RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 AVPR1AP37288 418 aa11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 PDE6CP51160 858 aa11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 CACNA2D1P54289 1103 aa11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 GPC5P78333 572 aa11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 GCNT1Q02742 428 aa11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 FCHO2Q0JRZ9 810 aa11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 VITQ6UXI7 678 aa11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 MON1AQ86VX9 555 aa11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 ARID3BQ8IVW6 561 aaPredicted RBP11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 CMTM8Q8IZV2 173 aa11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 SIX5Q8N196 739 aa11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 NUP93Q8N1F7 819 aa11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 C12orf29Q8N999 325 aa11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 PDZD8Q8NEN9 1154 aa11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 ST13P5Q8NFI4 369 aaPredicted RBP11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 LMO3Q8TAP4 145 aa11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 OVCA2Q8WZ82 227 aa11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 TATDN2Q93075 761 aa11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 CYFIP2Q96F07 1278 aa11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 TMEM176AQ96HP8 235 aa11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 SLITRK1Q96PX8 696 aa11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 ARID3AQ99856 593 aa11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 TRMT61BQ9BVS5 477 aaKnown RBP11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 SLC46A2Q9BY10 475 aa11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 PLA2G2FQ9BZM2 168 aa11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 MFSD1Q9H3U5 465 aa11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 PNPLA8Q9NP80 782 aa11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 ARHGEF3Q9NR81 526 aa11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 HELZP42694 1942 aaKnown RBP11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 ANAPC1Q9H1A4 1944 aa11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 MYO16Q9Y6X6 1858 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 MYH10P35580 1976 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 YWHAQP27348 245 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 ADORA2BP29275 332 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 VIPR2P41587 438 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 MTIF2P46199 727 aaKnown RBP11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 SLC5A3P53794 718 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 RAD23BP54727 409 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 USP46P62068 366 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 PRKCQQ04759 706 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 LRMPQ12912 555 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 ZNF268Q14587 947 aaPredicted RBP11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 ZNF394Q53GI3 561 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 ARHGAP17Q68EM7 881 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 TXNDC8Q6A555 127 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 SASS6Q6UVJ0 657 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 CLEC20AQ6ZU45 233 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 IRF2BP1Q8IU81 584 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 PPM1KQ8N3J5 372 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 CELF5Q8N6W0 485 aaKnown RBP11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 UBR7Q8N806 425 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 MAB21L3Q8N8X9 362 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 SLC4A11Q8NBS3 891 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 EHBP1Q8NDI1 1231 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 IRF7Q92985 503 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 SHDQ96IW2 340 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 FAM81BQ96LP2 452 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 KCNK16Q96T55 309 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 SMOQ99835 787 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 BRD9Q9H8M2 597 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 TRPV5Q9NQA5 729 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 ANO10Q9NW15 660 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 IL37Q9NZH6 218 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 TRPM5Q9NZQ8 1165 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 GCNT4Q9P109 453 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 CA14Q9ULX7 337 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 HCN4Q9Y3Q4 1203 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 NCANO14594 1321 aa11.29□□□□□ -0.6
CDC42SE1-206ENST00000492796 TRAV19A0A0A6YYK7 116 aa11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 FAM92AA1XBS5 289 aa11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 GTPBP10A4D1E9 387 aaKnown RBP11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 KRBA1A5PL33 1030 aa11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 TNFRSF10BO14763 440 aa11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 ZNF263O14978 683 aa11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 CHADO15335 359 aa11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 PRAMEF12O95522 483 aa11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 PDGFBP01127 241 aaPredicted RBP11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 USP17L7P0C7H9 530 aa11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 NPR3P17342 541 aa11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 EEF1GP26641 437 aaKnown RBP11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 GDI1P31150 447 aa11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 MAP3K7CLP57077 242 aa11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 PLCB2Q00722 1185 aa11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 GRM2Q14416 872 aa11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 MLF2Q15773 248 aaPredicted RBP11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 STX1AQ16623 288 aa11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 MAN2A1Q16706 1144 aa11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 ARHGAP29Q52LW3 1261 aa11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 PPP1R26Q5T8A7 1209 aaPredicted RBP11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 CWF19L1Q69YN2 538 aaKnown RBP11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 SMYD5Q6GMV2 418 aa11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 PHLDB3Q6NSJ2 640 aa11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 CREBRFQ8IUR6 639 aa11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 YAF2Q8IY57 180 aa11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 ZMIZ2Q8NF64 920 aa11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 ENOX1Q8TC92 643 aaKnown RBP11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 BPIFB1Q8TDL5 484 aa11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 JAKMIP2Q96AA8 810 aa11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 HEXIM2Q96MH2 286 aaKnown RBP11.28□□□□□ -0.6
CDC42SE1-206ENST00000492796 DUSP16Q9BY84 665 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms