RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 BEX3Q00994 111 aa7.49□□□□□ -1.21
VIM-207ENST00000495528 SRSF2Q01130 221 aaKnown RBP7.49□□□□□ -1.21
VIM-207ENST00000495528 CNTN2Q02246 1040 aa7.49□□□□□ -1.21
VIM-207ENST00000495528 KLF1Q13351 362 aaPredicted RBP7.49□□□□□ -1.21
VIM-207ENST00000495528 FBLN7Q53RD9 439 aa7.49□□□□□ -1.21
VIM-207ENST00000495528 ZSCAN25Q6NSZ9 544 aa7.49□□□□□ -1.21
VIM-207ENST00000495528 ARMCX2Q7L311 632 aa7.49□□□□□ -1.21
VIM-207ENST00000495528 SKAP1Q86WV1 359 aa7.49□□□□□ -1.21
VIM-207ENST00000495528 SMC5Q8IY18 1101 aa7.49□□□□□ -1.21
VIM-207ENST00000495528 TMEM199Q8N511 208 aa7.49□□□□□ -1.21
VIM-207ENST00000495528 NKD2Q969F2 451 aaPredicted RBP7.49□□□□□ -1.21
VIM-207ENST00000495528 GFM2Q969S9 779 aaKnown RBP7.49□□□□□ -1.21
VIM-207ENST00000495528 LRRC37BQ96QE4 947 aa7.49□□□□□ -1.21
VIM-207ENST00000495528 HAPLN2Q9GZV7 340 aa7.49□□□□□ -1.21
VIM-207ENST00000495528 WNT8AQ9H1J5 351 aa7.49□□□□□ -1.21
VIM-207ENST00000495528 SLC38A10Q9HBR0 1119 aa7.49□□□□□ -1.21
VIM-207ENST00000495528 DNAJC28Q9NX36 388 aa7.49□□□□□ -1.21
VIM-207ENST00000495528 ARPP21Q9UBL0 812 aaPredicted RBP7.49□□□□□ -1.21
VIM-207ENST00000495528 DPP7Q9UHL4 492 aa7.49□□□□□ -1.21
VIM-207ENST00000495528 RAPGEFL1Q9UHV5 662 aa7.49□□□□□ -1.21
VIM-207ENST00000495528 EVLQ9UI08 416 aaPredicted RBP7.49□□□□□ -1.21
VIM-207ENST00000495528 SLC4A7Q9Y6M7 1214 aa7.49□□□□□ -1.21
VIM-207ENST00000495528 UMODL1Q5DID0 1318 aa7.49□□□□□ -1.21
VIM-207ENST00000495528 MROH7Q68CQ1 1323 aa7.49□□□□□ -1.21
VIM-207ENST00000495528 C2orf78A6NCI8 922 aa7.48□□□□□ -1.21
VIM-207ENST00000495528 ARHGAP6O43182 974 aa7.48□□□□□ -1.21
VIM-207ENST00000495528 LAMTOR5O43504 91 aa7.48□□□□□ -1.21
VIM-207ENST00000495528 PRDM1O75626 825 aa7.48□□□□□ -1.21
VIM-207ENST00000495528 FGBP02675 491 aa7.48□□□□□ -1.21
VIM-207ENST00000495528 MYBL2P10244 700 aa7.48□□□□□ -1.21
VIM-207ENST00000495528 ATP2C1P98194 919 aaPredicted RBP7.48□□□□□ -1.21
VIM-207ENST00000495528 NUCB1Q02818 461 aa7.48□□□□□ -1.21
VIM-207ENST00000495528 MGAT5Q09328 741 aa7.48□□□□□ -1.21
VIM-207ENST00000495528 CLUL1Q15846 466 aa7.48□□□□□ -1.21
VIM-207ENST00000495528 BRDTQ58F21 947 aaPredicted RBP7.48□□□□□ -1.21
VIM-207ENST00000495528 AKNAD1Q5T1N1 836 aa7.48□□□□□ -1.21
VIM-207ENST00000495528 SYDE2Q5VT97 1194 aa7.48□□□□□ -1.21
VIM-207ENST00000495528 PGM2L1Q6PCE3 622 aa7.48□□□□□ -1.21
VIM-207ENST00000495528 PSRC1Q6PGN9 363 aaPredicted RBP7.48□□□□□ -1.21
VIM-207ENST00000495528 CCDC174Q6PII3 467 aa7.48□□□□□ -1.21
VIM-207ENST00000495528 TTLL10Q6ZVT0 673 aa7.48□□□□□ -1.21
VIM-207ENST00000495528 CHD1LQ86WJ1 897 aa7.48□□□□□ -1.21
VIM-207ENST00000495528 ZNF444Q8N0Y2 327 aaPredicted RBP7.48□□□□□ -1.21
VIM-207ENST00000495528 CHST13Q8NET6 341 aa7.48□□□□□ -1.21
VIM-207ENST00000495528 OR14C36Q8NHC7 312 aa7.48□□□□□ -1.21
VIM-207ENST00000495528 ATXN2LQ8WWM7 1075 aaKnown RBP7.48□□□□□ -1.21
VIM-207ENST00000495528 HERVK_113Q902F9 699 aa7.48□□□□□ -1.21
VIM-207ENST00000495528 GCDHQ92947 438 aaPredicted RBP7.48□□□□□ -1.21
VIM-207ENST00000495528 CEP95Q96GE4 821 aa7.48□□□□□ -1.21
VIM-207ENST00000495528 C20orf173Q96LM9 149 aa7.48□□□□□ -1.21
VIM-207ENST00000495528 ASB2Q96Q27 587 aa7.48□□□□□ -1.21
VIM-207ENST00000495528 FDXACB1Q9BRP7 624 aaPredicted RBP7.48□□□□□ -1.21
VIM-207ENST00000495528 LRRCC1Q9C099 1032 aa7.48□□□□□ -1.21
VIM-207ENST00000495528 C12orf65Q9H3J6 166 aaKnown RBP7.48□□□□□ -1.21
VIM-207ENST00000495528 IL23AQ9NPF7 189 aa7.48□□□□□ -1.21
VIM-207ENST00000495528 CCM2LQ9NUG4 571 aaPredicted RBP7.48□□□□□ -1.21
VIM-207ENST00000495528 MTMR4Q9NYA4 1195 aa7.48□□□□□ -1.21
VIM-207ENST00000495528 FEM1BQ9UK73 627 aa7.48□□□□□ -1.21
VIM-207ENST00000495528 VWA7Q9Y334 891 aa7.48□□□□□ -1.21
VIM-207ENST00000495528 CTDP1Q9Y5B0 961 aaPredicted RBP7.48□□□□□ -1.21
VIM-207ENST00000495528 DDX49Q9Y6V7 483 aaKnown RBP7.48□□□□□ -1.21
VIM-207ENST00000495528 ARID1BQ8NFD5 2236 aaPredicted RBP7.48□□□□□ -1.21
VIM-207ENST00000495528 ASTN1O14525 1302 aa7.48□□□□□ -1.21
VIM-207ENST00000495528 GRIN2DO15399 1336 aa7.48□□□□□ -1.21
VIM-207ENST00000495528 DAPK3O43293 454 aa7.47□□□□□ -1.21
VIM-207ENST00000495528 OSMP13725 252 aa7.47□□□□□ -1.21
VIM-207ENST00000495528 RABGGTBP53611 331 aa7.47□□□□□ -1.21
VIM-207ENST00000495528 OAZ1P54368 228 aa7.47□□□□□ -1.21
VIM-207ENST00000495528 CCL23P55773 120 aa7.47□□□□□ -1.21
VIM-207ENST00000495528 SESN2P58004 480 aaPredicted RBP7.47□□□□□ -1.21
VIM-207ENST00000495528 TNFAIP2Q03169 654 aa7.47□□□□□ -1.21
VIM-207ENST00000495528 CD69Q07108 199 aa7.47□□□□□ -1.21
VIM-207ENST00000495528 SPIDRQ14159 915 aa7.47□□□□□ -1.21
VIM-207ENST00000495528 SURF1Q15526 300 aa7.47□□□□□ -1.21
VIM-207ENST00000495528 TMEM63BQ5T3F8 832 aa7.47□□□□□ -1.21
VIM-207ENST00000495528 SLFN13Q68D06 897 aa7.47□□□□□ -1.21
VIM-207ENST00000495528 CXCL17Q6UXB2 119 aa7.47□□□□□ -1.21
VIM-207ENST00000495528 NOL8Q76FK4 1167 aaKnown RBP7.47□□□□□ -1.21
VIM-207ENST00000495528 FAM133AQ8N9E0 248 aa7.47□□□□□ -1.21
VIM-207ENST00000495528 CHMP4CQ96CF2 233 aa7.47□□□□□ -1.21
VIM-207ENST00000495528 UIMC1Q96RL1 719 aa7.47□□□□□ -1.21
VIM-207ENST00000495528 DPYSL5Q9BPU6 564 aa7.47□□□□□ -1.21
VIM-207ENST00000495528 THEGQ9P2T0 379 aa7.47□□□□□ -1.21
VIM-207ENST00000495528 FBXO40Q9UH90 709 aa7.47□□□□□ -1.21
VIM-207ENST00000495528 COL11A1P12107 1806 aaPredicted RBP7.47□□□□□ -1.21
VIM-207ENST00000495528 BAZ2AQ9UIF9 1905 aaKnown RBP7.46□□□□□ -1.21
VIM-207ENST00000495528 PARP14Q460N5 1801 aa7.46□□□□□ -1.21
VIM-207ENST00000495528 TMEM232C9JQI7 657 aa7.46□□□□□ -1.22
VIM-207ENST00000495528 K7ESF4 209 aa7.46□□□□□ -1.22
VIM-207ENST00000495528 RNF113AO15541 343 aaKnown RBP7.46□□□□□ -1.22
VIM-207ENST00000495528 GPAA1O43292 621 aa7.46□□□□□ -1.22
VIM-207ENST00000495528 TTLL1O95922 423 aa7.46□□□□□ -1.22
VIM-207ENST00000495528 MYOGP15173 224 aa7.46□□□□□ -1.22
VIM-207ENST00000495528 TDO2P48775 406 aa7.46□□□□□ -1.22
VIM-207ENST00000495528 RAC3P60763 192 aa7.46□□□□□ -1.22
VIM-207ENST00000495528 SNAP25P60880 206 aa7.46□□□□□ -1.22
VIM-207ENST00000495528 PSMC6P62333 389 aa7.46□□□□□ -1.22
VIM-207ENST00000495528 MRPS5P82675 430 aaKnown RBP7.46□□□□□ -1.22
VIM-207ENST00000495528 ITGA7Q13683 1181 aa7.46□□□□□ -1.22
VIM-207ENST00000495528 RAB30Q15771 203 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms