RNA–Protein interactions for RNA: ENST00000491701.1

CLIP4-211, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-211ENST00000491701 TECP42680 631 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 ME1P48163 572 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 PRIM2P49643 509 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 ADKP55263 362 aaKnown RBP4.92□□□□□ -1.62
CLIP4-211ENST00000491701 ORC2Q13416 577 aaPredicted RBP4.92□□□□□ -1.62
CLIP4-211ENST00000491701 PNOCQ13519 176 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 KARSQ15046 597 aaKnown RBP4.92□□□□□ -1.62
CLIP4-211ENST00000491701 IFI16Q16666 785 aaKnown RBP4.92□□□□□ -1.62
CLIP4-211ENST00000491701 CLEC16AQ2KHT3 1053 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 PRSS53Q2L4Q9 553 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 CCDC38Q502W7 563 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 CCDC183Q5T5S1 534 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 SNRNP48Q6IEG0 339 aaKnown RBP4.92□□□□□ -1.62
CLIP4-211ENST00000491701 DENND5AQ6IQ26 1287 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 TAPT1Q6NXT6 567 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 CCDC62Q6P9F0 684 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 C11orf57Q6ZUT1 292 aaPredicted RBP4.92□□□□□ -1.62
CLIP4-211ENST00000491701 NIPA1Q7RTP0 329 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 APTXQ7Z2E3 356 aaKnown RBP4.92□□□□□ -1.62
CLIP4-211ENST00000491701 TP53INP2Q8IXH6 220 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 C7orf61Q8IZ16 206 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 KIAA0319LQ8IZA0 1049 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 CAMKK1Q8N5S9 505 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 EFHBQ8N7U6 833 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 C2orf69Q8N8R5 385 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 FLCNQ8NFG4 579 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 DNAJB8Q8NHS0 232 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 NPLOC4Q8TAT6 608 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 PPP1R13LQ8WUF5 828 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 FERMT2Q96AC1 680 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 C1GALT1C1Q96EU7 318 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 ASIC4Q96FT7 647 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 HRASLS5Q96KN8 279 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 HSPA12BQ96MM6 686 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 KREMEN1Q96MU8 473 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 INPP4AQ96PE3 977 aaPredicted RBP4.92□□□□□ -1.62
CLIP4-211ENST00000491701 FIZ1Q96SL8 496 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 FGFBP2Q9BYJ0 223 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 CELF4Q9BZC1 486 aaKnown RBP4.92□□□□□ -1.62
CLIP4-211ENST00000491701 MKRN2Q9H000 416 aaKnown RBP4.92□□□□□ -1.62
CLIP4-211ENST00000491701 NUP62CLQ9H1M0 184 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 GP6Q9HCN6 339 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 TOPORSQ9NS56 1045 aaPredicted RBP4.92□□□□□ -1.62
CLIP4-211ENST00000491701 TBC1D22BQ9NU19 505 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 OXSMQ9NWU1 459 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 GPRC5BQ9NZH0 403 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 H2AFY2Q9P0M6 372 aaPredicted RBP4.92□□□□□ -1.62
CLIP4-211ENST00000491701 SEC63Q9UGP8 760 aaKnown RBP4.92□□□□□ -1.62
CLIP4-211ENST00000491701 MAN1B1Q9UKM7 699 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 L1RE1Q9UN81 338 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 PLAGL2Q9UPG8 496 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 TTLL3Q9Y4R7 772 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 PCDHA2Q9Y5H9 948 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 ZNF236Q9UL36 1845 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 KIAA0100Q14667 2235 aaKnown RBP4.92□□□□□ -1.62
CLIP4-211ENST00000491701 BRCA2P51587 3418 aa4.92□□□□□ -1.62
CLIP4-211ENST00000491701 TMEM265A0A087WTH1 108 aa4.91□□□□□ -1.62
CLIP4-211ENST00000491701 IGKV6D-21A0A0A0MT36 114 aa4.91□□□□□ -1.62
CLIP4-211ENST00000491701 CCL15-CCL14A0A0B4J2E2 113 aa4.91□□□□□ -1.62
CLIP4-211ENST00000491701 H3BML4 177 aa4.91□□□□□ -1.62
CLIP4-211ENST00000491701 SHOXO15266 292 aa4.91□□□□□ -1.62
CLIP4-211ENST00000491701 ADCY6O43306 1168 aa4.91□□□□□ -1.62
CLIP4-211ENST00000491701 TGM5O43548 720 aa4.91□□□□□ -1.62
CLIP4-211ENST00000491701 CCNT1O60563 726 aaKnown RBP4.91□□□□□ -1.62
CLIP4-211ENST00000491701 MAFKO60675 156 aa4.91□□□□□ -1.62
CLIP4-211ENST00000491701 BAIAP3O94812 1187 aa4.91□□□□□ -1.62
CLIP4-211ENST00000491701 TBC1D8O95759 1140 aa4.91□□□□□ -1.62
CLIP4-211ENST00000491701 SNAI1O95863 264 aaPredicted RBP4.91□□□□□ -1.62
CLIP4-211ENST00000491701 CD4P01730 458 aa4.91□□□□□ -1.62
CLIP4-211ENST00000491701 SRGAP2CP0DJJ0 459 aa4.91□□□□□ -1.62
CLIP4-211ENST00000491701 ZBTB48P10074 688 aaPredicted RBP4.91□□□□□ -1.62
CLIP4-211ENST00000491701 XBP1P17861 261 aa4.91□□□□□ -1.62
CLIP4-211ENST00000491701 ABCB4P21439 1286 aa4.91□□□□□ -1.62
CLIP4-211ENST00000491701 GRK2P25098 689 aa4.91□□□□□ -1.62
CLIP4-211ENST00000491701 PEX2P28328 305 aa4.91□□□□□ -1.62
CLIP4-211ENST00000491701 LONP1P36776 959 aaKnown RBP4.91□□□□□ -1.62
CLIP4-211ENST00000491701 PIK3CBP42338 1070 aa4.91□□□□□ -1.62
CLIP4-211ENST00000491701 HUNKP57058 714 aa4.91□□□□□ -1.62
CLIP4-211ENST00000491701 SNAPC2Q13487 334 aa4.91□□□□□ -1.62
CLIP4-211ENST00000491701 CUL4BQ13620 913 aa4.91□□□□□ -1.62
CLIP4-211ENST00000491701 AUHQ13825 339 aaKnown RBP4.91□□□□□ -1.62
CLIP4-211ENST00000491701 TAF11Q15544 211 aa4.91□□□□□ -1.62
CLIP4-211ENST00000491701 CCL15Q16663 113 aa4.91□□□□□ -1.62
CLIP4-211ENST00000491701 UGCGQ16739 394 aa4.91□□□□□ -1.62
CLIP4-211ENST00000491701 CEP55Q53EZ4 464 aa4.91□□□□□ -1.62
CLIP4-211ENST00000491701 RNF220Q5VTB9 566 aa4.91□□□□□ -1.62
CLIP4-211ENST00000491701 RGMBQ6NW40 437 aa4.91□□□□□ -1.62
CLIP4-211ENST00000491701 ZNF574Q6ZN55 896 aaPredicted RBP4.91□□□□□ -1.62
CLIP4-211ENST00000491701 RNF207Q6ZRF8 634 aa4.91□□□□□ -1.62
CLIP4-211ENST00000491701 PDZD4Q76G19 769 aaPredicted RBP4.91□□□□□ -1.62
CLIP4-211ENST00000491701 FAM214BQ7L5A3 538 aa4.91□□□□□ -1.62
CLIP4-211ENST00000491701 FASTKD5Q7L8L6 764 aaKnown RBP4.91□□□□□ -1.62
CLIP4-211ENST00000491701 ZSCAN30Q86W11 494 aa4.91□□□□□ -1.62
CLIP4-211ENST00000491701 CATSPER3Q86XQ3 398 aa4.91□□□□□ -1.62
CLIP4-211ENST00000491701 IRF2BP1Q8IU81 584 aa4.91□□□□□ -1.62
CLIP4-211ENST00000491701 DHX40Q8IX18 779 aaKnown RBP4.91□□□□□ -1.62
CLIP4-211ENST00000491701 SHCBP1Q8NEM2 672 aa4.91□□□□□ -1.62
CLIP4-211ENST00000491701 CHST13Q8NET6 341 aa4.91□□□□□ -1.62
CLIP4-211ENST00000491701 ZSCAN18Q8TBC5 510 aaPredicted RBP4.91□□□□□ -1.62
CLIP4-211ENST00000491701 BICD2Q8TD16 824 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms