RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 IPPQ9Y573 584 aa11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 TLL2Q9Y6L7 1015 aa11.33□□□□□ -0.6
PHACTR4-204ENST00000493669 A8MXQ7 604 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 FAM155AB1AL88 458 aaPredicted RBP11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 CA12O43570 354 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 TCEA3O75764 348 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 TTC4O95801 387 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 PDGFRAP16234 1089 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 AKAP5P24588 427 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 RDXP35241 583 aaKnown RBP11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 TM4SF4P48230 202 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 RPL34P49207 117 aaKnown RBP11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 BCAT1P54687 386 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 IRX5P78411 483 aaPredicted RBP11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 MRPS6P82932 125 aaKnown RBP11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 ZNF200P98182 395 aaPredicted RBP11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 SLC6A3Q01959 620 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 BST2Q10589 180 aaKnown RBP11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 TRIP13Q15645 432 aaPredicted RBP11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 CCDC25Q86WR0 208 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 HACE1Q8IYU2 909 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 TOP6BLQ8N6T0 577 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 C12orf29Q8N999 325 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 KCTD6Q8NC69 237 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 TEKT4Q8WW24 435 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 RXFP2Q8WXD0 754 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 TBCBQ99426 244 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 APOL6Q9BWW8 343 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 SPC25Q9HBM1 224 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 BCCIPQ9P287 314 aaKnown RBP eCLIP11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 TRPV2Q9Y5S1 764 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 SCN10AQ9Y5Y9 1956 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 APOC4-APOC2K7ER74 178 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 RGS16O15492 202 aaPredicted RBP11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 APOC2P02655 101 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 ACADSBP45954 432 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 MAGOHP61326 146 aaKnown RBP11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 MORF4L2Q15014 288 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 TNFAIP8L3Q5GJ75 292 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 PCGF5Q86SE9 256 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 RPAINQ86UA6 219 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 FAM228AQ86W67 206 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 ANKRD52Q8NB46 1076 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 SMG8Q8ND04 991 aaKnown RBP11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 KBTBD7Q8WVZ9 684 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 TNIP3Q96KP6 325 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 SNX25Q9H3E2 840 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 CHST12Q9NRB3 414 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 GTF2IRD1Q9UHL9 959 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 SHOC2Q9UQ13 582 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 ZNF487B1APH4 448 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 SMAPO00193 183 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 RASGRF2O14827 1237 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 CST8O60676 142 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 CAND2O75155 1236 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 C6orf222P0C671 652 aaPredicted RBP11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 WARSP23381 471 aaKnown RBP11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 HPDP32754 393 aaPredicted RBP11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 LSP1P33241 339 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 CHKAP35790 457 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 TFDP2Q14188 446 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 PDK2Q15119 407 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 P3H1Q32P28 736 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 BOLA3Q53S33 107 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 FAM47CQ5HY64 1035 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 PMF1Q6P1K2 205 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 MAP7D3Q8IWC1 876 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 TRPV1Q8NER1 839 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 APPL2Q8NEU8 664 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 SERPINB12Q96P63 405 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 SLC38A7Q9NVC3 462 aa11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 TPX2Q9ULW0 747 aaKnown RBP11.32□□□□□ -0.6
PHACTR4-204ENST00000493669 TRIP12Q14669 1992 aaPredicted RBP11.31□□□□□ -0.6
PHACTR4-204ENST00000493669 PRPSAP2O60256 369 aa11.31□□□□□ -0.6
PHACTR4-204ENST00000493669 ABHD2P08910 425 aa11.31□□□□□ -0.6
PHACTR4-204ENST00000493669 ATP5DP30049 168 aa11.31□□□□□ -0.6
PHACTR4-204ENST00000493669 GNL1P36915 607 aaPredicted RBP11.31□□□□□ -0.6
PHACTR4-204ENST00000493669 ARSEP51690 589 aa11.31□□□□□ -0.6
PHACTR4-204ENST00000493669 SMTNL2Q2TAL5 461 aa11.31□□□□□ -0.6
PHACTR4-204ENST00000493669 TWF2Q6IBS0 349 aaKnown RBP11.31□□□□□ -0.6
PHACTR4-204ENST00000493669 ACTL9Q8TC94 416 aa11.31□□□□□ -0.6
PHACTR4-204ENST00000493669 ACSF2Q96CM8 615 aaPredicted RBP11.31□□□□□ -0.6
PHACTR4-204ENST00000493669 HSFY1Q96LI6 401 aa11.31□□□□□ -0.6
PHACTR4-204ENST00000493669 TTC25Q96NG3 672 aa11.31□□□□□ -0.6
PHACTR4-204ENST00000493669 FAM118BQ9BPY3 351 aa11.31□□□□□ -0.6
PHACTR4-204ENST00000493669 EPN3Q9H201 632 aa11.31□□□□□ -0.6
PHACTR4-204ENST00000493669 NME7Q9Y5B8 376 aa11.31□□□□□ -0.6
PHACTR4-204ENST00000493669 HUS1O60921 280 aa11.31□□□□□ -0.6
PHACTR4-204ENST00000493669 SDC4P31431 198 aa11.31□□□□□ -0.6
PHACTR4-204ENST00000493669 PTPN9P43378 593 aa11.31□□□□□ -0.6
PHACTR4-204ENST00000493669 VPS41P49754 854 aa11.31□□□□□ -0.6
PHACTR4-204ENST00000493669 PDE4CQ08493 712 aa11.31□□□□□ -0.6
PHACTR4-204ENST00000493669 GNASQ5JWF2 1037 aa11.31□□□□□ -0.6
PHACTR4-204ENST00000493669 CENPTQ96BT3 561 aa11.31□□□□□ -0.6
PHACTR4-204ENST00000493669 HHIPL1Q96JK4 782 aa11.31□□□□□ -0.6
PHACTR4-204ENST00000493669 FAM49BQ9NUQ9 324 aa11.31□□□□□ -0.6
PHACTR4-204ENST00000493669 ALDH1A1P00352 501 aa11.3□□□□□ -0.6
PHACTR4-204ENST00000493669 OTUD4Q01804 1114 aaKnown RBP11.3□□□□□ -0.6
PHACTR4-204ENST00000493669 PLCB3Q01970 1234 aa11.3□□□□□ -0.6
PHACTR4-204ENST00000493669 GUCY1A3Q02108 690 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms