RNA–Protein interactions for RNA: ENST00000495643.1

DCTN1-223, Transcript of dynactin subunit 1, human

TSL 3

Gene DCTN1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCTN1-223	ENST00000495643	DHTKD1	Q96HY7	919 aa	Predicted RBP	11.65	□□□□□ -0.54
DCTN1-223	ENST00000495643	ZFYVE19	Q96K21	471 aa		11.65	□□□□□ -0.54
DCTN1-223	ENST00000495643	SLC22A12	Q96S37	553 aa		11.65	□□□□□ -0.54
DCTN1-223	ENST00000495643	DUSP9	Q99956	384 aa	Known RBP	11.65	□□□□□ -0.54
DCTN1-223	ENST00000495643	MMRN2	Q9H8L6	949 aa		11.65	□□□□□ -0.54
DCTN1-223	ENST00000495643	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	11.65	□□□□□ -0.54
DCTN1-223	ENST00000495643	TDP1	Q9NUW8	608 aa		11.65	□□□□□ -0.54
DCTN1-223	ENST00000495643	FAM86C1	Q9NVL1	165 aa		11.65	□□□□□ -0.54
DCTN1-223	ENST00000495643	GCNT4	Q9P109	453 aa		11.65	□□□□□ -0.54
DCTN1-223	ENST00000495643	HMGXB4	Q9UGU5	601 aa		11.65	□□□□□ -0.54
DCTN1-223	ENST00000495643	MYO15A	Q9UKN7	3530 aa		11.65	□□□□□ -0.54
DCTN1-223	ENST00000495643	MYH10	P35580	1976 aa		11.65	□□□□□ -0.55
DCTN1-223	ENST00000495643	CACNA1I	Q9P0X4	2223 aa		11.64	□□□□□ -0.55
DCTN1-223	ENST00000495643	C2orf78	A6NCI8	922 aa		11.64	□□□□□ -0.55
DCTN1-223	ENST00000495643	MAN2B1	O00754	1011 aa		11.64	□□□□□ -0.55
DCTN1-223	ENST00000495643	PSMA7	O14818	248 aa		11.64	□□□□□ -0.55
DCTN1-223	ENST00000495643	STX10	O60499	249 aa		11.64	□□□□□ -0.55
DCTN1-223	ENST00000495643	RPS9	P46781	194 aa	Known RBP	11.64	□□□□□ -0.55
DCTN1-223	ENST00000495643	UBE2H	P62256	183 aa		11.64	□□□□□ -0.55
DCTN1-223	ENST00000495643	PLCB2	Q00722	1185 aa		11.64	□□□□□ -0.55
DCTN1-223	ENST00000495643	ORC1	Q13415	861 aa		11.64	□□□□□ -0.55
DCTN1-223	ENST00000495643	STIM1	Q13586	685 aa		11.64	□□□□□ -0.55
DCTN1-223	ENST00000495643	ANGPT1	Q15389	498 aa		11.64	□□□□□ -0.55
DCTN1-223	ENST00000495643	FOXR2	Q6PJQ5	311 aa		11.64	□□□□□ -0.55
DCTN1-223	ENST00000495643	FAM35A	Q86V20	835 aa		11.64	□□□□□ -0.55
DCTN1-223	ENST00000495643	FBXL13	Q8NEE6	735 aa		11.64	□□□□□ -0.55
DCTN1-223	ENST00000495643	RIN3	Q8TB24	985 aa		11.64	□□□□□ -0.55
DCTN1-223	ENST00000495643	WHAMM	Q8TF30	809 aa		11.64	□□□□□ -0.55
DCTN1-223	ENST00000495643	CYP2S1	Q96SQ9	504 aa		11.64	□□□□□ -0.55
DCTN1-223	ENST00000495643	KCNK16	Q96T55	309 aa		11.64	□□□□□ -0.55
DCTN1-223	ENST00000495643	FAM83C	Q9BQN1	747 aa		11.64	□□□□□ -0.55
DCTN1-223	ENST00000495643	IMPG2	Q9BZV3	1241 aa		11.64	□□□□□ -0.55
DCTN1-223	ENST00000495643	NIF3L1	Q9GZT8	377 aa		11.64	□□□□□ -0.55
DCTN1-223	ENST00000495643	KIF9	Q9HAQ2	790 aa		11.64	□□□□□ -0.55
DCTN1-223	ENST00000495643	CYP3A43	Q9HB55	503 aa		11.64	□□□□□ -0.55
DCTN1-223	ENST00000495643	IL37	Q9NZH6	218 aa		11.64	□□□□□ -0.55
DCTN1-223	ENST00000495643	MRPS17	Q9Y2R5	130 aa	Known RBP	11.64	□□□□□ -0.55
DCTN1-223	ENST00000495643	COQ4	Q9Y3A0	265 aa		11.64	□□□□□ -0.55
DCTN1-223	ENST00000495643	PIAS3	Q9Y6X2	628 aa		11.64	□□□□□ -0.55
DCTN1-223	ENST00000495643	DMD	P11532	3685 aa		11.64	□□□□□ -0.55
DCTN1-223	ENST00000495643	ATP8B3	O60423	1300 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	TRAV19	A0A0A6YYK7	116 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	PROB1	E7EW31	1015 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	TNFRSF10B	O14763	440 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	USP17L7	P0C7H9	530 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	CCDC130	P13994	396 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	PPP1R2	P41236	205 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	NBL1	P41271	181 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	MAGEA9	P43362	315 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	MRE11	P49959	708 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	MXI1	P50539	228 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	CBWD6	Q4V339	395 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	CBWD3	Q5JTY5	395 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	CBWD5	Q5RIA9	395 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	TTI2	Q6NXR4	508 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	FILIP1	Q7Z7B0	1213 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	ALYREF	Q86V81	257 aa	Known RBP	11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	C1orf210	Q8IVY1	113 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	MAML2	Q8IZL2	1156 aa	Predicted RBP	11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	NUP93	Q8N1F7	819 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	C12orf29	Q8N999	325 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	CSGALNACT1	Q8TDX6	532 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	FAM3C	Q92520	227 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	SLC35C1	Q96A29	364 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	SMARCD1	Q96GM5	515 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	FAXDC2	Q96IV6	333 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	TWNK	Q96RR1	684 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	SMO	Q99835	787 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	MED10	Q9BTT4	135 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	C8orf33	Q9H7E9	229 aa	Predicted RBP	11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	CSNK1G1	Q9HCP0	422 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	TRPC7	Q9HCX4	862 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	GKN1	Q9NS71	199 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	THG1L	Q9NWX6	298 aa	Known RBP	11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	RAB20	Q9NX57	234 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	GTSE1	Q9NYZ3	720 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	EHD2	Q9NZN4	543 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	TRPM5	Q9NZQ8	1165 aa		11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	ARMCX3	Q9UH62	379 aa	Predicted RBP	11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	11.63	□□□□□ -0.55
DCTN1-223	ENST00000495643	FANCM	Q8IYD8	2048 aa		11.62	□□□□□ -0.55
DCTN1-223	ENST00000495643	ZNF840P	A6NDX5	716 aa		11.62	□□□□□ -0.55
DCTN1-223	ENST00000495643	SPECC1L-ADORA2A	F8WAN1	911 aa		11.62	□□□□□ -0.55
DCTN1-223	ENST00000495643	BIN1	O00499	593 aa		11.62	□□□□□ -0.55
DCTN1-223	ENST00000495643	NCAM2	O15394	837 aa		11.62	□□□□□ -0.55
DCTN1-223	ENST00000495643	CILP	O75339	1184 aa		11.62	□□□□□ -0.55
DCTN1-223	ENST00000495643	AP1G2	O75843	785 aa		11.62	□□□□□ -0.55
DCTN1-223	ENST00000495643	BEST1	O76090	585 aa		11.62	□□□□□ -0.55
DCTN1-223	ENST00000495643	RTN3	O95197	1032 aa	Predicted RBP	11.62	□□□□□ -0.55
DCTN1-223	ENST00000495643	TCF3	P15923	654 aa		11.62	□□□□□ -0.55
DCTN1-223	ENST00000495643	PFKL	P17858	780 aa		11.62	□□□□□ -0.55
DCTN1-223	ENST00000495643	HDC	P19113	662 aa		11.62	□□□□□ -0.55
DCTN1-223	ENST00000495643	ANP32A	P39687	249 aa	Known RBP	11.62	□□□□□ -0.55
DCTN1-223	ENST00000495643	SOX9	P48436	509 aa		11.62	□□□□□ -0.55
DCTN1-223	ENST00000495643	PPP3CC	P48454	512 aa		11.62	□□□□□ -0.55
DCTN1-223	ENST00000495643	KPNA1	P52294	538 aa	Predicted RBP	11.62	□□□□□ -0.55
DCTN1-223	ENST00000495643	TNK2	Q07912	1038 aa		11.62	□□□□□ -0.55
DCTN1-223	ENST00000495643	TAF10	Q12962	218 aa		11.62	□□□□□ -0.55
DCTN1-223	ENST00000495643	ZNF77	Q15935	545 aa		11.62	□□□□□ -0.55
DCTN1-223	ENST00000495643	WDR44	Q5JSH3	913 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms