RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 NFIBO00712 420 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 LIASO43766 372 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 TBX10O75333 385 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 HIRAP54198 1017 aaPredicted RBP13.35□□□□□ -0.27
SHOX2-205ENST00000490689 USP4Q13107 963 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 PCDHA2Q9Y5H9 948 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 PCDHAC2Q9Y5I4 1007 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 ADGRA3Q8IWK6 1321 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 A8MXQ7 604 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 HNRNPRO43390 633 aaKnown RBP13.35□□□□□ -0.27
SHOX2-205ENST00000490689 AVILO75366 819 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 GPC3P51654 580 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 ACTR2P61160 394 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 ITKQ08881 620 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 TBL3Q12788 808 aaKnown RBP13.35□□□□□ -0.27
SHOX2-205ENST00000490689 OASLQ15646 514 aaKnown RBP13.35□□□□□ -0.27
SHOX2-205ENST00000490689 HABP4Q5JVS0 413 aaKnown RBP13.35□□□□□ -0.27
SHOX2-205ENST00000490689 ACBD5Q5T8D3 534 aaPredicted RBP13.35□□□□□ -0.27
SHOX2-205ENST00000490689 PID1Q7Z2X4 250 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 PODNQ7Z5L7 613 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 APOPT1Q96IL0 206 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 HAUS8Q9BT25 410 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 FBXO40Q9UH90 709 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 SLIT3O75094 1523 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 ZMYM2Q9UBW7 1377 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 LIN7AO14910 233 aaPredicted RBP13.35□□□□□ -0.27
SHOX2-205ENST00000490689 FKBP6O75344 327 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 DGAT1O75907 488 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 WFS1O76024 890 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 ASNSP08243 561 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 RINLQ6ZS11 566 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 OR6B3Q8NGW1 331 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 SGF29Q96ES7 293 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 MTMR12Q9C0I1 747 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 ADAM7Q9H2U9 754 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 FEM1BQ9UK73 627 aa13.35□□□□□ -0.27
SHOX2-205ENST00000490689 C6orf222P0C671 652 aaPredicted RBP13.34□□□□□ -0.27
SHOX2-205ENST00000490689 AMPD1P23109 780 aa13.34□□□□□ -0.27
SHOX2-205ENST00000490689 EEF1DP29692 281 aaKnown RBP13.34□□□□□ -0.27
SHOX2-205ENST00000490689 KIF19Q2TAC6 998 aa13.34□□□□□ -0.27
SHOX2-205ENST00000490689 EML3Q32P44 896 aa13.34□□□□□ -0.27
SHOX2-205ENST00000490689 TKFCQ3LXA3 575 aa13.34□□□□□ -0.27
SHOX2-205ENST00000490689 KCTD21Q4G0X4 260 aa13.34□□□□□ -0.27
SHOX2-205ENST00000490689 IFNEQ86WN2 208 aa13.34□□□□□ -0.27
SHOX2-205ENST00000490689 ZBTB45Q96K62 511 aaPredicted RBP13.34□□□□□ -0.27
SHOX2-205ENST00000490689 MPHOSPH6Q99547 160 aaKnown RBP13.34□□□□□ -0.27
SHOX2-205ENST00000490689 ECSITQ9BQ95 431 aa13.34□□□□□ -0.27
SHOX2-205ENST00000490689 MED10Q9BTT4 135 aa13.34□□□□□ -0.27
SHOX2-205ENST00000490689 MYH7BA7E2Y1 1941 aa13.34□□□□□ -0.27
SHOX2-205ENST00000490689 PRR5-ARHGAP8B1AHC4 643 aa13.34□□□□□ -0.27
SHOX2-205ENST00000490689 ASMTLO95671 621 aa13.34□□□□□ -0.27
SHOX2-205ENST00000490689 CETPP11597 493 aa13.34□□□□□ -0.27
SHOX2-205ENST00000490689 RPS6KA3P51812 740 aa13.34□□□□□ -0.27
SHOX2-205ENST00000490689 RPS6P62753 249 aaKnown RBP13.34□□□□□ -0.27
SHOX2-205ENST00000490689 ARHGAP8P85298 464 aa13.34□□□□□ -0.27
SHOX2-205ENST00000490689 PRKCEQ02156 737 aa13.34□□□□□ -0.27
SHOX2-205ENST00000490689 MAMLD1Q13495 774 aa13.34□□□□□ -0.27
SHOX2-205ENST00000490689 BMT2Q1RMZ1 405 aa13.34□□□□□ -0.27
SHOX2-205ENST00000490689 SLC44A4Q53GD3 710 aa13.34□□□□□ -0.27
SHOX2-205ENST00000490689 FASTKD1Q53R41 847 aaKnown RBP13.34□□□□□ -0.27
SHOX2-205ENST00000490689 SNRNP48Q6IEG0 339 aaKnown RBP13.34□□□□□ -0.27
SHOX2-205ENST00000490689 KDELC2Q7Z4H8 507 aa13.34□□□□□ -0.27
SHOX2-205ENST00000490689 NCAPG2Q86XI2 1143 aa13.34□□□□□ -0.27
SHOX2-205ENST00000490689 SEPT12Q8IYM1 358 aa13.34□□□□□ -0.27
SHOX2-205ENST00000490689 RBM15BQ8NDT2 890 aaKnown RBP13.34□□□□□ -0.27
SHOX2-205ENST00000490689 TAS2R1Q9NYW7 299 aa13.34□□□□□ -0.27
SHOX2-205ENST00000490689 PAK5Q9P286 719 aa13.34□□□□□ -0.27
SHOX2-205ENST00000490689 PAIP2BQ9ULR5 123 aaKnown RBP13.34□□□□□ -0.27
SHOX2-205ENST00000490689 BAZ2AQ9UIF9 1905 aaKnown RBP13.34□□□□□ -0.27
SHOX2-205ENST00000490689 EXTL3O43909 919 aa13.34□□□□□ -0.27
SHOX2-205ENST00000490689 LYNP07948 512 aa13.34□□□□□ -0.27
SHOX2-205ENST00000490689 LINGO3P0C6S8 592 aa13.34□□□□□ -0.27
SHOX2-205ENST00000490689 HOXD13P35453 343 aa13.34□□□□□ -0.27
SHOX2-205ENST00000490689 ZBTB46Q86UZ6 589 aa13.34□□□□□ -0.27
SHOX2-205ENST00000490689 ULK2Q8IYT8 1036 aa13.34□□□□□ -0.27
SHOX2-205ENST00000490689 RNF149Q8NC42 400 aa13.34□□□□□ -0.27
SHOX2-205ENST00000490689 DCUN1D5Q9BTE7 237 aa13.34□□□□□ -0.27
SHOX2-205ENST00000490689 HERC5Q9UII4 1024 aaKnown RBP13.34□□□□□ -0.27
SHOX2-205ENST00000490689 AKT3Q9Y243 479 aa13.34□□□□□ -0.27
SHOX2-205ENST00000490689 AKAP10O43572 662 aa13.33□□□□□ -0.27
SHOX2-205ENST00000490689 FAM155BO75949 473 aa13.33□□□□□ -0.27
SHOX2-205ENST00000490689 TAP1Q03518 808 aa13.33□□□□□ -0.27
SHOX2-205ENST00000490689 SPP2Q13103 211 aa13.33□□□□□ -0.27
SHOX2-205ENST00000490689 ITGA9Q13797 1035 aa13.33□□□□□ -0.27
SHOX2-205ENST00000490689 MARK2Q7KZI7 788 aaKnown RBP13.33□□□□□ -0.27
SHOX2-205ENST00000490689 FAM81AQ8TBF8 368 aa13.33□□□□□ -0.27
SHOX2-205ENST00000490689 IL1RL2Q9HB29 575 aa13.33□□□□□ -0.27
SHOX2-205ENST00000490689 FAM49BQ9NUQ9 324 aa13.33□□□□□ -0.27
SHOX2-205ENST00000490689 FESP07332 822 aa13.33□□□□□ -0.28
SHOX2-205ENST00000490689 MMP10P09238 476 aa13.33□□□□□ -0.28
SHOX2-205ENST00000490689 NLRP11P59045 1033 aaKnown RBP13.33□□□□□ -0.28
SHOX2-205ENST00000490689 MRPS9P82933 396 aaKnown RBP13.33□□□□□ -0.28
SHOX2-205ENST00000490689 CEP41Q9BYV8 373 aa13.33□□□□□ -0.28
SHOX2-205ENST00000490689 UNKQ9C0B0 810 aaKnown RBP13.33□□□□□ -0.28
SHOX2-205ENST00000490689 FAM192AQ9GZU8 254 aa13.33□□□□□ -0.28
SHOX2-205ENST00000490689 FAM96AQ9H5X1 160 aa13.33□□□□□ -0.28
SHOX2-205ENST00000490689 RSAD1Q9HA92 442 aa13.33□□□□□ -0.28
SHOX2-205ENST00000490689 SRGAP2BP0DMP2 458 aa13.33□□□□□ -0.28
SHOX2-205ENST00000490689 CHRNB2P17787 502 aa13.33□□□□□ -0.28
SHOX2-205ENST00000490689 RPL22P35268 128 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms