RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, human

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM53-209	ENST00000495630	SLC7A9	P82251	487 aa		18.77	■□□□□ 0.6
TMEM53-209	ENST00000495630	LMAN2	Q12907	356 aa		18.77	■□□□□ 0.6
TMEM53-209	ENST00000495630	ALCAM	Q13740	583 aa		18.77	■□□□□ 0.6
TMEM53-209	ENST00000495630	CCDC142	Q17RM4	750 aa		18.77	■□□□□ 0.6
TMEM53-209	ENST00000495630	GAB4	Q2WGN9	574 aa		18.77	■□□□□ 0.6
TMEM53-209	ENST00000495630	USP49	Q70CQ1	688 aa		18.77	■□□□□ 0.6
TMEM53-209	ENST00000495630	SV2B	Q7L1I2	683 aa		18.77	■□□□□ 0.6
TMEM53-209	ENST00000495630	LPCAT2	Q7L5N7	544 aa		18.77	■□□□□ 0.6
TMEM53-209	ENST00000495630	MDGA1	Q8NFP4	955 aa		18.77	■□□□□ 0.6
TMEM53-209	ENST00000495630	PIGK	Q92643	395 aa		18.77	■□□□□ 0.6
TMEM53-209	ENST00000495630	SYT15	Q9BQS2	421 aa		18.77	■□□□□ 0.6
TMEM53-209	ENST00000495630	OLFML3	Q9NRN5	406 aa		18.77	■□□□□ 0.6
TMEM53-209	ENST00000495630	TBC1D7	Q9P0N9	293 aa		18.77	■□□□□ 0.6
TMEM53-209	ENST00000495630	RALY	Q9UKM9	306 aa	Known RBP	18.77	■□□□□ 0.6
TMEM53-209	ENST00000495630	SMC3	Q9UQE7	1217 aa		18.77	■□□□□ 0.6
TMEM53-209	ENST00000495630	GOLGA8IP	A6NC78	632 aa		18.76	■□□□□ 0.59
TMEM53-209	ENST00000495630	ZNF840P	A6NDX5	716 aa		18.76	■□□□□ 0.59
TMEM53-209	ENST00000495630	GOLGA8J	A6NMD2	632 aa		18.76	■□□□□ 0.59
TMEM53-209	ENST00000495630	PATE3	B3GLJ2	98 aa		18.76	■□□□□ 0.59
TMEM53-209	ENST00000495630	GCNT3	O95395	438 aa		18.76	■□□□□ 0.59
TMEM53-209	ENST00000495630	TMEM191B	P0C7N4	346 aa		18.76	■□□□□ 0.59
TMEM53-209	ENST00000495630	BDNF	P23560	247 aa		18.76	■□□□□ 0.59
TMEM53-209	ENST00000495630	LMO2	P25791	158 aa		18.76	■□□□□ 0.59
TMEM53-209	ENST00000495630	RRAGB	Q5VZM2	374 aa		18.76	■□□□□ 0.59
TMEM53-209	ENST00000495630	DENND5B	Q6ZUT9	1274 aa		18.76	■□□□□ 0.59
TMEM53-209	ENST00000495630	HPDL	Q96IR7	371 aa		18.76	■□□□□ 0.59
TMEM53-209	ENST00000495630	ANKRD36BP1	Q96IX9	119 aa		18.76	■□□□□ 0.59
TMEM53-209	ENST00000495630	PNKP	Q96T60	521 aa		18.76	■□□□□ 0.59
TMEM53-209	ENST00000495630	TTLL2	Q9BWV7	592 aa		18.76	■□□□□ 0.59
TMEM53-209	ENST00000495630	ADAM33	Q9BZ11	813 aa		18.76	■□□□□ 0.59
TMEM53-209	ENST00000495630	RNF38	Q9H0F5	515 aa		18.76	■□□□□ 0.59
TMEM53-209	ENST00000495630	TCHH	Q07283	1943 aa		18.76	■□□□□ 0.59
TMEM53-209	ENST00000495630	TNFRSF10B	O14763	440 aa		18.75	■□□□□ 0.59
TMEM53-209	ENST00000495630	KIAA0391	O15091	583 aa	Known RBP	18.75	■□□□□ 0.59
TMEM53-209	ENST00000495630	MAP3K13	O43283	966 aa		18.75	■□□□□ 0.59
TMEM53-209	ENST00000495630	ANXA13	P27216	316 aa		18.75	■□□□□ 0.59
TMEM53-209	ENST00000495630	EIF2D	P41214	584 aa	Known RBP	18.75	■□□□□ 0.59
TMEM53-209	ENST00000495630	P2RY2	P41231	377 aa		18.75	■□□□□ 0.59
TMEM53-209	ENST00000495630	BYSL	Q13895	437 aa	Known RBP	18.75	■□□□□ 0.59
TMEM53-209	ENST00000495630	DHCR24	Q15392	516 aa		18.75	■□□□□ 0.59
TMEM53-209	ENST00000495630	SURF1	Q15526	300 aa		18.75	■□□□□ 0.59
TMEM53-209	ENST00000495630	DUOXA2	Q1HG44	320 aa		18.75	■□□□□ 0.59
TMEM53-209	ENST00000495630	UAP1L1	Q3KQV9	507 aa		18.75	■□□□□ 0.59
TMEM53-209	ENST00000495630	SPDYC	Q5MJ68	293 aa		18.75	■□□□□ 0.59
TMEM53-209	ENST00000495630	TMEM92	Q6UXU6	159 aa		18.75	■□□□□ 0.59
TMEM53-209	ENST00000495630	FILIP1	Q7Z7B0	1213 aa		18.75	■□□□□ 0.59
TMEM53-209	ENST00000495630	KBTBD7	Q8WVZ9	684 aa		18.75	■□□□□ 0.59
TMEM53-209	ENST00000495630	MYLPF	Q96A32	169 aa		18.75	■□□□□ 0.59
TMEM53-209	ENST00000495630	CBWD1	Q9BRT8	395 aa		18.75	■□□□□ 0.59
TMEM53-209	ENST00000495630	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	18.75	■□□□□ 0.59
TMEM53-209	ENST00000495630	NUSAP1	Q9BXS6	441 aa	Known RBP	18.75	■□□□□ 0.59
TMEM53-209	ENST00000495630	MTMR12	Q9C0I1	747 aa		18.75	■□□□□ 0.59
TMEM53-209	ENST00000495630	PCIF1	Q9H4Z3	704 aa		18.75	■□□□□ 0.59
TMEM53-209	ENST00000495630	CRTAC1	Q9NQ79	661 aa		18.75	■□□□□ 0.59
TMEM53-209	ENST00000495630	INTS13	Q9NVM9	706 aa		18.75	■□□□□ 0.59
TMEM53-209	ENST00000495630	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	18.75	■□□□□ 0.59
TMEM53-209	ENST00000495630	FAM208B	Q5VWN6	2430 aa		18.74	■□□□□ 0.59
TMEM53-209	ENST00000495630	OBSL1	O75147	1896 aa		18.74	■□□□□ 0.59
TMEM53-209	ENST00000495630	ANTXRL	A6NF34	631 aa		18.74	■□□□□ 0.59
TMEM53-209	ENST00000495630	TRIM66	O15016	1216 aa		18.74	■□□□□ 0.59
TMEM53-209	ENST00000495630	APOD	P05090	189 aa		18.74	■□□□□ 0.59
TMEM53-209	ENST00000495630	CYP17A1	P05093	508 aa		18.74	■□□□□ 0.59
TMEM53-209	ENST00000495630	PDGFRB	P09619	1106 aa		18.74	■□□□□ 0.59
TMEM53-209	ENST00000495630	FAM163B	P0C2L3	166 aa		18.74	■□□□□ 0.59
TMEM53-209	ENST00000495630	SPINK2	P20155	84 aa		18.74	■□□□□ 0.59
TMEM53-209	ENST00000495630	WARS	P23381	471 aa	Known RBP	18.74	■□□□□ 0.59
TMEM53-209	ENST00000495630	DPP6	P42658	865 aa		18.74	■□□□□ 0.59
TMEM53-209	ENST00000495630	TNFRSF4	P43489	277 aa		18.74	■□□□□ 0.59
TMEM53-209	ENST00000495630	SLC6A11	P48066	632 aa		18.74	■□□□□ 0.59
TMEM53-209	ENST00000495630	CASP5	P51878	434 aa		18.74	■□□□□ 0.59
TMEM53-209	ENST00000495630	USP46	P62068	366 aa		18.74	■□□□□ 0.59
TMEM53-209	ENST00000495630	NOP14	P78316	857 aa	Known RBP	18.74	■□□□□ 0.59
TMEM53-209	ENST00000495630	EOGT	Q5NDL2	527 aa		18.74	■□□□□ 0.59
TMEM53-209	ENST00000495630	LMBRD2	Q68DH5	695 aa	Predicted RBP	18.74	■□□□□ 0.59
TMEM53-209	ENST00000495630	TTC30A	Q86WT1	665 aa		18.74	■□□□□ 0.59
TMEM53-209	ENST00000495630	SYT12	Q8IV01	421 aa		18.74	■□□□□ 0.59
TMEM53-209	ENST00000495630	GPD1L	Q8N335	351 aa		18.74	■□□□□ 0.59
TMEM53-209	ENST00000495630	IL17RC	Q8NAC3	791 aa		18.74	■□□□□ 0.59
TMEM53-209	ENST00000495630	MYCBPAP	Q8TBZ2	947 aa		18.74	■□□□□ 0.59
TMEM53-209	ENST00000495630	WHAMM	Q8TF30	809 aa		18.74	■□□□□ 0.59
TMEM53-209	ENST00000495630	SPACA7	Q96KW9	195 aa		18.74	■□□□□ 0.59
TMEM53-209	ENST00000495630	C8orf48	Q96LL4	319 aa		18.74	■□□□□ 0.59
TMEM53-209	ENST00000495630	SLC32A1	Q9H598	525 aa		18.74	■□□□□ 0.59
TMEM53-209	ENST00000495630	POLM	Q9NP87	494 aa	Predicted RBP	18.74	■□□□□ 0.59
TMEM53-209	ENST00000495630	SRPRB	Q9Y5M8	271 aa	Known RBP	18.74	■□□□□ 0.59
TMEM53-209	ENST00000495630	ZNF233	A6NK53	670 aa		18.73	■□□□□ 0.59
TMEM53-209	ENST00000495630	KAT7	O95251	611 aa		18.73	■□□□□ 0.59
TMEM53-209	ENST00000495630	KLF8	O95600	359 aa	Predicted RBP	18.73	■□□□□ 0.59
TMEM53-209	ENST00000495630	OLFM2	O95897	454 aa		18.73	■□□□□ 0.59
TMEM53-209	ENST00000495630	TOP3B	O95985	862 aa	Known RBP	18.73	■□□□□ 0.59
TMEM53-209	ENST00000495630	TNNC2	P02585	160 aa		18.73	■□□□□ 0.59
TMEM53-209	ENST00000495630	IDE	P14735	1019 aa		18.73	■□□□□ 0.59
TMEM53-209	ENST00000495630	HNRNPL	P14866	589 aa	Known RBP eCLIP	18.73	■□□□□ 0.59
TMEM53-209	ENST00000495630	GRIA2	P42262	883 aa		18.73	■□□□□ 0.59
TMEM53-209	ENST00000495630	PSMC1	P62191	440 aa	Known RBP	18.73	■□□□□ 0.59
TMEM53-209	ENST00000495630	CYP27A1	Q02318	531 aa		18.73	■□□□□ 0.59
TMEM53-209	ENST00000495630	TRIM61	Q5EBN2	209 aa		18.73	■□□□□ 0.59
TMEM53-209	ENST00000495630	RHBDF2	Q6PJF5	856 aa		18.73	■□□□□ 0.59
TMEM53-209	ENST00000495630	ALLC	Q8N6M5	410 aa		18.73	■□□□□ 0.59
TMEM53-209	ENST00000495630	TXNDC5	Q8NBS9	432 aa	Known RBP	18.73	■□□□□ 0.59

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