RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 PLCB2Q00722 1185 aa16.17■□□□□ 0.18
COL27A1-206ENST00000490831 FZD5Q13467 585 aa16.17■□□□□ 0.18
COL27A1-206ENST00000490831 ISM2Q6H9L7 571 aa16.17■□□□□ 0.18
COL27A1-206ENST00000490831 FILIP1Q7Z7B0 1213 aa16.17■□□□□ 0.18
COL27A1-206ENST00000490831 ACOT1Q86TX2 421 aa16.17■□□□□ 0.18
COL27A1-206ENST00000490831 YAF2Q8IY57 180 aa16.17■□□□□ 0.18
COL27A1-206ENST00000490831 FUKQ8N0W3 1084 aa16.17■□□□□ 0.18
COL27A1-206ENST00000490831 TRIML1Q8N9V2 468 aa16.17■□□□□ 0.18
COL27A1-206ENST00000490831 CLDN23Q96B33 292 aa16.17■□□□□ 0.18
COL27A1-206ENST00000490831 MSANTD3Q96H12 275 aa16.17■□□□□ 0.18
COL27A1-206ENST00000490831 DUSP9Q99956 384 aaKnown RBP16.17■□□□□ 0.18
COL27A1-206ENST00000490831 SMG9Q9H0W8 520 aaKnown RBP16.17■□□□□ 0.18
COL27A1-206ENST00000490831 FAM124BQ9H5Z6 455 aaPredicted RBP16.17■□□□□ 0.18
COL27A1-206ENST00000490831 TDP1Q9NUW8 608 aa16.17■□□□□ 0.18
COL27A1-206ENST00000490831 RAB20Q9NX57 234 aa16.17■□□□□ 0.18
COL27A1-206ENST00000490831 IL37Q9NZH6 218 aa16.17■□□□□ 0.18
COL27A1-206ENST00000490831 GCNT4Q9P109 453 aa16.17■□□□□ 0.18
COL27A1-206ENST00000490831 CCL26Q9Y258 94 aa16.17■□□□□ 0.18
COL27A1-206ENST00000490831 MRPS17Q9Y2R5 130 aaKnown RBP16.17■□□□□ 0.18
COL27A1-206ENST00000490831 MTF2Q9Y483 593 aaPredicted RBP16.17■□□□□ 0.18
COL27A1-206ENST00000490831 TICRRQ7Z2Z1 1910 aa16.17■□□□□ 0.18
COL27A1-206ENST00000490831 MIA3Q5JRA6 1907 aa16.16■□□□□ 0.18
COL27A1-206ENST00000490831 FAM170BA6NMN3 283 aa16.16■□□□□ 0.18
COL27A1-206ENST00000490831 TNFRSF10BO14763 440 aa16.16■□□□□ 0.18
COL27A1-206ENST00000490831 CILPO75339 1184 aa16.16■□□□□ 0.18
COL27A1-206ENST00000490831 CLSTN1O94985 981 aa16.16■□□□□ 0.18
COL27A1-206ENST00000490831 TCF3P15923 654 aa16.16■□□□□ 0.18
COL27A1-206ENST00000490831 CD72P21854 359 aa16.16■□□□□ 0.18
COL27A1-206ENST00000490831 TARSP26639 723 aaKnown RBP16.16■□□□□ 0.18
COL27A1-206ENST00000490831 HOXD11P31277 338 aaPredicted RBP16.16■□□□□ 0.18
COL27A1-206ENST00000490831 RPS9P46781 194 aaKnown RBP16.16■□□□□ 0.18
COL27A1-206ENST00000490831 CBWD6Q4V339 395 aa16.16■□□□□ 0.18
COL27A1-206ENST00000490831 CBWD3Q5JTY5 395 aa16.16■□□□□ 0.18
COL27A1-206ENST00000490831 CBWD5Q5RIA9 395 aa16.16■□□□□ 0.18
COL27A1-206ENST00000490831 C1orf228Q6PIY5 440 aa16.16■□□□□ 0.18
COL27A1-206ENST00000490831 FRMD5Q7Z6J6 570 aa16.16■□□□□ 0.18
COL27A1-206ENST00000490831 GPIHBP1Q8IV16 184 aa16.16■□□□□ 0.18
COL27A1-206ENST00000490831 CCDC150Q8NCX0 1101 aa16.16■□□□□ 0.18
COL27A1-206ENST00000490831 WHAMMQ8TF30 809 aa16.16■□□□□ 0.18
COL27A1-206ENST00000490831 SLC35C1Q96A29 364 aa16.16■□□□□ 0.18
COL27A1-206ENST00000490831 SMARCD1Q96GM5 515 aa16.16■□□□□ 0.18
COL27A1-206ENST00000490831 C8orf33Q9H7E9 229 aaPredicted RBP16.16■□□□□ 0.18
COL27A1-206ENST00000490831 MMRN2Q9H8L6 949 aa16.16■□□□□ 0.18
COL27A1-206ENST00000490831 METTL14Q9HCE5 456 aaKnown RBP16.16■□□□□ 0.18
COL27A1-206ENST00000490831 CSNK1G1Q9HCP0 422 aa16.16■□□□□ 0.18
COL27A1-206ENST00000490831 THG1LQ9NWX6 298 aaKnown RBP16.16■□□□□ 0.18
COL27A1-206ENST00000490831 ARMCX3Q9UH62 379 aaPredicted RBP16.16■□□□□ 0.18
COL27A1-206ENST00000490831 PIAS3Q9Y6X2 628 aa16.16■□□□□ 0.18
COL27A1-206ENST00000490831 ZNF638Q14966 1978 aaKnown RBP16.16■□□□□ 0.18
COL27A1-206ENST00000490831 TRAV19A0A0A6YYK7 116 aa16.15■□□□□ 0.18
COL27A1-206ENST00000490831 BICDL2A1A5D9 508 aa16.15■□□□□ 0.18
COL27A1-206ENST00000490831 FAM92AA1XBS5 289 aa16.15■□□□□ 0.18
COL27A1-206ENST00000490831 ZNF840PA6NDX5 716 aa16.15■□□□□ 0.18
COL27A1-206ENST00000490831 H0Y858 1186 aa16.15■□□□□ 0.18
COL27A1-206ENST00000490831 PMM2O15305 246 aa16.15■□□□□ 0.18
COL27A1-206ENST00000490831 USP17L7P0C7H9 530 aa16.15■□□□□ 0.18
COL27A1-206ENST00000490831 PDE6CP51160 858 aa16.15■□□□□ 0.18
COL27A1-206ENST00000490831 UBXN2BQ14CS0 331 aa16.15■□□□□ 0.18
COL27A1-206ENST00000490831 ANGPT1Q15389 498 aa16.15■□□□□ 0.18
COL27A1-206ENST00000490831 NUP93Q8N1F7 819 aa16.15■□□□□ 0.18
COL27A1-206ENST00000490831 TTC39CQ8N584 583 aa16.15■□□□□ 0.18
COL27A1-206ENST00000490831 RIN3Q8TB24 985 aa16.15■□□□□ 0.18
COL27A1-206ENST00000490831 CSGALNACT1Q8TDX6 532 aa16.15■□□□□ 0.18
COL27A1-206ENST00000490831 NELFBQ8WX92 580 aa16.15■□□□□ 0.18
COL27A1-206ENST00000490831 OVCA2Q8WZ82 227 aa16.15■□□□□ 0.18
COL27A1-206ENST00000490831 TWNKQ96RR1 684 aa16.15■□□□□ 0.18
COL27A1-206ENST00000490831 SLC22A12Q96S37 553 aa16.15■□□□□ 0.18
COL27A1-206ENST00000490831 KCNK16Q96T55 309 aa16.15■□□□□ 0.18
COL27A1-206ENST00000490831 HNRNPABQ99729 332 aaKnown RBP16.15■□□□□ 0.18
COL27A1-206ENST00000490831 FAM83CQ9BQN1 747 aa16.15■□□□□ 0.18
COL27A1-206ENST00000490831 NT5C1AQ9BXI3 368 aa16.15■□□□□ 0.18
COL27A1-206ENST00000490831 DMAP1Q9NPF5 467 aaPredicted RBP16.15■□□□□ 0.18
COL27A1-206ENST00000490831 COMMD8Q9NX08 183 aa16.15■□□□□ 0.18
COL27A1-206ENST00000490831 TRPM5Q9NZQ8 1165 aa16.15■□□□□ 0.18
COL27A1-206ENST00000490831 KIAA1468Q9P260 1216 aa16.15■□□□□ 0.18
COL27A1-206ENST00000490831 C2orf78A6NCI8 922 aa16.14■□□□□ 0.17
COL27A1-206ENST00000490831 BIN1O00499 593 aa16.14■□□□□ 0.17
COL27A1-206ENST00000490831 NCAM2O15394 837 aa16.14■□□□□ 0.17
COL27A1-206ENST00000490831 RTN3O95197 1032 aaPredicted RBP16.14■□□□□ 0.17
COL27A1-206ENST00000490831 OLFM2O95897 454 aa16.14■□□□□ 0.17
COL27A1-206ENST00000490831 CCDC130P13994 396 aa16.14■□□□□ 0.17
COL27A1-206ENST00000490831 TRIM21P19474 475 aaKnown RBP16.14■□□□□ 0.17
COL27A1-206ENST00000490831 USP4Q13107 963 aa16.14■□□□□ 0.17
COL27A1-206ENST00000490831 ORC1Q13415 861 aa16.14■□□□□ 0.17
COL27A1-206ENST00000490831 ZNF77Q15935 545 aa16.14■□□□□ 0.17
COL27A1-206ENST00000490831 DCAF17Q5H9S7 520 aaPredicted RBP16.14■□□□□ 0.17
COL27A1-206ENST00000490831 TCERG1LQ5VWI1 586 aa16.14■□□□□ 0.17
COL27A1-206ENST00000490831 C12orf29Q8N999 325 aa16.14■□□□□ 0.17
COL27A1-206ENST00000490831 ZMIZ2Q8NF64 920 aa16.14■□□□□ 0.17
COL27A1-206ENST00000490831 SLC2A14Q8TDB8 520 aa16.14■□□□□ 0.17
COL27A1-206ENST00000490831 FAM3CQ92520 227 aa16.14■□□□□ 0.17
COL27A1-206ENST00000490831 ZFYVE19Q96K21 471 aa16.14■□□□□ 0.17
COL27A1-206ENST00000490831 CYP2S1Q96SQ9 504 aa16.14■□□□□ 0.17
COL27A1-206ENST00000490831 SMOQ99835 787 aa16.14■□□□□ 0.17
COL27A1-206ENST00000490831 MED10Q9BTT4 135 aa16.14■□□□□ 0.17
COL27A1-206ENST00000490831 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.14■□□□□ 0.17
COL27A1-206ENST00000490831 KRT82Q9NSB4 513 aa16.14■□□□□ 0.17
COL27A1-206ENST00000490831 ARHGAP26Q9UNA1 814 aa16.14■□□□□ 0.17
COL27A1-206ENST00000490831 CACNA1IQ9P0X4 2223 aa16.13■□□□□ 0.17
COL27A1-206ENST00000490831 PROB1E7EW31 1015 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms