RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 TTLL2Q9BWV7 592 aa24.81■■□□□ 1.56
COL27A1-208ENST00000494780 SNX25Q9H3E2 840 aa24.81■■□□□ 1.56
COL27A1-208ENST00000494780 AXIN1O15169 862 aa24.8■■□□□ 1.56
COL27A1-208ENST00000494780 EPN2O95208 641 aa24.8■■□□□ 1.56
COL27A1-208ENST00000494780 GNL1P36915 607 aaPredicted RBP24.8■■□□□ 1.56
COL27A1-208ENST00000494780 PPP3CCP48454 512 aa24.8■■□□□ 1.56
COL27A1-208ENST00000494780 CYP24A1Q07973 514 aa24.8■■□□□ 1.56
COL27A1-208ENST00000494780 EHHADHQ08426 723 aa24.8■■□□□ 1.56
COL27A1-208ENST00000494780 SYT13Q7L8C5 426 aa24.8■■□□□ 1.56
COL27A1-208ENST00000494780 KBTBD6Q86V97 674 aa24.8■■□□□ 1.56
COL27A1-208ENST00000494780 RPLP0P6Q8NHW5 317 aa24.8■■□□□ 1.56
COL27A1-208ENST00000494780 SCFD1Q8WVM8 642 aa24.8■■□□□ 1.56
COL27A1-208ENST00000494780 ACDQ96AP0 544 aa24.8■■□□□ 1.56
COL27A1-208ENST00000494780 C8orf48Q96LL4 319 aa24.8■■□□□ 1.56
COL27A1-208ENST00000494780 BACH2Q9BYV9 841 aa24.8■■□□□ 1.56
COL27A1-208ENST00000494780 ARRDC1-AS1Q9H2J1 176 aa24.8■■□□□ 1.56
COL27A1-208ENST00000494780 CLIC2O15247 247 aa24.79■■□□□ 1.56
COL27A1-208ENST00000494780 GDF9O60383 454 aa24.79■■□□□ 1.56
COL27A1-208ENST00000494780 NFATC1O95644 943 aa24.79■■□□□ 1.56
COL27A1-208ENST00000494780 CYP2J2P51589 502 aa24.79■■□□□ 1.56
COL27A1-208ENST00000494780 USP46P62068 366 aa24.79■■□□□ 1.56
COL27A1-208ENST00000494780 NOP14P78316 857 aaKnown RBP24.79■■□□□ 1.56
COL27A1-208ENST00000494780 MDH1BQ5I0G3 518 aa24.79■■□□□ 1.56
COL27A1-208ENST00000494780 HS2ST1Q7LGA3 356 aa24.79■■□□□ 1.56
COL27A1-208ENST00000494780 NELFCDQ8IXH7 590 aa24.79■■□□□ 1.56
COL27A1-208ENST00000494780 KIAA1958Q8N8K9 716 aa24.79■■□□□ 1.56
COL27A1-208ENST00000494780 OR6B3Q8NGW1 331 aa24.79■■□□□ 1.56
COL27A1-208ENST00000494780 CCDC26Q8TAB7 109 aa24.79■■□□□ 1.56
COL27A1-208ENST00000494780 EZH1Q92800 747 aaPredicted RBP24.79■■□□□ 1.56
COL27A1-208ENST00000494780 CCDC127Q96BQ5 260 aa24.79■■□□□ 1.56
COL27A1-208ENST00000494780 ZC3H10Q96K80 434 aaKnown RBP24.79■■□□□ 1.56
COL27A1-208ENST00000494780 LINC00597Q9H2U6 94 aa24.79■■□□□ 1.56
COL27A1-208ENST00000494780 CGNQ9P2M7 1197 aaKnown RBP24.79■■□□□ 1.56
COL27A1-208ENST00000494780 PTPRDP23468 1912 aa24.78■■□□□ 1.56
COL27A1-208ENST00000494780 ATG2BQ96BY7 2078 aa24.78■■□□□ 1.56
COL27A1-208ENST00000494780 STAU1O95793 577 aaKnown RBP24.78■■□□□ 1.56
COL27A1-208ENST00000494780 ZNF806P0C7X5 589 aa24.78■■□□□ 1.56
COL27A1-208ENST00000494780 TNNC1P63316 161 aa24.78■■□□□ 1.56
COL27A1-208ENST00000494780 WDR72Q3MJ13 1102 aa24.78■■□□□ 1.56
COL27A1-208ENST00000494780 HHIPQ96QV1 700 aa24.78■■□□□ 1.56
COL27A1-208ENST00000494780 POLR3BQ9NW08 1133 aaPredicted RBP24.78■■□□□ 1.56
COL27A1-208ENST00000494780 NME7Q9Y5B8 376 aa24.78■■□□□ 1.56
COL27A1-208ENST00000494780 SPAG17Q6Q759 2223 aa24.77■■□□□ 1.56
COL27A1-208ENST00000494780 HELZP42694 1942 aaKnown RBP24.77■■□□□ 1.56
COL27A1-208ENST00000494780 ZNF840PA6NDX5 716 aa24.77■■□□□ 1.56
COL27A1-208ENST00000494780 F8VP50 259 aa24.77■■□□□ 1.56
COL27A1-208ENST00000494780 ADRB1P08588 477 aa24.77■■□□□ 1.56
COL27A1-208ENST00000494780 PTPN1P18031 435 aaKnown RBP24.77■■□□□ 1.56
COL27A1-208ENST00000494780 SLC7A9P82251 487 aa24.77■■□□□ 1.56
COL27A1-208ENST00000494780 TRPC3Q13507 836 aa24.77■■□□□ 1.56
COL27A1-208ENST00000494780 DMC1Q14565 340 aa24.77■■□□□ 1.56
COL27A1-208ENST00000494780 BMT2Q1RMZ1 405 aa24.77■■□□□ 1.56
COL27A1-208ENST00000494780 AASDHQ4L235 1098 aaPredicted RBP24.77■■□□□ 1.56
COL27A1-208ENST00000494780 PPM1JQ5JR12 505 aa24.77■■□□□ 1.56
COL27A1-208ENST00000494780 C12orf56Q8IXR9 622 aa24.77■■□□□ 1.56
COL27A1-208ENST00000494780 DDX1Q92499 740 aaKnown RBP24.77■■□□□ 1.56
COL27A1-208ENST00000494780 ELOVL4Q9GZR5 314 aa24.77■■□□□ 1.56
COL27A1-208ENST00000494780 PCDHGA5Q9Y5G8 931 aa24.77■■□□□ 1.56
COL27A1-208ENST00000494780 LEFTY2O00292 366 aa24.76■■□□□ 1.55
COL27A1-208ENST00000494780 POLR2DO15514 142 aaKnown RBP24.76■■□□□ 1.55
COL27A1-208ENST00000494780 APBB3O95704 486 aa24.76■■□□□ 1.55
COL27A1-208ENST00000494780 PDIA4P13667 645 aaKnown RBP24.76■■□□□ 1.55
COL27A1-208ENST00000494780 ATICP31939 592 aa24.76■■□□□ 1.55
COL27A1-208ENST00000494780 LIMK1P53667 647 aa24.76■■□□□ 1.55
COL27A1-208ENST00000494780 ZXDBP98169 803 aa24.76■■□□□ 1.55
COL27A1-208ENST00000494780 PSMD2Q13200 908 aa24.76■■□□□ 1.55
COL27A1-208ENST00000494780 C12orf50Q8NA57 414 aaPredicted RBP24.76■■□□□ 1.55
COL27A1-208ENST00000494780 ZNF516Q92618 1163 aa24.76■■□□□ 1.55
COL27A1-208ENST00000494780 CNTNAP3BQ96NU0 1288 aa24.76■■□□□ 1.55
COL27A1-208ENST00000494780 CNTNAP3Q9BZ76 1288 aa24.76■■□□□ 1.55
COL27A1-208ENST00000494780 EBF1Q9UH73 591 aa24.76■■□□□ 1.55
COL27A1-208ENST00000494780 PVALEFA0A1B0GWK0 134 aa24.75■■□□□ 1.55
COL27A1-208ENST00000494780 OLFM2O95897 454 aa24.75■■□□□ 1.55
COL27A1-208ENST00000494780 MYL6P60660 151 aa24.75■■□□□ 1.55
COL27A1-208ENST00000494780 SF3A2Q15428 464 aaKnown RBP24.75■■□□□ 1.55
COL27A1-208ENST00000494780 TDRD10Q5VZ19 366 aaKnown RBP24.75■■□□□ 1.55
COL27A1-208ENST00000494780 GZF1Q9H116 711 aaPredicted RBP24.75■■□□□ 1.55
COL27A1-208ENST00000494780 BLZF1Q9H2G9 400 aa24.75■■□□□ 1.55
COL27A1-208ENST00000494780 A8MXQ7 604 aa24.74■■□□□ 1.55
COL27A1-208ENST00000494780 OPRD1P41143 372 aa24.74■■□□□ 1.55
COL27A1-208ENST00000494780 KNOP1Q1ED39 458 aaKnown RBP24.74■■□□□ 1.55
COL27A1-208ENST00000494780 PLK5Q496M5 336 aa24.74■■□□□ 1.55
COL27A1-208ENST00000494780 PLA2G2CQ5R387 149 aa24.74■■□□□ 1.55
COL27A1-208ENST00000494780 IL31Q6EBC2 164 aa24.74■■□□□ 1.55
COL27A1-208ENST00000494780 SNX21Q969T3 373 aa24.74■■□□□ 1.55
COL27A1-208ENST00000494780 SYAP1Q96A49 352 aaPredicted RBP24.74■■□□□ 1.55
COL27A1-208ENST00000494780 SLITRK1Q96PX8 696 aa24.74■■□□□ 1.55
COL27A1-208ENST00000494780 ZNF518BQ9C0D4 1074 aa24.74■■□□□ 1.55
COL27A1-208ENST00000494780 RNF38Q9H0F5 515 aa24.74■■□□□ 1.55
COL27A1-208ENST00000494780 XYLT2Q9H1B5 865 aa24.74■■□□□ 1.55
COL27A1-208ENST00000494780 DPEP3Q9H4B8 488 aa24.74■■□□□ 1.55
COL27A1-208ENST00000494780 SLC39A2Q9NP94 309 aa24.74■■□□□ 1.55
COL27A1-208ENST00000494780 FAM13BQ9NYF5 915 aa24.74■■□□□ 1.55
COL27A1-208ENST00000494780 EML5Q05BV3 1969 aa24.74■■□□□ 1.55
COL27A1-208ENST00000494780 SDK1Q7Z5N4 2213 aa24.74■■□□□ 1.55
COL27A1-208ENST00000494780 KIAA1549LQ6ZVL6 1849 aa24.73■■□□□ 1.55
COL27A1-208ENST00000494780 SLC9A3R1O14745 358 aaPredicted RBP24.73■■□□□ 1.55
COL27A1-208ENST00000494780 EXOC3O60645 756 aa24.73■■□□□ 1.55
COL27A1-208ENST00000494780 OAS1P00973 400 aaKnown RBP24.73■■□□□ 1.55
COL27A1-208ENST00000494780 CASP1P29466 404 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms