RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 EPB41P11171 864 aaKnown RBP28.83■■■□□ 2.21
SH3GL3-204ENST00000492099 PFKLP17858 780 aa28.83■■■□□ 2.21
SH3GL3-204ENST00000492099 ITPRIPL2Q3MIP1 535 aa28.83■■■□□ 2.21
SH3GL3-204ENST00000492099 CC2D1AQ6P1N0 951 aaPredicted RBP28.83■■■□□ 2.21
SH3GL3-204ENST00000492099 MAML2Q8IZL2 1156 aaPredicted RBP28.83■■■□□ 2.21
SH3GL3-204ENST00000492099 FAM83CQ9BQN1 747 aa28.83■■■□□ 2.21
SH3GL3-204ENST00000492099 SEMA4AQ9H3S1 761 aa28.83■■■□□ 2.21
SH3GL3-204ENST00000492099 LMAN1LQ9HAT1 526 aa28.83■■■□□ 2.21
SH3GL3-204ENST00000492099 CKMP06732 381 aa28.82■■■□□ 2.2
SH3GL3-204ENST00000492099 TRIM21P19474 475 aaKnown RBP28.82■■■□□ 2.2
SH3GL3-204ENST00000492099 CTHP32929 405 aa28.82■■■□□ 2.2
SH3GL3-204ENST00000492099 ASPAP45381 313 aa28.82■■■□□ 2.2
SH3GL3-204ENST00000492099 SOX9P48436 509 aa28.82■■■□□ 2.2
SH3GL3-204ENST00000492099 CACNA2D1P54289 1103 aa28.82■■■□□ 2.2
SH3GL3-204ENST00000492099 USP46P62068 366 aa28.82■■■□□ 2.2
SH3GL3-204ENST00000492099 TNK2Q07912 1038 aa28.82■■■□□ 2.2
SH3GL3-204ENST00000492099 ZNF528Q3MIS6 628 aa28.82■■■□□ 2.2
SH3GL3-204ENST00000492099 SPOPLQ6IQ16 392 aa28.82■■■□□ 2.2
SH3GL3-204ENST00000492099 ZC3H14Q6PJT7 736 aaKnown RBP28.82■■■□□ 2.2
SH3GL3-204ENST00000492099 CRYBG2Q8N1P7 616 aa28.82■■■□□ 2.2
SH3GL3-204ENST00000492099 CCDC150Q8NCX0 1101 aa28.82■■■□□ 2.2
SH3GL3-204ENST00000492099 TAS1R2Q8TE23 839 aa28.82■■■□□ 2.2
SH3GL3-204ENST00000492099 ERCC4Q92889 916 aaPredicted RBP28.82■■■□□ 2.2
SH3GL3-204ENST00000492099 CYP2S1Q96SQ9 504 aa28.82■■■□□ 2.2
SH3GL3-204ENST00000492099 MED10Q9BTT4 135 aa28.82■■■□□ 2.2
SH3GL3-204ENST00000492099 CHRDQ9H2X0 955 aa28.82■■■□□ 2.2
SH3GL3-204ENST00000492099 GCNT4Q9P109 453 aa28.82■■■□□ 2.2
SH3GL3-204ENST00000492099 PTPRDP23468 1912 aa28.82■■■□□ 2.2
SH3GL3-204ENST00000492099 OBSL1O75147 1896 aa28.81■■■□□ 2.2
SH3GL3-204ENST00000492099 STX10O60499 249 aa28.81■■■□□ 2.2
SH3GL3-204ENST00000492099 KINO60870 393 aaKnown RBP28.81■■■□□ 2.2
SH3GL3-204ENST00000492099 HDCP19113 662 aa28.81■■■□□ 2.2
SH3GL3-204ENST00000492099 NDST1P52848 882 aa28.81■■■□□ 2.2
SH3GL3-204ENST00000492099 FKBP3Q00688 224 aaKnown RBP28.81■■■□□ 2.2
SH3GL3-204ENST00000492099 KRT39Q6A163 491 aa28.81■■■□□ 2.2
SH3GL3-204ENST00000492099 ACOT1Q86TX2 421 aa28.81■■■□□ 2.2
SH3GL3-204ENST00000492099 FAM35AQ86V20 835 aa28.81■■■□□ 2.2
SH3GL3-204ENST00000492099 ARL14EPQ8N8R7 260 aaPredicted RBP28.81■■■□□ 2.2
SH3GL3-204ENST00000492099 TTC8Q8TAM2 541 aa28.81■■■□□ 2.2
SH3GL3-204ENST00000492099 EEF2KMTQ96G04 330 aa28.81■■■□□ 2.2
SH3GL3-204ENST00000492099 MMRN2Q9H8L6 949 aa28.81■■■□□ 2.2
SH3GL3-204ENST00000492099 CYP3A43Q9HB55 503 aa28.81■■■□□ 2.2
SH3GL3-204ENST00000492099 TMEM30AQ9NV96 361 aa28.81■■■□□ 2.2
SH3GL3-204ENST00000492099 ZFHX2Q9C0A1 2572 aaPredicted RBP28.81■■■□□ 2.2
SH3GL3-204ENST00000492099 CACNA1IQ9P0X4 2223 aa28.81■■■□□ 2.2
SH3GL3-204ENST00000492099 C2orf78A6NCI8 922 aa28.8■■■□□ 2.2
SH3GL3-204ENST00000492099 CHRNB1P11230 501 aa28.8■■■□□ 2.2
SH3GL3-204ENST00000492099 RUNX3Q13761 415 aa28.8■■■□□ 2.2
SH3GL3-204ENST00000492099 MAMSTRQ6ZN01 415 aa28.8■■■□□ 2.2
SH3GL3-204ENST00000492099 ADSSL1Q8N142 457 aa28.8■■■□□ 2.2
SH3GL3-204ENST00000492099 NUP93Q8N1F7 819 aa28.8■■■□□ 2.2
SH3GL3-204ENST00000492099 SMARCD1Q96GM5 515 aa28.8■■■□□ 2.2
SH3GL3-204ENST00000492099 SLITRK1Q96PX8 696 aa28.8■■■□□ 2.2
SH3GL3-204ENST00000492099 SLC22A12Q96S37 553 aa28.8■■■□□ 2.2
SH3GL3-204ENST00000492099 GREB1Q4ZG55 1949 aa28.79■■■□□ 2.2
SH3GL3-204ENST00000492099 ZNF840PA6NDX5 716 aa28.79■■■□□ 2.2
SH3GL3-204ENST00000492099 PRR23AA6NEV1 266 aa28.79■■■□□ 2.2
SH3GL3-204ENST00000492099 SLC16A3O15427 465 aaKnown RBP28.79■■■□□ 2.2
SH3GL3-204ENST00000492099 RTN3O95197 1032 aaPredicted RBP28.79■■■□□ 2.2
SH3GL3-204ENST00000492099 LRRC63Q05C16 580 aa28.79■■■□□ 2.2
SH3GL3-204ENST00000492099 MTAPQ13126 283 aa28.79■■■□□ 2.2
SH3GL3-204ENST00000492099 STIM1Q13586 685 aa28.79■■■□□ 2.2
SH3GL3-204ENST00000492099 LRRC32Q14392 662 aa28.79■■■□□ 2.2
SH3GL3-204ENST00000492099 MTF1Q14872 753 aa28.79■■■□□ 2.2
SH3GL3-204ENST00000492099 PDGFRLQ15198 375 aa28.79■■■□□ 2.2
SH3GL3-204ENST00000492099 ANKRD40Q6AI12 368 aa28.79■■■□□ 2.2
SH3GL3-204ENST00000492099 PAQR9Q6ZVX9 377 aa28.79■■■□□ 2.2
SH3GL3-204ENST00000492099 ASCL5Q7RTU5 278 aa28.79■■■□□ 2.2
SH3GL3-204ENST00000492099 NIF3L1Q9GZT8 377 aa28.79■■■□□ 2.2
SH3GL3-204ENST00000492099 APOBEC3GQ9HC16 384 aaKnown RBP28.79■■■□□ 2.2
SH3GL3-204ENST00000492099 DMAP1Q9NPF5 467 aaPredicted RBP28.79■■■□□ 2.2
SH3GL3-204ENST00000492099 ARHGAP26Q9UNA1 814 aa28.79■■■□□ 2.2
SH3GL3-204ENST00000492099 TCF3P15923 654 aa28.78■■■□□ 2.2
SH3GL3-204ENST00000492099 YWHAQP27348 245 aa28.78■■■□□ 2.2
SH3GL3-204ENST00000492099 PPP1R2P41236 205 aa28.78■■■□□ 2.2
SH3GL3-204ENST00000492099 CSTF1Q05048 431 aaKnown RBP28.78■■■□□ 2.2
SH3GL3-204ENST00000492099 INCA1Q0VD86 236 aa28.78■■■□□ 2.2
SH3GL3-204ENST00000492099 TAF10Q12962 218 aa28.78■■■□□ 2.2
SH3GL3-204ENST00000492099 ZNF77Q15935 545 aa28.78■■■□□ 2.2
SH3GL3-204ENST00000492099 TXNDC11Q6PKC3 985 aa28.78■■■□□ 2.2
SH3GL3-204ENST00000492099 ZC3H3Q8IXZ2 948 aaKnown RBP28.78■■■□□ 2.2
SH3GL3-204ENST00000492099 FUKQ8N0W3 1084 aa28.78■■■□□ 2.2
SH3GL3-204ENST00000492099 RIN3Q8TB24 985 aa28.78■■■□□ 2.2
SH3GL3-204ENST00000492099 FAXDC2Q96IV6 333 aa28.78■■■□□ 2.2
SH3GL3-204ENST00000492099 KCNK16Q96T55 309 aa28.78■■■□□ 2.2
SH3GL3-204ENST00000492099 DNAI2Q9GZS0 605 aa28.78■■■□□ 2.2
SH3GL3-204ENST00000492099 EBF3Q9H4W6 596 aa28.78■■■□□ 2.2
SH3GL3-204ENST00000492099 HPS4Q9NQG7 708 aa28.78■■■□□ 2.2
SH3GL3-204ENST00000492099 UTP3Q9NQZ2 479 aaKnown RBP eCLIP28.78■■■□□ 2.25e-10■■■■■ 83.7
SH3GL3-204ENST00000492099 ZNF638Q14966 1978 aaKnown RBP28.77■■■□□ 2.2
SH3GL3-204ENST00000492099 MXI1P50539 228 aa28.77■■■□□ 2.2
SH3GL3-204ENST00000492099 AMPD2Q01433 879 aa28.77■■■□□ 2.2
SH3GL3-204ENST00000492099 USP4Q13107 963 aa28.77■■■□□ 2.2
SH3GL3-204ENST00000492099 DGKKQ5KSL6 1271 aa28.77■■■□□ 2.2
SH3GL3-204ENST00000492099 TRIM68Q6AZZ1 485 aa28.77■■■□□ 2.2
SH3GL3-204ENST00000492099 PDZD8Q8NEN9 1154 aa28.77■■■□□ 2.2
SH3GL3-204ENST00000492099 OVCA2Q8WZ82 227 aa28.77■■■□□ 2.2
SH3GL3-204ENST00000492099 PRMT8Q9NR22 394 aaPredicted RBP28.77■■■□□ 2.2
SH3GL3-204ENST00000492099 HMGXB4Q9UGU5 601 aa28.77■■■□□ 2.2
SH3GL3-204ENST00000492099 R4GN57 208 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms