222	ENST00000496325	KCNK16	Q96T55	309 aa		16.83	■□□□□ 0.28
PRKCZ-222	ENST00000496325	MED10	Q9BTT4	135 aa		16.83	■□□□□ 0.28
PRKCZ-222	ENST00000496325	SLITRK6	Q9H5Y7	841 aa		16.83	■□□□□ 0.28
PRKCZ-222	ENST00000496325	ARHGEF3	Q9NR81	526 aa		16.83	■□□□□ 0.28
PRKCZ-222	ENST00000496325	FAM49B	Q9NUQ9	324 aa		16.83	■□□□□ 0.28
PRKCZ-222	ENST00000496325	MYOF	Q9NZM1	2061 aa		16.83	■□□□□ 0.28
PRKCZ-222	ENST00000496325	PMM2	O15305	246 aa		16.82	■□□□□ 0.28
PRKCZ-222	ENST00000496325	ECI2	O75521	394 aa		16.82	■□□□□ 0.28
PRKCZ-222	ENST00000496325	TADA3	O75528	432 aa		16.82	■□□□□ 0.28
PRKCZ-222	ENST00000496325	FGF19	O95750	216 aa		16.82	■□□□□ 0.28
PRKCZ-222	ENST00000496325	CCDC192	P0DO97	292 aa		16.82	■□□□□ 0.28
PRKCZ-222	ENST00000496325	CDC25C	P30307	473 aa		16.82	■□□□□ 0.28
PRKCZ-222	ENST00000496325	VIPR2	P41587	438 aa		16.82	■□□□□ 0.28
PRKCZ-222	ENST00000496325	GPC5	P78333	572 aa		16.82	■□□□□ 0.28
PRKCZ-222	ENST00000496325	ZNF394	Q53GI3	561 aa		16.82	■□□□□ 0.28
PRKCZ-222	ENST00000496325	PHLDB3	Q6NSJ2	640 aa		16.82	■□□□□ 0.28
PRKCZ-222	ENST00000496325	SMARCD2	Q92925	531 aa		16.82	■□□□□ 0.28
PRKCZ-222	ENST00000496325	ELSPBP1	Q96BH3	223 aa		16.82	■□□□□ 0.28
PRKCZ-222	ENST00000496325	RSPRY1	Q96DX4	576 aa		16.82	■□□□□ 0.28
PRKCZ-222	ENST00000496325	TRMT2B	Q96GJ1	504 aa	Known RBP	16.82	■□□□□ 0.28
PRKCZ-222	ENST00000496325	C8orf48	Q96LL4	319 aa		16.82	■□□□□ 0.28
PRKCZ-222	ENST00000496325	MYRFL	Q96LU7	910 aa		16.82	■□□□□ 0.28
PRKCZ-222	ENST00000496325	NT5C1A	Q9BXI3	368 aa		16.82	■□□□□ 0.28
PRKCZ-222	ENST00000496325	SLC46A2	Q9BY10	475 aa		16.82	■□□□□ 0.28
PRKCZ-222	ENST00000496325	GPR88	Q9GZN0	384 aa		16.82	■□□□□ 0.28
PRKCZ-222	ENST00000496325	ZFP14	Q9HCL3	533 aa		16.82	■□□□□ 0.28
PRKCZ-222	ENST00000496325	CISH	Q9NSE2	258 aa		16.82	■□□□□ 0.28
PRKCZ-222	ENST00000496325	NCDN	Q9UBB6	729 aa		16.82	■□□□□ 0.28
PRKCZ-222	ENST00000496325	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	16.82	■□□□□ 0.28
PRKCZ-222	ENST00000496325	TRIM66	O15016	1216 aa		16.81	■□□□□ 0.28
PRKCZ-222	ENST00000496325	BEST1	O76090	585 aa		16.81	■□□□□ 0.28
PRKCZ-222	ENST00000496325	MBD3	O95983	291 aa		16.81	■□□□□ 0.28
PRKCZ-222	ENST00000496325	AFP	P02771	609 aa	Known RBP	16.81	■□□□□ 0.28
PRKCZ-222	ENST00000496325	TGM1	P22735	817 aa		16.81	■□□□□ 0.28
PRKCZ-222	ENST00000496325	ANXA13	P27216	316 aa		16.81	■□□□□ 0.28
PRKCZ-222	ENST00000496325	VIT	Q6UXI7	678 aa		16.81	■□□□□ 0.28
PRKCZ-222	ENST00000496325	ARID3B	Q8IVW6	561 aa	Predicted RBP	16.81	■□□□□ 0.28
PRKCZ-222	ENST00000496325	ZMIZ2	Q8NF64	920 aa		16.81	■□□□□ 0.28
PRKCZ-222	ENST00000496325	PJA1	Q8NG27	643 aa		16.81	■□□□□ 0.28
PRKCZ-222	ENST00000496325	SLC2A14	Q8TDB8	520 aa		16.81	■□□□□ 0.28

Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms