RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 SYCP1Q15431 976 aa12.64□□□□□ -0.39
APTX-233ENST00000496030 MAPRE1Q15691 268 aaKnown RBP12.64□□□□□ -0.39
APTX-233ENST00000496030 ZNF394Q53GI3 561 aa12.64□□□□□ -0.39
APTX-233ENST00000496030 PPM1LQ5SGD2 360 aa12.64□□□□□ -0.39
APTX-233ENST00000496030 LIN9Q5TKA1 542 aa12.64□□□□□ -0.39
APTX-233ENST00000496030 SPATA2LQ8IUW3 424 aaPredicted RBP12.64□□□□□ -0.39
APTX-233ENST00000496030 RNF214Q8ND24 703 aa12.64□□□□□ -0.39
APTX-233ENST00000496030 TFAP2BQ92481 460 aa12.64□□□□□ -0.39
APTX-233ENST00000496030 SHC3Q92529 594 aa12.64□□□□□ -0.39
APTX-233ENST00000496030 TMEM176AQ96HP8 235 aa12.64□□□□□ -0.39
APTX-233ENST00000496030 TNIP3Q96KP6 325 aa12.64□□□□□ -0.39
APTX-233ENST00000496030 HNRNPABQ99729 332 aaKnown RBP12.64□□□□□ -0.39
APTX-233ENST00000496030 LSM14BQ9BX40 385 aaKnown RBP12.64□□□□□ -0.39
APTX-233ENST00000496030 LRRC3Q9BY71 257 aa12.64□□□□□ -0.39
APTX-233ENST00000496030 ZNF518BQ9C0D4 1074 aa12.64□□□□□ -0.39
APTX-233ENST00000496030 GPR88Q9GZN0 384 aa12.64□□□□□ -0.39
APTX-233ENST00000496030 RBSNQ9H1K0 784 aa12.64□□□□□ -0.39
APTX-233ENST00000496030 ABI2Q9NYB9 513 aaPredicted RBP12.64□□□□□ -0.39
APTX-233ENST00000496030 DLL3Q9NYJ7 618 aa12.64□□□□□ -0.39
APTX-233ENST00000496030 LIMD1Q9UGP4 676 aa12.64□□□□□ -0.39
APTX-233ENST00000496030 DNAJC12Q9UKB3 198 aa12.64□□□□□ -0.39
APTX-233ENST00000496030 DENND4AQ7Z401 1863 aa12.63□□□□□ -0.39
APTX-233ENST00000496030 GREB1Q4ZG55 1949 aa12.63□□□□□ -0.39
APTX-233ENST00000496030 GOLGA6L19H0YKK7 550 aa12.63□□□□□ -0.39
APTX-233ENST00000496030 FOXN3O00409 490 aaPredicted RBP12.63□□□□□ -0.39
APTX-233ENST00000496030 NRG2O14511 850 aaPredicted RBP12.63□□□□□ -0.39
APTX-233ENST00000496030 LMNAP02545 664 aaKnown RBP12.63□□□□□ -0.39
APTX-233ENST00000496030 UCHL3P15374 230 aa12.63□□□□□ -0.39
APTX-233ENST00000496030 BDNFP23560 247 aa12.63□□□□□ -0.39
APTX-233ENST00000496030 PBX1P40424 430 aa12.63□□□□□ -0.39
APTX-233ENST00000496030 TUFMP49411 452 aaKnown RBP12.63□□□□□ -0.39
APTX-233ENST00000496030 MFAP3P55082 362 aa12.63□□□□□ -0.39
APTX-233ENST00000496030 CYP27A1Q02318 531 aa12.63□□□□□ -0.39
APTX-233ENST00000496030 TWF1Q12792 350 aa12.63□□□□□ -0.39
APTX-233ENST00000496030 DDR2Q16832 855 aa12.63□□□□□ -0.39
APTX-233ENST00000496030 FKBP15Q5T1M5 1219 aa12.63□□□□□ -0.39
APTX-233ENST00000496030 TMEM270Q6UE05 265 aa12.63□□□□□ -0.39
APTX-233ENST00000496030 CYP26C1Q6V0L0 522 aa12.63□□□□□ -0.39
APTX-233ENST00000496030 C4orf50Q6ZRC1 276 aa12.63□□□□□ -0.39
APTX-233ENST00000496030 ENOSF1Q7L5Y1 443 aa12.63□□□□□ -0.39
APTX-233ENST00000496030 DTWD2Q8NBA8 298 aa12.63□□□□□ -0.39
APTX-233ENST00000496030 SLC2A14Q8TDB8 520 aa12.63□□□□□ -0.39
APTX-233ENST00000496030 SMG7Q92540 1137 aaKnown RBP12.63□□□□□ -0.39
APTX-233ENST00000496030 FAM49BQ9NUQ9 324 aa12.63□□□□□ -0.39
APTX-233ENST00000496030 HCFC1R1Q9NWW0 138 aa12.63□□□□□ -0.39
APTX-233ENST00000496030 DNMT3BQ9UBC3 853 aaKnown RBP12.63□□□□□ -0.39
APTX-233ENST00000496030 PCDHB4Q9Y5E5 795 aa12.63□□□□□ -0.39
APTX-233ENST00000496030 FHOD1Q9Y613 1164 aa12.63□□□□□ -0.39
APTX-233ENST00000496030 AP5Z1O43299 807 aa12.62□□□□□ -0.39
APTX-233ENST00000496030 BEST1O76090 585 aa12.62□□□□□ -0.39
APTX-233ENST00000496030 TPM2P07951 284 aa12.62□□□□□ -0.39
APTX-233ENST00000496030 PAEPP09466 180 aa12.62□□□□□ -0.39
APTX-233ENST00000496030 HMGA1P17096 107 aaKnown RBP12.62□□□□□ -0.39
APTX-233ENST00000496030 YWHAEP62258 255 aaKnown RBP12.62□□□□□ -0.39
APTX-233ENST00000496030 NTHL1P78549 312 aa12.62□□□□□ -0.39
APTX-233ENST00000496030 MAPK8IP2Q13387 824 aaPredicted RBP12.62□□□□□ -0.39
APTX-233ENST00000496030 ARHGAP44Q17R89 818 aa12.62□□□□□ -0.39
APTX-233ENST00000496030 MGAT5BQ3V5L5 792 aa12.62□□□□□ -0.39
APTX-233ENST00000496030 PPP1R26Q5T8A7 1209 aaPredicted RBP12.62□□□□□ -0.39
APTX-233ENST00000496030 SDHAF4Q5VUM1 108 aa12.62□□□□□ -0.39
APTX-233ENST00000496030 ARHGAP17Q68EM7 881 aa12.62□□□□□ -0.39
APTX-233ENST00000496030 SMYD5Q6GMV2 418 aa12.62□□□□□ -0.39
APTX-233ENST00000496030 ELMSAN1Q6PJG2 1045 aa12.62□□□□□ -0.39
APTX-233ENST00000496030 POTEHQ6S545 545 aa12.62□□□□□ -0.39
APTX-233ENST00000496030 VSTM1Q6UX27 236 aa12.62□□□□□ -0.39
APTX-233ENST00000496030 FAM35AQ86V20 835 aa12.62□□□□□ -0.39
APTX-233ENST00000496030 FAM71AQ8IYT1 594 aa12.62□□□□□ -0.39
APTX-233ENST00000496030 DCLK2Q8N568 766 aa12.62□□□□□ -0.39
APTX-233ENST00000496030 RBBP8NLQ8NC74 664 aaPredicted RBP12.62□□□□□ -0.39
APTX-233ENST00000496030 ZMIZ2Q8NF64 920 aa12.62□□□□□ -0.39
APTX-233ENST00000496030 GPR152Q8TDT2 470 aa12.62□□□□□ -0.39
APTX-233ENST00000496030 CYFIP2Q96F07 1278 aa12.62□□□□□ -0.39
APTX-233ENST00000496030 FAM81BQ96LP2 452 aa12.62□□□□□ -0.39
APTX-233ENST00000496030 HEXIM2Q96MH2 286 aaKnown RBP12.62□□□□□ -0.39
APTX-233ENST00000496030 KCNK16Q96T55 309 aa12.62□□□□□ -0.39
APTX-233ENST00000496030 SEPT5Q99719 369 aaPredicted RBP12.62□□□□□ -0.39
APTX-233ENST00000496030 SMOQ99835 787 aa12.62□□□□□ -0.39
APTX-233ENST00000496030 CSNK1G1Q9HCP0 422 aa12.62□□□□□ -0.39
APTX-233ENST00000496030 ACP6Q9NPH0 428 aa12.62□□□□□ -0.39
APTX-233ENST00000496030 FAM207AQ9NSI2 230 aaPredicted RBP12.62□□□□□ -0.39
APTX-233ENST00000496030 DOCK8Q8NF50 2099 aa12.61□□□□□ -0.39
APTX-233ENST00000496030 A0A1W2PQC6 194 aa12.61□□□□□ -0.39
APTX-233ENST00000496030 SERPINC1P01008 464 aa12.61□□□□□ -0.39
APTX-233ENST00000496030 LRG1P02750 347 aa12.61□□□□□ -0.39
APTX-233ENST00000496030 PNMA6AP0CW24 399 aaPredicted RBP12.61□□□□□ -0.39
APTX-233ENST00000496030 CLCN1P35523 988 aa12.61□□□□□ -0.39
APTX-233ENST00000496030 ALDH1A3P47895 512 aa12.61□□□□□ -0.39
APTX-233ENST00000496030 EPHA5P54756 1037 aa12.61□□□□□ -0.39
APTX-233ENST00000496030 JAM2P57087 298 aa12.61□□□□□ -0.39
APTX-233ENST00000496030 TPM4P67936 248 aa12.61□□□□□ -0.39
APTX-233ENST00000496030 DRAP1Q14919 205 aaPredicted RBP12.61□□□□□ -0.39
APTX-233ENST00000496030 ATAT1Q5SQI0 421 aa12.61□□□□□ -0.39
APTX-233ENST00000496030 CES5AQ6NT32 575 aa12.61□□□□□ -0.39
APTX-233ENST00000496030 GRASPQ7Z6J2 395 aaPredicted RBP12.61□□□□□ -0.39
APTX-233ENST00000496030 DNAJB7Q7Z6W7 309 aaPredicted RBP12.61□□□□□ -0.39
APTX-233ENST00000496030 TMC8Q8IU68 726 aa12.61□□□□□ -0.39
APTX-233ENST00000496030 ZDHHC14Q8IZN3 488 aa12.61□□□□□ -0.39
APTX-233ENST00000496030 HS6ST3Q8IZP7 471 aa12.61□□□□□ -0.39
APTX-233ENST00000496030 STKLD1Q8NE28 680 aa12.61□□□□□ -0.39
APTX-233ENST00000496030 GIPC2Q8TF65 315 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms