RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 AVPR1AP37288 418 aa20.3■□□□□ 0.84
EPHB4-207ENST00000489808 NUBP1P53384 320 aa20.3■□□□□ 0.84
EPHB4-207ENST00000489808 FCHO2Q0JRZ9 810 aa20.3■□□□□ 0.84
EPHB4-207ENST00000489808 MLF2Q15773 248 aaPredicted RBP20.3■□□□□ 0.84
EPHB4-207ENST00000489808 TRIM59Q8IWR1 403 aa20.3■□□□□ 0.84
EPHB4-207ENST00000489808 NUP93Q8N1F7 819 aa20.3■□□□□ 0.84
EPHB4-207ENST00000489808 CELF5Q8N6W0 485 aaKnown RBP20.3■□□□□ 0.84
EPHB4-207ENST00000489808 DNASE1L2Q92874 299 aa20.3■□□□□ 0.84
EPHB4-207ENST00000489808 CYFIP2Q96F07 1278 aa20.3■□□□□ 0.84
EPHB4-207ENST00000489808 SMARCD1Q96GM5 515 aa20.3■□□□□ 0.84
EPHB4-207ENST00000489808 HNRNPABQ99729 332 aaKnown RBP20.3■□□□□ 0.84
EPHB4-207ENST00000489808 DDX23Q9BUQ8 820 aaKnown RBP20.3■□□□□ 0.84
EPHB4-207ENST00000489808 SMG9Q9H0W8 520 aaKnown RBP20.3■□□□□ 0.84
EPHB4-207ENST00000489808 FAM124BQ9H5Z6 455 aaPredicted RBP20.3■□□□□ 0.84
EPHB4-207ENST00000489808 CISHQ9NSE2 258 aa20.3■□□□□ 0.84
EPHB4-207ENST00000489808 FAM49BQ9NUQ9 324 aa20.3■□□□□ 0.84
EPHB4-207ENST00000489808 CHADO15335 359 aa20.29■□□□□ 0.84
EPHB4-207ENST00000489808 P4HA2O15460 535 aa20.29■□□□□ 0.84
EPHB4-207ENST00000489808 BPIFB1Q8TDL5 484 aa20.29■□□□□ 0.84
EPHB4-207ENST00000489808 USP13Q92995 863 aaPredicted RBP20.29■□□□□ 0.84
EPHB4-207ENST00000489808 CYP2S1Q96SQ9 504 aa20.29■□□□□ 0.84
EPHB4-207ENST00000489808 PRRX2Q99811 253 aa20.29■□□□□ 0.84
EPHB4-207ENST00000489808 SMOQ99835 787 aa20.29■□□□□ 0.84
EPHB4-207ENST00000489808 DNAI2Q9GZS0 605 aa20.29■□□□□ 0.84
EPHB4-207ENST00000489808 CSNK1G1Q9HCP0 422 aa20.29■□□□□ 0.84
EPHB4-207ENST00000489808 DMAP1Q9NPF5 467 aaPredicted RBP20.29■□□□□ 0.84
EPHB4-207ENST00000489808 TDP1Q9NUW8 608 aa20.29■□□□□ 0.84
EPHB4-207ENST00000489808 TRPM5Q9NZQ8 1165 aa20.29■□□□□ 0.84
EPHB4-207ENST00000489808 ZNF840PA6NDX5 716 aa20.28■□□□□ 0.84
EPHB4-207ENST00000489808 ARNTLO00327 626 aa20.28■□□□□ 0.84
EPHB4-207ENST00000489808 TNFRSF10BO14763 440 aa20.28■□□□□ 0.84
EPHB4-207ENST00000489808 BEST1O76090 585 aa20.28■□□□□ 0.84
EPHB4-207ENST00000489808 RTN3O95197 1032 aaPredicted RBP20.28■□□□□ 0.84
EPHB4-207ENST00000489808 CCDC192P0DO97 292 aa20.28■□□□□ 0.84
EPHB4-207ENST00000489808 RFX1P22670 979 aa20.28■□□□□ 0.84
EPHB4-207ENST00000489808 YWHAQP27348 245 aa20.28■□□□□ 0.84
EPHB4-207ENST00000489808 PPP3CCP48454 512 aa20.28■□□□□ 0.84
EPHB4-207ENST00000489808 CETN1Q12798 172 aa20.28■□□□□ 0.84
EPHB4-207ENST00000489808 KCNH2Q12809 1159 aa20.28■□□□□ 0.84
EPHB4-207ENST00000489808 TAF10Q12962 218 aa20.28■□□□□ 0.84
EPHB4-207ENST00000489808 CUL2Q13617 745 aa20.28■□□□□ 0.84
EPHB4-207ENST00000489808 ZNF394Q53GI3 561 aa20.28■□□□□ 0.84
EPHB4-207ENST00000489808 ZMIZ2Q8NF64 920 aa20.28■□□□□ 0.84
EPHB4-207ENST00000489808 GPT2Q8TD30 523 aa20.28■□□□□ 0.84
EPHB4-207ENST00000489808 HEXIM2Q96MH2 286 aaKnown RBP20.28■□□□□ 0.84
EPHB4-207ENST00000489808 ARID3AQ99856 593 aa20.28■□□□□ 0.84
EPHB4-207ENST00000489808 TRPC7Q9HCX4 862 aa20.28■□□□□ 0.84
EPHB4-207ENST00000489808 HEBP1Q9NRV9 189 aa20.28■□□□□ 0.84
EPHB4-207ENST00000489808 KRT82Q9NSB4 513 aa20.28■□□□□ 0.84
EPHB4-207ENST00000489808 COMMD8Q9NX08 183 aa20.28■□□□□ 0.84
EPHB4-207ENST00000489808 IL37Q9NZH6 218 aa20.28■□□□□ 0.84
EPHB4-207ENST00000489808 GCNT4Q9P109 453 aa20.28■□□□□ 0.84
EPHB4-207ENST00000489808 CCL26Q9Y258 94 aa20.28■□□□□ 0.84
EPHB4-207ENST00000489808 TRAV19A0A0A6YYK7 116 aa20.27■□□□□ 0.84
EPHB4-207ENST00000489808 KANSL1LA0AUZ9 987 aa20.27■□□□□ 0.84
EPHB4-207ENST00000489808 C2orf78A6NCI8 922 aa20.27■□□□□ 0.84
EPHB4-207ENST00000489808 GOLGA6L22H0YM25 854 aa20.27■□□□□ 0.84
EPHB4-207ENST00000489808 HDCP19113 662 aa20.27■□□□□ 0.84
EPHB4-207ENST00000489808 ADORA2BP29275 332 aa20.27■□□□□ 0.84
EPHB4-207ENST00000489808 MAP3K7CLP57077 242 aa20.27■□□□□ 0.84
EPHB4-207ENST00000489808 LRMPQ12912 555 aa20.27■□□□□ 0.84
EPHB4-207ENST00000489808 ZNF268Q14587 947 aaPredicted RBP20.27■□□□□ 0.84
EPHB4-207ENST00000489808 ARHGAP29Q52LW3 1261 aa20.27■□□□□ 0.84
EPHB4-207ENST00000489808 ARL14EPQ8N8R7 260 aaPredicted RBP20.27■□□□□ 0.84
EPHB4-207ENST00000489808 SCAMP5Q8TAC9 235 aa20.27■□□□□ 0.84
EPHB4-207ENST00000489808 LMO3Q8TAP4 145 aa20.27■□□□□ 0.84
EPHB4-207ENST00000489808 TMEM176AQ96HP8 235 aa20.27■□□□□ 0.84
EPHB4-207ENST00000489808 SLC22A12Q96S37 553 aa20.27■□□□□ 0.84
EPHB4-207ENST00000489808 THG1LQ9NWX6 298 aaKnown RBP20.27■□□□□ 0.84
EPHB4-207ENST00000489808 SIT1Q9Y3P8 196 aa20.27■□□□□ 0.84
EPHB4-207ENST00000489808 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.27■□□□□ 0.84
EPHB4-207ENST00000489808 AFPP02771 609 aaKnown RBP20.26■□□□□ 0.83
EPHB4-207ENST00000489808 USP17L7P0C7H9 530 aa20.26■□□□□ 0.83
EPHB4-207ENST00000489808 FAM200BP0CF97 657 aa20.26■□□□□ 0.83
EPHB4-207ENST00000489808 PFKLP17858 780 aa20.26■□□□□ 0.83
EPHB4-207ENST00000489808 SLC5A3P53794 718 aa20.26■□□□□ 0.83
EPHB4-207ENST00000489808 RAD23BP54727 409 aa20.26■□□□□ 0.83
EPHB4-207ENST00000489808 IRF2BP1Q8IU81 584 aa20.26■□□□□ 0.83
EPHB4-207ENST00000489808 SLC4A11Q8NBS3 891 aa20.26■□□□□ 0.83
EPHB4-207ENST00000489808 EHBP1Q8NDI1 1231 aa20.26■□□□□ 0.83
EPHB4-207ENST00000489808 PRSS33Q8NF86 280 aa20.26■□□□□ 0.83
EPHB4-207ENST00000489808 SLITRK1Q96PX8 696 aa20.26■□□□□ 0.83
EPHB4-207ENST00000489808 FOXQ1Q9C009 403 aa20.26■□□□□ 0.83
EPHB4-207ENST00000489808 KIF9Q9HAQ2 790 aa20.26■□□□□ 0.83
EPHB4-207ENST00000489808 CHORDC1Q9UHD1 332 aaPredicted RBP20.26■□□□□ 0.83
EPHB4-207ENST00000489808 SHISA7A6NL88 538 aa20.25■□□□□ 0.83
EPHB4-207ENST00000489808 GLULP15104 373 aa20.25■□□□□ 0.83
EPHB4-207ENST00000489808 CD72P21854 359 aa20.25■□□□□ 0.83
EPHB4-207ENST00000489808 TBXAS1P24557 533 aaPredicted RBP20.25■□□□□ 0.83
EPHB4-207ENST00000489808 ERCC5P28715 1186 aaPredicted RBP20.25■□□□□ 0.83
EPHB4-207ENST00000489808 MLLT6P55198 1093 aaPredicted RBP20.25■□□□□ 0.83
EPHB4-207ENST00000489808 PLCB2Q00722 1185 aa20.25■□□□□ 0.83
EPHB4-207ENST00000489808 IFRD2Q12894 506 aaPredicted RBP20.25■□□□□ 0.83
EPHB4-207ENST00000489808 DPCR1Q3MIW9 517 aa20.25■□□□□ 0.83
EPHB4-207ENST00000489808 PPP1R26Q5T8A7 1209 aaPredicted RBP20.25■□□□□ 0.83
EPHB4-207ENST00000489808 ZNF852Q6ZMS4 543 aa20.25■□□□□ 0.83
EPHB4-207ENST00000489808 TPRG1Q6ZUI0 275 aa20.25■□□□□ 0.83
EPHB4-207ENST00000489808 CREBRFQ8IUR6 639 aa20.25■□□□□ 0.83
EPHB4-207ENST00000489808 CSGALNACT1Q8TDX6 532 aa20.25■□□□□ 0.83
EPHB4-207ENST00000489808 OVCA2Q8WZ82 227 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms