RNA–Protein interactions for RNA: ENST00000493627.1

NFIA-213, Transcript of nuclear factor I A, humanhuman

TSL 1 (best)

Gene NFIA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-213ENST00000493627 TRIM66O15016 1216 aa9.73□□□□□ -0.85
NFIA-213ENST00000493627 CLIC2O15247 247 aa9.73□□□□□ -0.85
NFIA-213ENST00000493627 POLR2DO15514 142 aaKnown RBP9.73□□□□□ -0.85
NFIA-213ENST00000493627 TACC1O75410 805 aa9.73□□□□□ -0.85
NFIA-213ENST00000493627 RPP40O75818 363 aaKnown RBP9.73□□□□□ -0.85
NFIA-213ENST00000493627 PDGFRBP09619 1106 aa9.73□□□□□ -0.85
NFIA-213ENST00000493627 CASP1P29466 404 aa9.73□□□□□ -0.85
NFIA-213ENST00000493627 GALK1P51570 392 aa9.73□□□□□ -0.85
NFIA-213ENST00000493627 USP46P62068 366 aa9.73□□□□□ -0.85
NFIA-213ENST00000493627 SNRPFP62306 86 aaKnown RBP9.73□□□□□ -0.85
NFIA-213ENST00000493627 TNNC1P63316 161 aa9.73□□□□□ -0.85
NFIA-213ENST00000493627 BMT2Q1RMZ1 405 aa9.73□□□□□ -0.85
NFIA-213ENST00000493627 FOXD4L6Q3SYB3 417 aaPredicted RBP9.73□□□□□ -0.85
NFIA-213ENST00000493627 FBXO43Q4G163 708 aa9.73□□□□□ -0.85
NFIA-213ENST00000493627 MDH1BQ5I0G3 518 aa9.73□□□□□ -0.85
NFIA-213ENST00000493627 FOXD4L3Q6VB84 417 aaPredicted RBP9.73□□□□□ -0.85
NFIA-213ENST00000493627 XXYLT1Q8NBI6 393 aa9.73□□□□□ -0.85
NFIA-213ENST00000493627 RDH13Q8NBN7 331 aa9.73□□□□□ -0.85
NFIA-213ENST00000493627 GAB3Q8WWW8 586 aa9.73□□□□□ -0.85
NFIA-213ENST00000493627 CD101Q93033 1021 aa9.73□□□□□ -0.85
NFIA-213ENST00000493627 CEP295NLQ96MC4 621 aa9.73□□□□□ -0.85
NFIA-213ENST00000493627 HHIPQ96QV1 700 aa9.73□□□□□ -0.85
NFIA-213ENST00000493627 TTLL2Q9BWV7 592 aa9.73□□□□□ -0.85
NFIA-213ENST00000493627 GZF1Q9H116 711 aaPredicted RBP9.73□□□□□ -0.85
NFIA-213ENST00000493627 BLZF1Q9H2G9 400 aa9.73□□□□□ -0.85
NFIA-213ENST00000493627 SNX25Q9H3E2 840 aa9.73□□□□□ -0.85
NFIA-213ENST00000493627 FBRSL1Q9HCM7 1045 aaKnown RBP9.73□□□□□ -0.85
NFIA-213ENST00000493627 EHD2Q9NZN4 543 aa9.73□□□□□ -0.85
NFIA-213ENST00000493627 DENND4CQ5VZ89 1909 aa9.73□□□□□ -0.85
NFIA-213ENST00000493627 SPTBN2O15020 2390 aa9.72□□□□□ -0.85
NFIA-213ENST00000493627 F8VP50 259 aa9.72□□□□□ -0.85
NFIA-213ENST00000493627 SLC30A4O14863 429 aa9.72□□□□□ -0.85
NFIA-213ENST00000493627 FOXD2O60548 495 aaPredicted RBP9.72□□□□□ -0.85
NFIA-213ENST00000493627 AKAP3O75969 853 aa9.72□□□□□ -0.85
NFIA-213ENST00000493627 NFATC1O95644 943 aa9.72□□□□□ -0.85
NFIA-213ENST00000493627 STAU1O95793 577 aaKnown RBP9.72□□□□□ -0.85
NFIA-213ENST00000493627 CST3P01034 146 aaPredicted RBP9.72□□□□□ -0.85
NFIA-213ENST00000493627 CCDC192P0DO97 292 aa9.72□□□□□ -0.85
NFIA-213ENST00000493627 ZSCAN22P10073 491 aaPredicted RBP9.72□□□□□ -0.85
NFIA-213ENST00000493627 TCF3P15923 654 aa9.72□□□□□ -0.85
NFIA-213ENST00000493627 PFKLP17858 780 aa9.72□□□□□ -0.85
NFIA-213ENST00000493627 HDCP19113 662 aa9.72□□□□□ -0.85
NFIA-213ENST00000493627 GNL1P36915 607 aaPredicted RBP9.72□□□□□ -0.85
NFIA-213ENST00000493627 ME1P48163 572 aa9.72□□□□□ -0.85
NFIA-213ENST00000493627 PSEN1P49768 467 aa9.72□□□□□ -0.85
NFIA-213ENST00000493627 NOP14P78316 857 aaKnown RBP9.72□□□□□ -0.85
NFIA-213ENST00000493627 TRPC3Q13507 836 aa9.72□□□□□ -0.85
NFIA-213ENST00000493627 CUL4BQ13620 913 aa9.72□□□□□ -0.85
NFIA-213ENST00000493627 WDR72Q3MJ13 1102 aa9.72□□□□□ -0.85
NFIA-213ENST00000493627 KBTBD6Q86V97 674 aa9.72□□□□□ -0.85
NFIA-213ENST00000493627 C12orf56Q8IXR9 622 aa9.72□□□□□ -0.85
NFIA-213ENST00000493627 CAMKK1Q8N5S9 505 aa9.72□□□□□ -0.85
NFIA-213ENST00000493627 OR6B3Q8NGW1 331 aa9.72□□□□□ -0.85
NFIA-213ENST00000493627 RPLP0P6Q8NHW5 317 aa9.72□□□□□ -0.85
NFIA-213ENST00000493627 EZH1Q92800 747 aaPredicted RBP9.72□□□□□ -0.85
NFIA-213ENST00000493627 SNX21Q969T3 373 aa9.72□□□□□ -0.85
NFIA-213ENST00000493627 ACDQ96AP0 544 aa9.72□□□□□ -0.85
NFIA-213ENST00000493627 C8orf48Q96LL4 319 aa9.72□□□□□ -0.85
NFIA-213ENST00000493627 ZNF518BQ9C0D4 1074 aa9.72□□□□□ -0.85
NFIA-213ENST00000493627 ELOVL4Q9GZR5 314 aa9.72□□□□□ -0.85
NFIA-213ENST00000493627 DPEP3Q9H4B8 488 aa9.72□□□□□ -0.85
NFIA-213ENST00000493627 POLR3BQ9NW08 1133 aaPredicted RBP9.72□□□□□ -0.85
NFIA-213ENST00000493627 FAM13BQ9NYF5 915 aa9.72□□□□□ -0.85
NFIA-213ENST00000493627 TRPM5Q9NZQ8 1165 aa9.72□□□□□ -0.85
NFIA-213ENST00000493627 CGNQ9P2M7 1197 aaKnown RBP9.72□□□□□ -0.85
NFIA-213ENST00000493627 PVALEFA0A1B0GWK0 134 aa9.71□□□□□ -0.86
NFIA-213ENST00000493627 ZNF840PA6NDX5 716 aa9.71□□□□□ -0.86
NFIA-213ENST00000493627 LEFTY2O00292 366 aa9.71□□□□□ -0.86
NFIA-213ENST00000493627 AXIN1O15169 862 aa9.71□□□□□ -0.86
NFIA-213ENST00000493627 EXOC3O60645 756 aa9.71□□□□□ -0.86
NFIA-213ENST00000493627 CLSTN1O94985 981 aa9.71□□□□□ -0.86
NFIA-213ENST00000493627 EPN2O95208 641 aa9.71□□□□□ -0.86
NFIA-213ENST00000493627 APBB3O95704 486 aa9.71□□□□□ -0.86
NFIA-213ENST00000493627 OLFM2O95897 454 aa9.71□□□□□ -0.86
NFIA-213ENST00000493627 F13A1P00488 732 aa9.71□□□□□ -0.86
NFIA-213ENST00000493627 HSP90AA1P07900 732 aaKnown RBP9.71□□□□□ -0.86
NFIA-213ENST00000493627 AFMP43652 599 aa9.71□□□□□ -0.86
NFIA-213ENST00000493627 CASP4P49662 377 aa9.71□□□□□ -0.86
NFIA-213ENST00000493627 CACNA2D1P54289 1103 aa9.71□□□□□ -0.86
NFIA-213ENST00000493627 MYL6P60660 151 aa9.71□□□□□ -0.86
NFIA-213ENST00000493627 SLC7A9P82251 487 aa9.71□□□□□ -0.86
NFIA-213ENST00000493627 ZXDBP98169 803 aa9.71□□□□□ -0.86
NFIA-213ENST00000493627 TAF10Q12962 218 aa9.71□□□□□ -0.86
NFIA-213ENST00000493627 NR1H3Q13133 447 aa9.71□□□□□ -0.86
NFIA-213ENST00000493627 PSMD2Q13200 908 aa9.71□□□□□ -0.86
NFIA-213ENST00000493627 BIRC3Q13489 604 aa9.71□□□□□ -0.86
NFIA-213ENST00000493627 KNOP1Q1ED39 458 aaKnown RBP9.71□□□□□ -0.86
NFIA-213ENST00000493627 RESP18Q5W5W9 173 aa9.71□□□□□ -0.86
NFIA-213ENST00000493627 SYT13Q7L8C5 426 aa9.71□□□□□ -0.86
NFIA-213ENST00000493627 CACNA2D4Q7Z3S7 1137 aa9.71□□□□□ -0.86
NFIA-213ENST00000493627 HSCBQ8IWL3 235 aa9.71□□□□□ -0.86
NFIA-213ENST00000493627 B3GALNT2Q8NCR0 500 aa9.71□□□□□ -0.86
NFIA-213ENST00000493627 GOLGA5Q8TBA6 731 aa9.71□□□□□ -0.86
NFIA-213ENST00000493627 SYAP1Q96A49 352 aaPredicted RBP9.71□□□□□ -0.86
NFIA-213ENST00000493627 LOXL4Q96JB6 756 aa9.71□□□□□ -0.86
NFIA-213ENST00000493627 SLITRK1Q96PX8 696 aa9.71□□□□□ -0.86
NFIA-213ENST00000493627 XYLT2Q9H1B5 865 aa9.71□□□□□ -0.86
NFIA-213ENST00000493627 ARRDC1-AS1Q9H2J1 176 aa9.71□□□□□ -0.86
NFIA-213ENST00000493627 SLC39A2Q9NP94 309 aa9.71□□□□□ -0.86
NFIA-213ENST00000493627 TMEM30AQ9NV96 361 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms