RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 PRDM4Q9UKN5 801 aa14.66□□□□□ -0.06
SMPD4-219ENST00000491128 CCDC66A2RUB6 948 aa14.65□□□□□ -0.06
SMPD4-219ENST00000491128 MIF4GDA9UHW6 222 aaKnown RBP14.65□□□□□ -0.06
SMPD4-219ENST00000491128 NRP1O14786 923 aa14.65□□□□□ -0.06
SMPD4-219ENST00000491128 ODC1P11926 461 aa14.65□□□□□ -0.06
SMPD4-219ENST00000491128 PDGFRAP16234 1089 aa14.65□□□□□ -0.06
SMPD4-219ENST00000491128 BDNFP23560 247 aa14.65□□□□□ -0.06
SMPD4-219ENST00000491128 AARSP49588 968 aaKnown RBP eCLIP14.65□□□□□ -0.06
SMPD4-219ENST00000491128 DSC1Q08554 894 aa14.65□□□□□ -0.06
SMPD4-219ENST00000491128 ADIGQ0VDE8 80 aa14.65□□□□□ -0.06
SMPD4-219ENST00000491128 IFRD2Q12894 506 aaPredicted RBP14.65□□□□□ -0.06
SMPD4-219ENST00000491128 OVOS1Q6IE37 1185 aa14.65□□□□□ -0.06
SMPD4-219ENST00000491128 DCLRE1AQ6PJP8 1040 aa14.65□□□□□ -0.06
SMPD4-219ENST00000491128 OLFML1Q6UWY5 402 aa14.65□□□□□ -0.06
SMPD4-219ENST00000491128 CLEC20AQ6ZU45 233 aa14.65□□□□□ -0.06
SMPD4-219ENST00000491128 KHSRPQ92945 711 aaKnown RBP eCLIP14.65□□□□□ -0.06
SMPD4-219ENST00000491128 MCRS1Q96EZ8 462 aa14.65□□□□□ -0.06
SMPD4-219ENST00000491128 MAGEB5Q9BZ81 275 aa14.65□□□□□ -0.06
SMPD4-219ENST00000491128 RAD51CO43502 376 aa14.65□□□□□ -0.06
SMPD4-219ENST00000491128 LRCH4O75427 683 aa14.65□□□□□ -0.06
SMPD4-219ENST00000491128 TADA2AO75478 443 aa14.65□□□□□ -0.06
SMPD4-219ENST00000491128 AP1G2O75843 785 aa14.65□□□□□ -0.06
SMPD4-219ENST00000491128 GLI1P08151 1106 aa14.65□□□□□ -0.06
SMPD4-219ENST00000491128 GABRB2P47870 512 aa14.65□□□□□ -0.06
SMPD4-219ENST00000491128 BCAT1P54687 386 aa14.65□□□□□ -0.06
SMPD4-219ENST00000491128 ZNF268Q14587 947 aaPredicted RBP14.65□□□□□ -0.06
SMPD4-219ENST00000491128 C8orf74Q6P047 294 aa14.65□□□□□ -0.06
SMPD4-219ENST00000491128 ATG4AQ8WYN0 398 aa14.65□□□□□ -0.06
SMPD4-219ENST00000491128 SLC4A5Q9BY07 1137 aa14.65□□□□□ -0.06
SMPD4-219ENST00000491128 GPR62Q9BZJ7 368 aa14.65□□□□□ -0.06
SMPD4-219ENST00000491128 C11orf49Q9H6J7 331 aa14.65□□□□□ -0.06
SMPD4-219ENST00000491128 TBX21Q9UL17 535 aa14.65□□□□□ -0.06
SMPD4-219ENST00000491128 SYNJ2BP-COX16A0A087WUM0 186 aa14.64□□□□□ -0.07
SMPD4-219ENST00000491128 CLTBP09497 229 aa14.64□□□□□ -0.07
SMPD4-219ENST00000491128 KCNJ1P48048 391 aa14.64□□□□□ -0.07
SMPD4-219ENST00000491128 LHX1P48742 406 aa14.64□□□□□ -0.07
SMPD4-219ENST00000491128 ARPP19P56211 112 aa14.64□□□□□ -0.07
SMPD4-219ENST00000491128 SNX1Q13596 522 aa14.64□□□□□ -0.07
SMPD4-219ENST00000491128 C1orf54Q8WWF1 131 aa14.64□□□□□ -0.07
SMPD4-219ENST00000491128 RAPGEF5Q92565 580 aa14.64□□□□□ -0.07
SMPD4-219ENST00000491128 MYLPFQ96A32 169 aa14.64□□□□□ -0.07
SMPD4-219ENST00000491128 ARMC5Q96C12 935 aa14.64□□□□□ -0.07
SMPD4-219ENST00000491128 PGLYRP2Q96PD5 576 aa14.64□□□□□ -0.07
SMPD4-219ENST00000491128 SMOQ99835 787 aa14.64□□□□□ -0.07
SMPD4-219ENST00000491128 ZNF446Q9NWS9 450 aa14.64□□□□□ -0.07
SMPD4-219ENST00000491128 COX16Q9P0S2 106 aa14.64□□□□□ -0.07
SMPD4-219ENST00000491128 SART1O43290 800 aaKnown RBP14.64□□□□□ -0.07
SMPD4-219ENST00000491128 CD48P09326 243 aa14.64□□□□□ -0.07
SMPD4-219ENST00000491128 RALAP11233 206 aa14.64□□□□□ -0.07
SMPD4-219ENST00000491128 EN2P19622 333 aaPredicted RBP14.64□□□□□ -0.07
SMPD4-219ENST00000491128 SLC11A1P49279 550 aa14.64□□□□□ -0.07
SMPD4-219ENST00000491128 SEL1L2Q5TEA6 688 aa14.64□□□□□ -0.07
SMPD4-219ENST00000491128 SDHAF4Q5VUM1 108 aa14.64□□□□□ -0.07
SMPD4-219ENST00000491128 SCYL2Q6P3W7 929 aa14.64□□□□□ -0.07
SMPD4-219ENST00000491128 TAS1R1Q7RTX1 841 aa14.64□□□□□ -0.07
SMPD4-219ENST00000491128 ZNF572Q7Z3I7 529 aaPredicted RBP14.64□□□□□ -0.07
SMPD4-219ENST00000491128 TMEM110Q86TL2 294 aa14.64□□□□□ -0.07
SMPD4-219ENST00000491128 FAM35AQ86V20 835 aa14.64□□□□□ -0.07
SMPD4-219ENST00000491128 MMGT1Q8N4V1 131 aa14.64□□□□□ -0.07
SMPD4-219ENST00000491128 ZMIZ2Q8NF64 920 aa14.64□□□□□ -0.07
SMPD4-219ENST00000491128 FAM149B1Q96BN6 582 aa14.64□□□□□ -0.07
SMPD4-219ENST00000491128 HNRNPABQ99729 332 aaKnown RBP14.64□□□□□ -0.07
SMPD4-219ENST00000491128 DUSP16Q9BY84 665 aa14.64□□□□□ -0.07
SMPD4-219ENST00000491128 TRIM31Q9BZY9 425 aa14.64□□□□□ -0.07
SMPD4-219ENST00000491128 TMEM59LQ9UK28 342 aa14.64□□□□□ -0.07
SMPD4-219ENST00000491128 H2AFXP16104 143 aaPredicted RBP14.63□□□□□ -0.07
SMPD4-219ENST00000491128 NPR3P17342 541 aa14.63□□□□□ -0.07
SMPD4-219ENST00000491128 CTNNA2P26232 953 aa14.63□□□□□ -0.07
SMPD4-219ENST00000491128 SLC1A1P43005 524 aa14.63□□□□□ -0.07
SMPD4-219ENST00000491128 PITX1P78337 314 aaPredicted RBP14.63□□□□□ -0.07
SMPD4-219ENST00000491128 SMC1AQ14683 1233 aaKnown RBP14.63□□□□□ -0.07
SMPD4-219ENST00000491128 STILQ15468 1287 aa14.63□□□□□ -0.07
SMPD4-219ENST00000491128 HFE2Q6ZVN8 426 aa14.63□□□□□ -0.07
SMPD4-219ENST00000491128 DDX42Q86XP3 938 aaKnown RBP eCLIP14.63□□□□□ -0.07
SMPD4-219ENST00000491128 RHOT1Q8IXI2 618 aa14.63□□□□□ -0.07
SMPD4-219ENST00000491128 MSANTD4Q8NCY6 345 aa14.63□□□□□ -0.07
SMPD4-219ENST00000491128 BCL7CQ8WUZ0 217 aaPredicted RBP14.63□□□□□ -0.07
SMPD4-219ENST00000491128 HSPH1Q92598 858 aa14.63□□□□□ -0.07
SMPD4-219ENST00000491128 HAUS1Q96CS2 278 aa14.63□□□□□ -0.07
SMPD4-219ENST00000491128 NGRNQ9NPE2 291 aaKnown RBP14.63□□□□□ -0.07
SMPD4-219ENST00000491128 GPATCH2LQ9NWQ4 482 aa14.63□□□□□ -0.07
SMPD4-219ENST00000491128 RARAP10276 462 aa14.63□□□□□ -0.07
SMPD4-219ENST00000491128 DEFB103AP81534 67 aa14.63□□□□□ -0.07
SMPD4-219ENST00000491128 SLC6A3Q01959 620 aa14.63□□□□□ -0.07
SMPD4-219ENST00000491128 GUCY2DQ02846 1103 aa14.63□□□□□ -0.07
SMPD4-219ENST00000491128 YWHAHQ04917 246 aaPredicted RBP14.63□□□□□ -0.07
SMPD4-219ENST00000491128 CCDC14Q49A88 953 aa14.63□□□□□ -0.07
SMPD4-219ENST00000491128 FAM171A1Q5VUB5 890 aa14.63□□□□□ -0.07
SMPD4-219ENST00000491128 OTOP2Q7RTS6 562 aa14.63□□□□□ -0.07
SMPD4-219ENST00000491128 METTL23Q86XA0 190 aa14.63□□□□□ -0.07
SMPD4-219ENST00000491128 TMEM86AQ8N2M4 240 aa14.63□□□□□ -0.07
SMPD4-219ENST00000491128 SUSD3Q96L08 255 aa14.63□□□□□ -0.07
SMPD4-219ENST00000491128 TOX2Q96NM4 488 aa14.63□□□□□ -0.07
SMPD4-219ENST00000491128 CALCOCO1Q9P1Z2 691 aa14.63□□□□□ -0.07
SMPD4-219ENST00000491128 RNF14Q9UBS8 474 aa14.63□□□□□ -0.07
SMPD4-219ENST00000491128 R3HDM2Q9Y2K5 976 aaKnown RBP14.63□□□□□ -0.07
SMPD4-219ENST00000491128 M0QZQ0 153 aa14.62□□□□□ -0.07
SMPD4-219ENST00000491128 TTI1O43156 1089 aa14.62□□□□□ -0.07
SMPD4-219ENST00000491128 KRT1P04264 644 aa14.62□□□□□ -0.07
SMPD4-219ENST00000491128 FAM200BP0CF97 657 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms