RNA–Protein interactions for RNA: ENST00000494486.1

TRIM59-206, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-206ENST00000494486 IPO4Q8TEX9 1081 aaKnown RBP11.85□□□□□ -0.51
TRIM59-206ENST00000494486 ZFRQ96KR1 1074 aaKnown RBP11.85□□□□□ -0.51
TRIM59-206ENST00000494486 TRPC7Q9HCX4 862 aa11.85□□□□□ -0.51
TRIM59-206ENST00000494486 KCNMB3Q9NPA1 279 aa11.85□□□□□ -0.51
TRIM59-206ENST00000494486 WSB2Q9NYS7 404 aaPredicted RBP11.85□□□□□ -0.51
TRIM59-206ENST00000494486 TNFSF13BQ9Y275 285 aa11.85□□□□□ -0.51
TRIM59-206ENST00000494486 SNX11Q9Y5W9 270 aa11.85□□□□□ -0.51
TRIM59-206ENST00000494486 CCDC196A0A1B0GTZ2 297 aa11.84□□□□□ -0.51
TRIM59-206ENST00000494486 DFNA5O60443 496 aa11.84□□□□□ -0.51
TRIM59-206ENST00000494486 USO1O60763 962 aaKnown RBP11.84□□□□□ -0.51
TRIM59-206ENST00000494486 NFICP08651 508 aa11.84□□□□□ -0.51
TRIM59-206ENST00000494486 SFTPCP11686 197 aa11.84□□□□□ -0.51
TRIM59-206ENST00000494486 TNFSF9P41273 254 aa11.84□□□□□ -0.51
TRIM59-206ENST00000494486 CSNK1EP49674 416 aaKnown RBP11.84□□□□□ -0.51
TRIM59-206ENST00000494486 AFF3P51826 1226 aaKnown RBP11.84□□□□□ -0.51
TRIM59-206ENST00000494486 EFNA5P52803 228 aa11.84□□□□□ -0.51
TRIM59-206ENST00000494486 RCAN1P53805 252 aa11.84□□□□□ -0.51
TRIM59-206ENST00000494486 ERVPABLB-1P60509 514 aa11.84□□□□□ -0.51
TRIM59-206ENST00000494486 OSTNP61366 133 aa11.84□□□□□ -0.51
TRIM59-206ENST00000494486 NFKB2Q00653 900 aa11.84□□□□□ -0.51
TRIM59-206ENST00000494486 TEAD4Q15561 434 aa11.84□□□□□ -0.51
TRIM59-206ENST00000494486 NCAPH2Q6IBW4 605 aa11.84□□□□□ -0.51
TRIM59-206ENST00000494486 MAEAQ7L5Y9 396 aa11.84□□□□□ -0.51
TRIM59-206ENST00000494486 METTL3Q86U44 580 aaKnown RBP11.84□□□□□ -0.51
TRIM59-206ENST00000494486 C1orf216Q8TAB5 229 aa11.84□□□□□ -0.51
TRIM59-206ENST00000494486 TOE1Q96GM8 510 aaKnown RBP11.84□□□□□ -0.51
TRIM59-206ENST00000494486 CNDP2Q96KP4 475 aaKnown RBP11.84□□□□□ -0.51
TRIM59-206ENST00000494486 SLC22A12Q96S37 553 aa11.84□□□□□ -0.51
TRIM59-206ENST00000494486 GPR174Q9BXC1 333 aa11.84□□□□□ -0.51
TRIM59-206ENST00000494486 ZCWPW1Q9H0M4 648 aa11.84□□□□□ -0.51
TRIM59-206ENST00000494486 LRRC4CQ9HCJ2 640 aa11.84□□□□□ -0.51
TRIM59-206ENST00000494486 CD248Q9HCU0 757 aa11.84□□□□□ -0.51
TRIM59-206ENST00000494486 BRPF3Q9ULD4 1205 aa11.84□□□□□ -0.51
TRIM59-206ENST00000494486 ARHGAP26Q9UNA1 814 aa11.84□□□□□ -0.51
TRIM59-206ENST00000494486 MAGED2Q9UNF1 606 aaPredicted RBP11.84□□□□□ -0.51
TRIM59-206ENST00000494486 CLCA2Q9UQC9 943 aa11.84□□□□□ -0.51
TRIM59-206ENST00000494486 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.84□□□□□ -0.51
TRIM59-206ENST00000494486 RBM8AQ9Y5S9 174 aaKnown RBP11.84□□□□□ -0.51
TRIM59-206ENST00000494486 SLC9A3R1O14745 358 aaPredicted RBP11.83□□□□□ -0.52
TRIM59-206ENST00000494486 SLC37A4O43826 429 aa11.83□□□□□ -0.52
TRIM59-206ENST00000494486 XRCC6P12956 609 aaKnown RBP eCLIP11.83□□□□□ -0.52
TRIM59-206ENST00000494486 ATP2B1P20020 1258 aa11.83□□□□□ -0.52
TRIM59-206ENST00000494486 POU3F2P20265 443 aaPredicted RBP11.83□□□□□ -0.52
TRIM59-206ENST00000494486 LRPAP1P30533 357 aa11.83□□□□□ -0.52
TRIM59-206ENST00000494486 ADD1P35611 737 aaKnown RBP11.83□□□□□ -0.52
TRIM59-206ENST00000494486 NAMPTP43490 491 aa11.83□□□□□ -0.52
TRIM59-206ENST00000494486 ACADVLP49748 655 aa11.83□□□□□ -0.52
TRIM59-206ENST00000494486 PDE6CP51160 858 aa11.83□□□□□ -0.52
TRIM59-206ENST00000494486 TLE1Q04724 770 aa11.83□□□□□ -0.52
TRIM59-206ENST00000494486 KDSRQ06136 332 aa11.83□□□□□ -0.52
TRIM59-206ENST00000494486 ILKQ13418 452 aa11.83□□□□□ -0.52
TRIM59-206ENST00000494486 DHX32Q7L7V1 743 aaKnown RBP11.83□□□□□ -0.52
TRIM59-206ENST00000494486 FAM26EQ8N5C1 309 aa11.83□□□□□ -0.52
TRIM59-206ENST00000494486 ARL14EPQ8N8R7 260 aaPredicted RBP11.83□□□□□ -0.52
TRIM59-206ENST00000494486 DCBLD1Q8N8Z6 715 aa11.83□□□□□ -0.52
TRIM59-206ENST00000494486 LRRC15Q8TF66 581 aa11.83□□□□□ -0.52
TRIM59-206ENST00000494486 RFFLQ8WZ73 363 aa11.83□□□□□ -0.52
TRIM59-206ENST00000494486 MRGPRX1Q96LB2 322 aa11.83□□□□□ -0.52
TRIM59-206ENST00000494486 CDT1Q9H211 546 aa11.83□□□□□ -0.52
TRIM59-206ENST00000494486 GCNT4Q9P109 453 aa11.83□□□□□ -0.52
TRIM59-206ENST00000494486 EIF2B4Q9UI10 523 aaKnown RBP11.83□□□□□ -0.52
TRIM59-206ENST00000494486 ANKRD6Q9Y2G4 727 aa11.83□□□□□ -0.52
TRIM59-206ENST00000494486 BLACEA4D250 179 aa11.82□□□□□ -0.52
TRIM59-206ENST00000494486 BTBD18B2RXH4 712 aa11.82□□□□□ -0.52
TRIM59-206ENST00000494486 TADA3O75528 432 aa11.82□□□□□ -0.52
TRIM59-206ENST00000494486 DXOO77932 396 aaKnown RBP11.82□□□□□ -0.52
TRIM59-206ENST00000494486 ADH1CP00326 375 aa11.82□□□□□ -0.52
TRIM59-206ENST00000494486 HDCP19113 662 aa11.82□□□□□ -0.52
TRIM59-206ENST00000494486 WASP42768 502 aa11.82□□□□□ -0.52
TRIM59-206ENST00000494486 INHBCP55103 352 aa11.82□□□□□ -0.52
TRIM59-206ENST00000494486 NLRP5P59047 1200 aa11.82□□□□□ -0.52
TRIM59-206ENST00000494486 AKAP17AQ02040 695 aaKnown RBP11.82□□□□□ -0.52
TRIM59-206ENST00000494486 DNAJC3Q13217 504 aa11.82□□□□□ -0.52
TRIM59-206ENST00000494486 HDAC1Q13547 482 aaPredicted RBP11.82□□□□□ -0.52
TRIM59-206ENST00000494486 KCNB1Q14721 858 aa11.82□□□□□ -0.52
TRIM59-206ENST00000494486 PPP2R5AQ15172 486 aa11.82□□□□□ -0.52
TRIM59-206ENST00000494486 INF2Q27J81 1249 aa11.82□□□□□ -0.52
TRIM59-206ENST00000494486 ZC2HC1CQ53FD0 456 aaPredicted RBP11.82□□□□□ -0.52
TRIM59-206ENST00000494486 RHBDF2Q6PJF5 856 aa11.82□□□□□ -0.52
TRIM59-206ENST00000494486 C12orf40Q86WS4 652 aa11.82□□□□□ -0.52
TRIM59-206ENST00000494486 PHTF2Q8N3S3 785 aa11.82□□□□□ -0.52
TRIM59-206ENST00000494486 OR10T2Q8NGX3 314 aa11.82□□□□□ -0.52
TRIM59-206ENST00000494486 TRMT2BQ96GJ1 504 aaKnown RBP11.82□□□□□ -0.52
TRIM59-206ENST00000494486 PHF12Q96QT6 1004 aa11.82□□□□□ -0.52
TRIM59-206ENST00000494486 HSD17B14Q9BPX1 270 aa11.82□□□□□ -0.52
TRIM59-206ENST00000494486 EIF2AK1Q9BQI3 630 aaKnown RBP11.82□□□□□ -0.52
TRIM59-206ENST00000494486 CD93Q9NPY3 652 aa11.82□□□□□ -0.52
TRIM59-206ENST00000494486 SH3GLB2Q9NR46 395 aa11.82□□□□□ -0.52
TRIM59-206ENST00000494486 STARD13Q9Y3M8 1113 aa11.82□□□□□ -0.52
TRIM59-206ENST00000494486 H0Y8X5 98 aa11.81□□□□□ -0.52
TRIM59-206ENST00000494486 LAD1O00515 517 aa11.81□□□□□ -0.52
TRIM59-206ENST00000494486 ODC1P11926 461 aa11.81□□□□□ -0.52
TRIM59-206ENST00000494486 ITGB6P18564 788 aa11.81□□□□□ -0.52
TRIM59-206ENST00000494486 PAX3P23760 479 aa11.81□□□□□ -0.52
TRIM59-206ENST00000494486 OXTRP30559 389 aa11.81□□□□□ -0.52
TRIM59-206ENST00000494486 ATP2C1P98194 919 aaPredicted RBP11.81□□□□□ -0.52
TRIM59-206ENST00000494486 ZNF568Q3ZCX4 644 aa11.81□□□□□ -0.52
TRIM59-206ENST00000494486 KIAA1324Q6UXG2 1013 aaKnown RBP11.81□□□□□ -0.52
TRIM59-206ENST00000494486 CCDC81Q6ZN84 652 aa11.81□□□□□ -0.52
TRIM59-206ENST00000494486 FILIP1Q7Z7B0 1213 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms