RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 MED10Q9BTT4 135 aa24.04■■□□□ 1.44
SNIP1-203ENST00000493916 CLSTN2Q9H4D0 955 aa24.04■■□□□ 1.44
SNIP1-203ENST00000493916 KIF9Q9HAQ2 790 aa24.04■■□□□ 1.44
SNIP1-203ENST00000493916 HEBP1Q9NRV9 189 aa24.04■■□□□ 1.44
SNIP1-203ENST00000493916 COL4A3Q01955 1670 aa24.04■■□□□ 1.44
SNIP1-203ENST00000493916 TCF15Q12870 199 aa24.03■■□□□ 1.44
SNIP1-203ENST00000493916 ORC1Q13415 861 aa24.03■■□□□ 1.44
SNIP1-203ENST00000493916 CCDC40Q4G0X9 1142 aa24.03■■□□□ 1.44
SNIP1-203ENST00000493916 WDR44Q5JSH3 913 aa24.03■■□□□ 1.44
SNIP1-203ENST00000493916 TPRG1Q6ZUI0 275 aa24.03■■□□□ 1.44
SNIP1-203ENST00000493916 GPIHBP1Q8IV16 184 aa24.03■■□□□ 1.44
SNIP1-203ENST00000493916 CCDC105Q8IYK2 499 aa24.03■■□□□ 1.44
SNIP1-203ENST00000493916 BPIFB1Q8TDL5 484 aa24.03■■□□□ 1.44
SNIP1-203ENST00000493916 WHAMMQ8TF30 809 aa24.03■■□□□ 1.44
SNIP1-203ENST00000493916 FAM122AQ96E09 287 aa24.03■■□□□ 1.44
SNIP1-203ENST00000493916 TWNKQ96RR1 684 aa24.03■■□□□ 1.44
SNIP1-203ENST00000493916 NT5C1AQ9BXI3 368 aa24.03■■□□□ 1.44
SNIP1-203ENST00000493916 FOXQ1Q9C009 403 aa24.03■■□□□ 1.44
SNIP1-203ENST00000493916 SMG9Q9H0W8 520 aaKnown RBP24.03■■□□□ 1.44
SNIP1-203ENST00000493916 DMAP1Q9NPF5 467 aaPredicted RBP24.03■■□□□ 1.44
SNIP1-203ENST00000493916 KRT82Q9NSB4 513 aa24.03■■□□□ 1.44
SNIP1-203ENST00000493916 SIT1Q9Y3P8 196 aa24.03■■□□□ 1.44
SNIP1-203ENST00000493916 KIF26AQ9ULI4 1882 aaPredicted RBP24.02■■□□□ 1.44
SNIP1-203ENST00000493916 PMM2O15305 246 aa24.02■■□□□ 1.44
SNIP1-203ENST00000493916 GNA14O95837 355 aa24.02■■□□□ 1.44
SNIP1-203ENST00000493916 CCDC130P13994 396 aa24.02■■□□□ 1.44
SNIP1-203ENST00000493916 PFKLP17858 780 aa24.02■■□□□ 1.44
SNIP1-203ENST00000493916 CD58P19256 250 aa24.02■■□□□ 1.44
SNIP1-203ENST00000493916 PPP3CCP48454 512 aa24.02■■□□□ 1.44
SNIP1-203ENST00000493916 MLLT6P55198 1093 aaPredicted RBP24.02■■□□□ 1.44
SNIP1-203ENST00000493916 ARHGAP29Q52LW3 1261 aa24.02■■□□□ 1.44
SNIP1-203ENST00000493916 SLC2A14Q8TDB8 520 aa24.02■■□□□ 1.44
SNIP1-203ENST00000493916 USP13Q92995 863 aaPredicted RBP24.02■■□□□ 1.44
SNIP1-203ENST00000493916 OSBPL6Q9BZF3 934 aa24.02■■□□□ 1.44
SNIP1-203ENST00000493916 DNAI2Q9GZS0 605 aa24.02■■□□□ 1.44
SNIP1-203ENST00000493916 TDP1Q9NUW8 608 aa24.02■■□□□ 1.44
SNIP1-203ENST00000493916 TRAV19A0A0A6YYK7 116 aa24.01■■□□□ 1.43
SNIP1-203ENST00000493916 AP1G2O75843 785 aa24.01■■□□□ 1.43
SNIP1-203ENST00000493916 RTN3O95197 1032 aaPredicted RBP24.01■■□□□ 1.43
SNIP1-203ENST00000493916 GLULP15104 373 aa24.01■■□□□ 1.43
SNIP1-203ENST00000493916 FMO5P49326 533 aa24.01■■□□□ 1.43
SNIP1-203ENST00000493916 PDE6CP51160 858 aa24.01■■□□□ 1.43
SNIP1-203ENST00000493916 STX17P56962 302 aa24.01■■□□□ 1.43
SNIP1-203ENST00000493916 PLCB2Q00722 1185 aa24.01■■□□□ 1.43
SNIP1-203ENST00000493916 ZNF852Q6ZMS4 543 aa24.01■■□□□ 1.43
SNIP1-203ENST00000493916 NUP93Q8N1F7 819 aa24.01■■□□□ 1.43
SNIP1-203ENST00000493916 C12orf29Q8N999 325 aa24.01■■□□□ 1.43
SNIP1-203ENST00000493916 KCNK16Q96T55 309 aa24.01■■□□□ 1.43
SNIP1-203ENST00000493916 HNRNPABQ99729 332 aaKnown RBP24.01■■□□□ 1.43
SNIP1-203ENST00000493916 CSNK1G1Q9HCP0 422 aa24.01■■□□□ 1.43
SNIP1-203ENST00000493916 TRPC7Q9HCX4 862 aa24.01■■□□□ 1.43
SNIP1-203ENST00000493916 LTB4R2Q9NPC1 389 aa24.01■■□□□ 1.43
SNIP1-203ENST00000493916 FAM49BQ9NUQ9 324 aa24.01■■□□□ 1.43
SNIP1-203ENST00000493916 TRPM5Q9NZQ8 1165 aa24.01■■□□□ 1.43
SNIP1-203ENST00000493916 GCNT4Q9P109 453 aa24.01■■□□□ 1.43
SNIP1-203ENST00000493916 DLGAP2Q9P1A6 1054 aa24.01■■□□□ 1.43
SNIP1-203ENST00000493916 RWDD2AQ9UIY3 292 aa24.01■■□□□ 1.43
SNIP1-203ENST00000493916 CCL26Q9Y258 94 aa24.01■■□□□ 1.43
SNIP1-203ENST00000493916 TICRRQ7Z2Z1 1910 aa24■■□□□ 1.43
SNIP1-203ENST00000493916 SHISA7A6NL88 538 aa24■■□□□ 1.43
SNIP1-203ENST00000493916 TNFRSF10BO14763 440 aa24■■□□□ 1.43
SNIP1-203ENST00000493916 USP17L7P0C7H9 530 aa24■■□□□ 1.43
SNIP1-203ENST00000493916 MARSP56192 900 aaKnown RBP24■■□□□ 1.43
SNIP1-203ENST00000493916 NHLH1Q02575 133 aa24■■□□□ 1.43
SNIP1-203ENST00000493916 DTWD2Q8NBA8 298 aa24■■□□□ 1.43
SNIP1-203ENST00000493916 CSGALNACT1Q8TDX6 532 aa24■■□□□ 1.43
SNIP1-203ENST00000493916 OVCA2Q8WZ82 227 aa24■■□□□ 1.43
SNIP1-203ENST00000493916 MSANTD3Q96H12 275 aa24■■□□□ 1.43
SNIP1-203ENST00000493916 SMOQ99835 787 aa24■■□□□ 1.43
SNIP1-203ENST00000493916 IRF2BPLQ9H1B7 796 aa24■■□□□ 1.43
SNIP1-203ENST00000493916 CISHQ9NSE2 258 aa24■■□□□ 1.43
SNIP1-203ENST00000493916 LMBRD1Q9NUN5 540 aa24■■□□□ 1.43
SNIP1-203ENST00000493916 THG1LQ9NWX6 298 aaKnown RBP24■■□□□ 1.43
SNIP1-203ENST00000493916 PIAS3Q9Y6X2 628 aa24■■□□□ 1.43
SNIP1-203ENST00000493916 C2orf78A6NCI8 922 aa23.99■■□□□ 1.43
SNIP1-203ENST00000493916 ZNF840PA6NDX5 716 aa23.99■■□□□ 1.43
SNIP1-203ENST00000493916 MAN2B1O00754 1011 aa23.99■■□□□ 1.43
SNIP1-203ENST00000493916 FGFR1OPO95684 399 aaKnown RBP23.99■■□□□ 1.43
SNIP1-203ENST00000493916 TAF10Q12962 218 aa23.99■■□□□ 1.43
SNIP1-203ENST00000493916 TRIM59Q8IWR1 403 aa23.99■■□□□ 1.43
SNIP1-203ENST00000493916 MLKLQ8NB16 471 aa23.99■■□□□ 1.43
SNIP1-203ENST00000493916 ZMIZ2Q8NF64 920 aa23.99■■□□□ 1.43
SNIP1-203ENST00000493916 TATDN2Q93075 761 aa23.99■■□□□ 1.43
SNIP1-203ENST00000493916 IPO9Q96P70 1041 aaKnown RBP23.99■■□□□ 1.43
SNIP1-203ENST00000493916 GBP4Q96PP9 640 aa23.99■■□□□ 1.43
SNIP1-203ENST00000493916 SLITRK1Q96PX8 696 aa23.99■■□□□ 1.43
SNIP1-203ENST00000493916 SLC22A12Q96S37 553 aa23.99■■□□□ 1.43
SNIP1-203ENST00000493916 NELL2Q99435 816 aa23.99■■□□□ 1.43
SNIP1-203ENST00000493916 ARID3AQ99856 593 aa23.99■■□□□ 1.43
SNIP1-203ENST00000493916 COMMD8Q9NX08 183 aa23.99■■□□□ 1.43
SNIP1-203ENST00000493916 IL37Q9NZH6 218 aa23.99■■□□□ 1.43
SNIP1-203ENST00000493916 MRPS17Q9Y2R5 130 aaKnown RBP23.99■■□□□ 1.43
SNIP1-203ENST00000493916 P4HA2O15460 535 aa23.98■■□□□ 1.43
SNIP1-203ENST00000493916 CKMP06732 381 aa23.98■■□□□ 1.43
SNIP1-203ENST00000493916 DCNP07585 359 aaKnown RBP23.98■■□□□ 1.43
SNIP1-203ENST00000493916 FAM200BP0CF97 657 aa23.98■■□□□ 1.43
SNIP1-203ENST00000493916 YWHAQP27348 245 aa23.98■■□□□ 1.43
SNIP1-203ENST00000493916 SLC5A3P53794 718 aa23.98■■□□□ 1.43
SNIP1-203ENST00000493916 CUL2Q13617 745 aa23.98■■□□□ 1.43
SNIP1-203ENST00000493916 UBXN2BQ14CS0 331 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms