RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 RTKNQ9BST9 563 aa17.74■□□□□ 0.43
PTPRU-208ENST00000493601 BLZF1Q9H2G9 400 aa17.74■□□□□ 0.43
PTPRU-208ENST00000493601 TRPM5Q9NZQ8 1165 aa17.74■□□□□ 0.43
PTPRU-208ENST00000493601 ARHGAP26Q9UNA1 814 aa17.74■□□□□ 0.43
PTPRU-208ENST00000493601 WNT6Q9Y6F9 365 aa17.74■□□□□ 0.43
PTPRU-208ENST00000493601 FOXD2O60548 495 aaPredicted RBP17.73■□□□□ 0.43
PTPRU-208ENST00000493601 RNF40O75150 1001 aa17.73■□□□□ 0.43
PTPRU-208ENST00000493601 STAU1O95793 577 aaKnown RBP17.73■□□□□ 0.43
PTPRU-208ENST00000493601 HDCP19113 662 aa17.73■□□□□ 0.43
PTPRU-208ENST00000493601 CASP1P29466 404 aa17.73■□□□□ 0.43
PTPRU-208ENST00000493601 PPP3CCP48454 512 aa17.73■□□□□ 0.43
PTPRU-208ENST00000493601 ATXN1P54253 815 aaKnown RBP17.73■□□□□ 0.43
PTPRU-208ENST00000493601 NOP14P78316 857 aaKnown RBP17.73■□□□□ 0.43
PTPRU-208ENST00000493601 NR1H3Q13133 447 aa17.73■□□□□ 0.43
PTPRU-208ENST00000493601 TRPC3Q13507 836 aa17.73■□□□□ 0.43
PTPRU-208ENST00000493601 CSRP2Q16527 193 aa17.73■□□□□ 0.43
PTPRU-208ENST00000493601 KNOP1Q1ED39 458 aaKnown RBP17.73■□□□□ 0.43
PTPRU-208ENST00000493601 EML3Q32P44 896 aa17.73■□□□□ 0.43
PTPRU-208ENST00000493601 WDR72Q3MJ13 1102 aa17.73■□□□□ 0.43
PTPRU-208ENST00000493601 CEP57L1Q8IYX8 460 aa17.73■□□□□ 0.43
PTPRU-208ENST00000493601 FAM160A2Q8N612 972 aaPredicted RBP17.73■□□□□ 0.43
PTPRU-208ENST00000493601 OR6B3Q8NGW1 331 aa17.73■□□□□ 0.43
PTPRU-208ENST00000493601 GOLGA5Q8TBA6 731 aa17.73■□□□□ 0.43
PTPRU-208ENST00000493601 NETO1Q8TDF5 533 aa17.73■□□□□ 0.43
PTPRU-208ENST00000493601 GAB3Q8WWW8 586 aa17.73■□□□□ 0.43
PTPRU-208ENST00000493601 SYAP1Q96A49 352 aaPredicted RBP17.73■□□□□ 0.43
PTPRU-208ENST00000493601 TTLL2Q9BWV7 592 aa17.73■□□□□ 0.43
PTPRU-208ENST00000493601 ELOVL4Q9GZR5 314 aa17.73■□□□□ 0.43
PTPRU-208ENST00000493601 SLC39A2Q9NP94 309 aa17.73■□□□□ 0.43
PTPRU-208ENST00000493601 SEMA4GQ9NTN9 838 aa17.73■□□□□ 0.43
PTPRU-208ENST00000493601 PCDHA7Q9UN72 937 aa17.73■□□□□ 0.43
PTPRU-208ENST00000493601 SPAG17Q6Q759 2223 aa17.73■□□□□ 0.43
PTPRU-208ENST00000493601 NCOR2Q9Y618 2525 aa17.73■□□□□ 0.43
PTPRU-208ENST00000493601 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.72■□□□□ 0.43
PTPRU-208ENST00000493601 EXOC3O60645 756 aa17.72■□□□□ 0.43
PTPRU-208ENST00000493601 RPP40O75818 363 aaKnown RBP17.72■□□□□ 0.43
PTPRU-208ENST00000493601 CST3P01034 146 aaPredicted RBP17.72■□□□□ 0.43
PTPRU-208ENST00000493601 ATICP31939 592 aa17.72■□□□□ 0.43
PTPRU-208ENST00000493601 AFMP43652 599 aa17.72■□□□□ 0.43
PTPRU-208ENST00000493601 GALK1P51570 392 aa17.72■□□□□ 0.43
PTPRU-208ENST00000493601 USP46P62068 366 aa17.72■□□□□ 0.43
PTPRU-208ENST00000493601 CUL4BQ13620 913 aa17.72■□□□□ 0.43
PTPRU-208ENST00000493601 PRR23CQ6ZRP0 262 aa17.72■□□□□ 0.43
PTPRU-208ENST00000493601 CAMKK1Q8N5S9 505 aa17.72■□□□□ 0.43
PTPRU-208ENST00000493601 CD101Q93033 1021 aa17.72■□□□□ 0.43
PTPRU-208ENST00000493601 C8orf48Q96LL4 319 aa17.72■□□□□ 0.43
PTPRU-208ENST00000493601 CFAP45Q9UL16 551 aa17.72■□□□□ 0.43
PTPRU-208ENST00000493601 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.72■□□□□ 0.43
PTPRU-208ENST00000493601 ATG2BQ96BY7 2078 aa17.71■□□□□ 0.43
PTPRU-208ENST00000493601 EML5Q05BV3 1969 aa17.71■□□□□ 0.43
PTPRU-208ENST00000493601 F8VP50 259 aa17.71■□□□□ 0.43
PTPRU-208ENST00000493601 PHACTR2O75167 634 aa17.71■□□□□ 0.43
PTPRU-208ENST00000493601 NFATC1O95644 943 aa17.71■□□□□ 0.43
PTPRU-208ENST00000493601 PTPN1P18031 435 aaKnown RBP17.71■□□□□ 0.43
PTPRU-208ENST00000493601 B3GALNT2Q8NCR0 500 aa17.71■□□□□ 0.43
PTPRU-208ENST00000493601 CCDC26Q8TAB7 109 aa17.71■□□□□ 0.43
PTPRU-208ENST00000493601 ACDQ96AP0 544 aa17.71■□□□□ 0.43
PTPRU-208ENST00000493601 XYLT2Q9H1B5 865 aa17.71■□□□□ 0.43
PTPRU-208ENST00000493601 FBRSL1Q9HCM7 1045 aaKnown RBP17.71■□□□□ 0.43
PTPRU-208ENST00000493601 NXF1Q9UBU9 619 aaKnown RBP17.71■□□□□ 0.43
PTPRU-208ENST00000493601 ATP8B3O60423 1300 aa17.71■□□□□ 0.42
PTPRU-208ENST00000493601 ZNF840PA6NDX5 716 aa17.7■□□□□ 0.42
PTPRU-208ENST00000493601 A8MXQ7 604 aa17.7■□□□□ 0.42
PTPRU-208ENST00000493601 AKAP3O75969 853 aa17.7■□□□□ 0.42
PTPRU-208ENST00000493601 CLSTN1O94985 981 aa17.7■□□□□ 0.42
PTPRU-208ENST00000493601 SLFN14P0C7P3 912 aa17.7■□□□□ 0.42
PTPRU-208ENST00000493601 CCDC192P0DO97 292 aa17.7■□□□□ 0.42
PTPRU-208ENST00000493601 HOXC13P31276 330 aa17.7■□□□□ 0.42
PTPRU-208ENST00000493601 PXNP49023 591 aaPredicted RBP17.7■□□□□ 0.42
PTPRU-208ENST00000493601 AP3M2P53677 418 aa17.7■□□□□ 0.42
PTPRU-208ENST00000493601 MYL6P60660 151 aa17.7■□□□□ 0.42
PTPRU-208ENST00000493601 BIRC3Q13489 604 aa17.7■□□□□ 0.42
PTPRU-208ENST00000493601 TDRD10Q5VZ19 366 aaKnown RBP17.7■□□□□ 0.42
PTPRU-208ENST00000493601 NAIF1Q69YI7 327 aaPredicted RBP17.7■□□□□ 0.42
PTPRU-208ENST00000493601 CACNA2D4Q7Z3S7 1137 aa17.7■□□□□ 0.42
PTPRU-208ENST00000493601 KIAA1958Q8N8K9 716 aa17.7■□□□□ 0.42
PTPRU-208ENST00000493601 RPLP0P6Q8NHW5 317 aa17.7■□□□□ 0.42
PTPRU-208ENST00000493601 ZNF516Q92618 1163 aa17.7■□□□□ 0.42
PTPRU-208ENST00000493601 LOXL4Q96JB6 756 aa17.7■□□□□ 0.42
PTPRU-208ENST00000493601 SLITRK1Q96PX8 696 aa17.7■□□□□ 0.42
PTPRU-208ENST00000493601 GZF1Q9H116 711 aaPredicted RBP17.7■□□□□ 0.42
PTPRU-208ENST00000493601 DPEP3Q9H4B8 488 aa17.7■□□□□ 0.42
PTPRU-208ENST00000493601 EXOC1Q9NV70 894 aa17.7■□□□□ 0.42
PTPRU-208ENST00000493601 NME7Q9Y5B8 376 aa17.7■□□□□ 0.42
PTPRU-208ENST00000493601 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.69■□□□□ 0.42
PTPRU-208ENST00000493601 LEFTY2O00292 366 aa17.69■□□□□ 0.42
PTPRU-208ENST00000493601 SLC7A9P82251 487 aa17.69■□□□□ 0.42
PTPRU-208ENST00000493601 ZNF699Q32M78 642 aa17.69■□□□□ 0.42
PTPRU-208ENST00000493601 SYT13Q7L8C5 426 aa17.69■□□□□ 0.42
PTPRU-208ENST00000493601 GRAMD1CQ8IYS0 662 aa17.69■□□□□ 0.42
PTPRU-208ENST00000493601 HHIPQ96QV1 700 aa17.69■□□□□ 0.42
PTPRU-208ENST00000493601 ZNF518BQ9C0D4 1074 aa17.69■□□□□ 0.42
PTPRU-208ENST00000493601 VRTNQ9H8Y1 702 aa17.69■□□□□ 0.42
PTPRU-208ENST00000493601 SLC30A4O14863 429 aa17.68■□□□□ 0.42
PTPRU-208ENST00000493601 APBB3O95704 486 aa17.68■□□□□ 0.42
PTPRU-208ENST00000493601 OLFM2O95897 454 aa17.68■□□□□ 0.42
PTPRU-208ENST00000493601 ABL1P00519 1130 aa17.68■□□□□ 0.42
PTPRU-208ENST00000493601 RAP1GAPP47736 663 aa17.68■□□□□ 0.42
PTPRU-208ENST00000493601 CASP4P49662 377 aa17.68■□□□□ 0.42
PTPRU-208ENST00000493601 CACNA2D1P54289 1103 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms