RNA–Protein interactions for RNA: ENST00000490299.5

RPS6KC1-204, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best)

Gene RPS6KC1, Length 5,154 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-204ENST00000490299 EPS8L3Q8TE67 593 aaKnown RBP3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 ORAI2Q96SN7 254 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 RIT2Q99578 217 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 REEP2Q9BRK0 252 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 C9orf16Q9BUW7 83 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 TMEM117Q9H0C3 514 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 CAAP1Q9H8G2 361 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 HMG20AQ9NP66 347 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 CASS4Q9NQ75 786 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 A1CFQ9NQ94 594 aaKnown RBP3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 ANKEF1Q9NU02 776 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 COMMD8Q9NX08 183 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 TMEM260Q9NX78 707 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 TRIM10Q9UDY6 481 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 KLHL3Q9UH77 587 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 DAPK2Q9UIK4 370 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 KIAA1257Q9ULG3 409 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 USP18Q9UMW8 372 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 IGSF9BQ9UPX0 1349 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 C15orf38-AP3S2A0A0A6YYH1 394 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 HEATR9A2RTY3 570 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 NCAM2O15394 837 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 MAFGO15525 162 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 KRT6AP02538 564 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 KRT6BP04259 564 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 SLC9A1P19634 815 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 KRT6CP48668 564 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 CHN2P52757 468 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 PMS1P54277 932 aaKnown RBP3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 RAB15P59190 212 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 CDK16Q00536 496 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 TSTA3Q13630 321 aaPredicted RBP3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 ZNF235Q14590 738 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 SNRNP35Q16560 246 aaKnown RBP3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 BOLA3Q53S33 107 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 HABP4Q5JVS0 413 aaKnown RBP3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 GRTP1Q5TC63 336 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 ARMC3Q5W041 872 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 SEL1L3Q68CR1 1132 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 AAGABQ6PD74 315 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 PID1Q7Z2X4 250 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 TMC3Q7Z5M5 1100 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 ARPINQ7Z6K5 226 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 CYP4Z1Q86W10 505 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 RTKN2Q8IZC4 609 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 SRBD1Q8N5C6 995 aaKnown RBP3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 AADATQ8N5Z0 425 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 GDPD5Q8WTR4 605 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 TFB1MQ8WVM0 346 aaKnown RBP3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 RIN2Q8WYP3 895 aaPredicted RBP3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 MIEF2Q96C03 454 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 OXNAD1Q96HP4 312 aaPredicted RBP3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 FOPNLQ96NB1 174 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 MCEEQ96PE7 176 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 KLHL25Q9H0H3 589 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 PLGRKTQ9HBL7 147 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 PCDH9Q9HC56 1237 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 TIMMDC1Q9NPL8 285 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 RAB6BQ9NRW1 208 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 NMRK1Q9NWW6 199 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 H2AFY2Q9P0M6 372 aaPredicted RBP3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 PRG3Q9Y2Y8 225 aaPredicted RBP3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 PCDHA10Q9Y5I2 948 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 CASZ1Q86V15 1759 aa3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 ZNF335Q9H4Z2 1342 aaPredicted RBP3.85□□□□□ -1.79
RPS6KC1-204ENST00000490299 MYMKA6NI61 221 aa3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 UBOX5O94941 541 aa3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 GDF11O95390 407 aa3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 PSMG1O95456 288 aa3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 TDP2O95551 362 aa3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 CD4P01730 458 aa3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 RBP1P09455 135 aa3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 HIST1H2AGP0C0S8 130 aaPredicted RBP3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 OCM2P0CE71 109 aa3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 OCMP0CE72 109 aaPredicted RBP3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 PECAM1P16284 738 aaPredicted RBP3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 HIST1H2ADP20671 130 aa3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 KLRC1P26715 233 aa3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 HOXA13P31271 388 aaPredicted RBP3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 NUP62P37198 522 aaPredicted RBP3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 RAD23AP54725 363 aa3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 ADARP55265 1226 aaKnown RBP3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 C21orf59P57076 290 aa3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 CHRNB3Q05901 458 aa3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 TRIM71Q2Q1W2 868 aaKnown RBP3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 SLC45A4Q5BKX6 768 aa3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 TFDP3Q5H9I0 405 aa3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 TTC27Q6P3X3 843 aa3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 FOXR2Q6PJQ5 311 aa3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 ZC3H14Q6PJT7 736 aaKnown RBP3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 RFX8Q6ZV50 586 aa3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 TLK2Q86UE8 772 aa3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 KIAA0825Q8IV33 1275 aa3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 PARD3BQ8TEW8 1205 aa3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 GLMNQ92990 594 aa3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 USP13Q92995 863 aaPredicted RBP3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 HIST1H2AHQ96KK5 128 aa3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 HIST1H2AJQ99878 128 aa3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 GINS4Q9BRT9 223 aa3.84□□□□□ -1.79
RPS6KC1-204ENST00000490299 H2AFJQ9BTM1 129 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms