RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 TMEM30AQ9NV96 361 aa21.01■□□□□ 0.95
SMC4-222ENST00000490207 SPATA6Q9NWH7 488 aaPredicted RBP21.01■□□□□ 0.95
SMC4-222ENST00000490207 HMGXB4Q9UGU5 601 aa21.01■□□□□ 0.95
SMC4-222ENST00000490207 TRIM49BA6NDI0 452 aa21■□□□□ 0.95
SMC4-222ENST00000490207 SLC16A3O15427 465 aaKnown RBP21■□□□□ 0.95
SMC4-222ENST00000490207 USP17L7P0C7H9 530 aa21■□□□□ 0.95
SMC4-222ENST00000490207 CCNE1P24864 410 aa21■□□□□ 0.95
SMC4-222ENST00000490207 GTF2H1P32780 548 aa21■□□□□ 0.95
SMC4-222ENST00000490207 RPS9P46781 194 aaKnown RBP21■□□□□ 0.95
SMC4-222ENST00000490207 SOX9P48436 509 aa21■□□□□ 0.95
SMC4-222ENST00000490207 MXI1P50539 228 aa21■□□□□ 0.95
SMC4-222ENST00000490207 NDST1P52848 882 aa21■□□□□ 0.95
SMC4-222ENST00000490207 LRRC63Q05C16 580 aa21■□□□□ 0.95
SMC4-222ENST00000490207 ORC1Q13415 861 aa21■□□□□ 0.95
SMC4-222ENST00000490207 STIM1Q13586 685 aa21■□□□□ 0.95
SMC4-222ENST00000490207 KRT39Q6A163 491 aa21■□□□□ 0.95
SMC4-222ENST00000490207 C1orf228Q6PIY5 440 aa21■□□□□ 0.95
SMC4-222ENST00000490207 ACOT1Q86TX2 421 aa21■□□□□ 0.95
SMC4-222ENST00000490207 UNC93AQ86WB7 457 aa21■□□□□ 0.95
SMC4-222ENST00000490207 ZC3H3Q8IXZ2 948 aaKnown RBP21■□□□□ 0.95
SMC4-222ENST00000490207 ADSSL1Q8N142 457 aa21■□□□□ 0.95
SMC4-222ENST00000490207 TTC8Q8TAM2 541 aa21■□□□□ 0.95
SMC4-222ENST00000490207 SMARCD1Q96GM5 515 aa21■□□□□ 0.95
SMC4-222ENST00000490207 NIF3L1Q9GZT8 377 aa21■□□□□ 0.95
SMC4-222ENST00000490207 APOBEC3GQ9HC16 384 aaKnown RBP21■□□□□ 0.95
SMC4-222ENST00000490207 GTSE1Q9NYZ3 720 aa21■□□□□ 0.95
SMC4-222ENST00000490207 MAN1B1Q9UKM7 699 aa21■□□□□ 0.95
SMC4-222ENST00000490207 PIEZO1Q92508 2521 aa20.99■□□□□ 0.95
SMC4-222ENST00000490207 C2orf78A6NCI8 922 aa20.99■□□□□ 0.95
SMC4-222ENST00000490207 PROB1E7EW31 1015 aa20.99■□□□□ 0.95
SMC4-222ENST00000490207 STX10O60499 249 aa20.99■□□□□ 0.95
SMC4-222ENST00000490207 PMS1P54277 932 aaKnown RBP20.99■□□□□ 0.95
SMC4-222ENST00000490207 MCCD1P59942 119 aaPredicted RBP20.99■□□□□ 0.95
SMC4-222ENST00000490207 FKBP3Q00688 224 aaKnown RBP20.99■□□□□ 0.95
SMC4-222ENST00000490207 TNK2Q07912 1038 aa20.99■□□□□ 0.95
SMC4-222ENST00000490207 IFRD2Q12894 506 aaPredicted RBP20.99■□□□□ 0.95
SMC4-222ENST00000490207 USP4Q13107 963 aa20.99■□□□□ 0.95
SMC4-222ENST00000490207 ANKRD40Q6AI12 368 aa20.99■□□□□ 0.95
SMC4-222ENST00000490207 FRMD5Q7Z6J6 570 aa20.99■□□□□ 0.95
SMC4-222ENST00000490207 ZNF687Q8N1G0 1237 aa20.99■□□□□ 0.95
SMC4-222ENST00000490207 SLC22A12Q96S37 553 aa20.99■□□□□ 0.95
SMC4-222ENST00000490207 KRT82Q9NSB4 513 aa20.99■□□□□ 0.95
SMC4-222ENST00000490207 TRPM5Q9NZQ8 1165 aa20.99■□□□□ 0.95
SMC4-222ENST00000490207 FANCMQ8IYD8 2048 aa20.99■□□□□ 0.95
SMC4-222ENST00000490207 SPECC1L-ADORA2AF8WAN1 911 aa20.98■□□□□ 0.95
SMC4-222ENST00000490207 PSMA7O14818 248 aa20.98■□□□□ 0.95
SMC4-222ENST00000490207 LAMTOR5O43504 91 aa20.98■□□□□ 0.95
SMC4-222ENST00000490207 CCDC130P13994 396 aa20.98■□□□□ 0.95
SMC4-222ENST00000490207 TRIM21P19474 475 aaKnown RBP20.98■□□□□ 0.95
SMC4-222ENST00000490207 CTHP32929 405 aa20.98■□□□□ 0.95
SMC4-222ENST00000490207 PDE6CP51160 858 aa20.98■□□□□ 0.95
SMC4-222ENST00000490207 INCA1Q0VD86 236 aa20.98■□□□□ 0.95
SMC4-222ENST00000490207 FZD5Q13467 585 aa20.98■□□□□ 0.95
SMC4-222ENST00000490207 DCAF17Q5H9S7 520 aaPredicted RBP20.98■□□□□ 0.95
SMC4-222ENST00000490207 TCERG1LQ5VWI1 586 aa20.98■□□□□ 0.95
SMC4-222ENST00000490207 ISM2Q6H9L7 571 aa20.98■□□□□ 0.95
SMC4-222ENST00000490207 CC2D1AQ6P1N0 951 aaPredicted RBP20.98■□□□□ 0.95
SMC4-222ENST00000490207 RALGPS2Q86X27 583 aaPredicted RBP20.98■□□□□ 0.95
SMC4-222ENST00000490207 ARL14EPQ8N8R7 260 aaPredicted RBP20.98■□□□□ 0.95
SMC4-222ENST00000490207 RIN3Q8TB24 985 aa20.98■□□□□ 0.95
SMC4-222ENST00000490207 CYP3A43Q9HB55 503 aa20.98■□□□□ 0.95
SMC4-222ENST00000490207 DMAP1Q9NPF5 467 aaPredicted RBP20.98■□□□□ 0.95
SMC4-222ENST00000490207 CHMP5Q9NZZ3 219 aa20.98■□□□□ 0.95
SMC4-222ENST00000490207 GCNT4Q9P109 453 aa20.98■□□□□ 0.95
SMC4-222ENST00000490207 F5P12259 2224 aa20.98■□□□□ 0.95
SMC4-222ENST00000490207 MYO15AQ9UKN7 3530 aa20.98■□□□□ 0.95
SMC4-222ENST00000490207 AP1G2O75843 785 aa20.97■□□□□ 0.95
SMC4-222ENST00000490207 RTN3O95197 1032 aaPredicted RBP20.97■□□□□ 0.95
SMC4-222ENST00000490207 PPP1R2P41236 205 aa20.97■□□□□ 0.95
SMC4-222ENST00000490207 MTF1Q14872 753 aa20.97■□□□□ 0.95
SMC4-222ENST00000490207 ZNF77Q15935 545 aa20.97■□□□□ 0.95
SMC4-222ENST00000490207 ITPRIPL2Q3MIP1 535 aa20.97■□□□□ 0.95
SMC4-222ENST00000490207 PAQR9Q6ZVX9 377 aa20.97■□□□□ 0.95
SMC4-222ENST00000490207 FUKQ8N0W3 1084 aa20.97■□□□□ 0.95
SMC4-222ENST00000490207 NUP93Q8N1F7 819 aa20.97■□□□□ 0.95
SMC4-222ENST00000490207 FBXL13Q8NEE6 735 aa20.97■□□□□ 0.95
SMC4-222ENST00000490207 TTC16Q8NEE8 873 aa20.97■□□□□ 0.95
SMC4-222ENST00000490207 SLC2A14Q8TDB8 520 aa20.97■□□□□ 0.95
SMC4-222ENST00000490207 SLITRK1Q96PX8 696 aa20.97■□□□□ 0.95
SMC4-222ENST00000490207 CYP2S1Q96SQ9 504 aa20.97■□□□□ 0.95
SMC4-222ENST00000490207 FAM83CQ9BQN1 747 aa20.97■□□□□ 0.95
SMC4-222ENST00000490207 CHRDQ9H2X0 955 aa20.97■□□□□ 0.95
SMC4-222ENST00000490207 HPS4Q9NQG7 708 aa20.97■□□□□ 0.95
SMC4-222ENST00000490207 GKN1Q9NS71 199 aa20.97■□□□□ 0.95
SMC4-222ENST00000490207 FAM49BQ9NUQ9 324 aa20.97■□□□□ 0.95
SMC4-222ENST00000490207 CACNA1IQ9P0X4 2223 aa20.97■□□□□ 0.95
SMC4-222ENST00000490207 GFRA3O60609 400 aa20.96■□□□□ 0.95
SMC4-222ENST00000490207 SP9P0CG40 484 aa20.96■□□□□ 0.95
SMC4-222ENST00000490207 CD44P16070 742 aaKnown RBP20.96■□□□□ 0.95
SMC4-222ENST00000490207 PFKLP17858 780 aa20.96■□□□□ 0.95
SMC4-222ENST00000490207 HDCP19113 662 aa20.96■□□□□ 0.95
SMC4-222ENST00000490207 CD58P19256 250 aa20.96■□□□□ 0.95
SMC4-222ENST00000490207 PPP3CCP48454 512 aa20.96■□□□□ 0.95
SMC4-222ENST00000490207 TAF10Q12962 218 aa20.96■□□□□ 0.95
SMC4-222ENST00000490207 TRIM68Q6AZZ1 485 aa20.96■□□□□ 0.95
SMC4-222ENST00000490207 TXNDC11Q6PKC3 985 aa20.96■□□□□ 0.95
SMC4-222ENST00000490207 MAML2Q8IZL2 1156 aaPredicted RBP20.96■□□□□ 0.95
SMC4-222ENST00000490207 CRYBG2Q8N1P7 616 aa20.96■□□□□ 0.95
SMC4-222ENST00000490207 SEMA4DQ92854 862 aa20.96■□□□□ 0.95
SMC4-222ENST00000490207 DHTKD1Q96HY7 919 aaPredicted RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms