RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 PACSIN2Q9UNF0 486 aaPredicted RBP8.48□□□□□ -1.05
FDPS-218ENST00000492887 HYOU1Q9Y4L1 999 aa8.48□□□□□ -1.05
FDPS-218ENST00000492887 NR2E3Q9Y5X4 410 aa8.48□□□□□ -1.05
FDPS-218ENST00000492887 COL4A4P53420 1690 aaPredicted RBP8.48□□□□□ -1.05
FDPS-218ENST00000492887 HELZP42694 1942 aaKnown RBP8.48□□□□□ -1.05
FDPS-218ENST00000492887 MYO9BQ13459 2157 aa8.48□□□□□ -1.05
FDPS-218ENST00000492887 OR6C75A6NL08 312 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 TULP2O00295 520 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 BUB1BO60566 1050 aaPredicted RBP8.47□□□□□ -1.05
FDPS-218ENST00000492887 GRAP2O75791 330 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 GJB5O95377 273 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 CYP1A2P05177 515 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 KRT3P12035 628 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 ATP2A2P16615 1042 aaKnown RBP8.47□□□□□ -1.05
FDPS-218ENST00000492887 MMP8P22894 467 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 BDNFP23560 247 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 PSMA2P25787 234 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 GPD2P43304 727 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 GLUD2P49448 558 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 RABGGTBP53611 331 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 TAP1Q03518 808 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 KRT17Q04695 432 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 ADIGQ0VDE8 80 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 SMC1AQ14683 1233 aaKnown RBP8.47□□□□□ -1.05
FDPS-218ENST00000492887 RPS6KA1Q15418 735 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 SEL1L2Q5TEA6 688 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 KIAA0319Q5VV43 1072 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 PRSS55Q6UWB4 352 aaPredicted RBP8.47□□□□□ -1.05
FDPS-218ENST00000492887 ANKS3Q6ZW76 656 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 LIMS2Q7Z4I7 341 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 TMEM173Q86WV6 379 aaPredicted RBP8.47□□□□□ -1.05
FDPS-218ENST00000492887 TNS4Q8IZW8 715 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 FUKQ8N0W3 1084 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 UBL4BQ8N7F7 174 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 C3orf20Q8ND61 904 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.47□□□□□ -1.05
FDPS-218ENST00000492887 FEZF2Q8TBJ5 459 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 HERVK_113Q902F9 699 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 GOLGA1Q92805 767 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 FAM149B1Q96BN6 582 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 ZNF689Q96CS4 500 aaPredicted RBP8.47□□□□□ -1.05
FDPS-218ENST00000492887 IGSF21Q96ID5 467 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 DMAP1Q9NPF5 467 aaPredicted RBP8.47□□□□□ -1.05
FDPS-218ENST00000492887 SPG21Q9NZD8 308 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 IP6K2Q9UHH9 426 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 CYTH4Q9UIA0 394 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 JRKLQ9Y4A0 524 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 INSL6Q9Y581 213 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 PCDHB5Q9Y5E4 795 aa8.47□□□□□ -1.05
FDPS-218ENST00000492887 TRIM66O15016 1216 aa8.46□□□□□ -1.06
FDPS-218ENST00000492887 LPXNO60711 386 aa8.46□□□□□ -1.06
FDPS-218ENST00000492887 SOD2P04179 222 aa8.46□□□□□ -1.06
FDPS-218ENST00000492887 GPD1P21695 349 aa8.46□□□□□ -1.06
FDPS-218ENST00000492887 COMTP21964 271 aa8.46□□□□□ -1.06
FDPS-218ENST00000492887 FGFR3P22607 806 aa8.46□□□□□ -1.06
FDPS-218ENST00000492887 PLA2G4AP47712 749 aa8.46□□□□□ -1.06
FDPS-218ENST00000492887 EPHB4P54760 987 aa8.46□□□□□ -1.06
FDPS-218ENST00000492887 PLCB3Q01970 1234 aa8.46□□□□□ -1.06
FDPS-218ENST00000492887 CKAP4Q07065 602 aaKnown RBP8.46□□□□□ -1.06
FDPS-218ENST00000492887 ZNF268Q14587 947 aaPredicted RBP8.46□□□□□ -1.06
FDPS-218ENST00000492887 NFE2Q16621 373 aaPredicted RBP8.46□□□□□ -1.06
FDPS-218ENST00000492887 CDO1Q16878 200 aa8.46□□□□□ -1.06
FDPS-218ENST00000492887 MGAT5BQ3V5L5 792 aa8.46□□□□□ -1.06
FDPS-218ENST00000492887 RTP2Q5QGT7 225 aa8.46□□□□□ -1.06
FDPS-218ENST00000492887 COL13A1Q5TAT6 717 aaPredicted RBP8.46□□□□□ -1.06
FDPS-218ENST00000492887 C11orf63Q6NUN7 778 aa8.46□□□□□ -1.06
FDPS-218ENST00000492887 PMF1Q6P1K2 205 aa8.46□□□□□ -1.06
FDPS-218ENST00000492887 CLEC20AQ6ZU45 233 aa8.46□□□□□ -1.06
FDPS-218ENST00000492887 PIGZQ86VD9 579 aa8.46□□□□□ -1.06
FDPS-218ENST00000492887 XYLT1Q86Y38 959 aa8.46□□□□□ -1.06
FDPS-218ENST00000492887 HERC6Q8IVU3 1022 aa8.46□□□□□ -1.06
FDPS-218ENST00000492887 SLC39A11Q8N1S5 342 aa8.46□□□□□ -1.06
FDPS-218ENST00000492887 WDTC1Q8N5D0 677 aa8.46□□□□□ -1.06
FDPS-218ENST00000492887 BCL7CQ8WUZ0 217 aaPredicted RBP8.46□□□□□ -1.06
FDPS-218ENST00000492887 VWCEQ96DN2 955 aa8.46□□□□□ -1.06
FDPS-218ENST00000492887 SEPT5Q99719 369 aaPredicted RBP8.46□□□□□ -1.06
FDPS-218ENST00000492887 RTP3Q9BQQ7 232 aa8.46□□□□□ -1.06
FDPS-218ENST00000492887 RHOBTB2Q9BYZ6 727 aa8.46□□□□□ -1.06
FDPS-218ENST00000492887 ZCWPW1Q9H0M4 648 aa8.46□□□□□ -1.06
FDPS-218ENST00000492887 TMLHEQ9NVH6 421 aa8.46□□□□□ -1.06
FDPS-218ENST00000492887 CXXC1Q9P0U4 656 aaPredicted RBP8.46□□□□□ -1.06
FDPS-218ENST00000492887 COG5Q9UP83 839 aa8.46□□□□□ -1.06
FDPS-218ENST00000492887 PCDHGC5Q9Y5F6 944 aa8.46□□□□□ -1.06
FDPS-218ENST00000492887 SAR1BQ9Y6B6 198 aa8.46□□□□□ -1.06
FDPS-218ENST00000492887 CDY1Q9Y6F8 540 aa8.46□□□□□ -1.06
FDPS-218ENST00000492887 F8VP50 259 aa8.45□□□□□ -1.06
FDPS-218ENST00000492887 KCNK3O14649 394 aa8.45□□□□□ -1.06
FDPS-218ENST00000492887 CAPN9O14815 690 aa8.45□□□□□ -1.06
FDPS-218ENST00000492887 RNF8O76064 485 aa8.45□□□□□ -1.06
FDPS-218ENST00000492887 MTA2O94776 668 aa8.45□□□□□ -1.06
FDPS-218ENST00000492887 OAZ2O95190 189 aa8.45□□□□□ -1.06
FDPS-218ENST00000492887 TCP1P17987 556 aaKnown RBP8.45□□□□□ -1.06
FDPS-218ENST00000492887 RPL17P18621 184 aaKnown RBP8.45□□□□□ -1.06
FDPS-218ENST00000492887 SDC4P31431 198 aa8.45□□□□□ -1.06
FDPS-218ENST00000492887 PAFAH1B1P43034 410 aa8.45□□□□□ -1.06
FDPS-218ENST00000492887 TKTL1P51854 596 aa8.45□□□□□ -1.06
FDPS-218ENST00000492887 HADHBP55084 474 aaKnown RBP8.45□□□□□ -1.06
FDPS-218ENST00000492887 SLC6A3Q01959 620 aa8.45□□□□□ -1.06
FDPS-218ENST00000492887 PTP4A2Q12974 167 aa8.45□□□□□ -1.06
FDPS-218ENST00000492887 MAMLD1Q13495 774 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms