RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 NUP93Q8N1F7 819 aa18.96■□□□□ 0.63
ABCF3-217ENST00000489719 CRYBG2Q8N1P7 616 aa18.96■□□□□ 0.63
ABCF3-217ENST00000489719 DHTKD1Q96HY7 919 aaPredicted RBP18.96■□□□□ 0.63
ABCF3-217ENST00000489719 LMAN1LQ9HAT1 526 aa18.96■□□□□ 0.63
ABCF3-217ENST00000489719 CYP3A43Q9HB55 503 aa18.96■□□□□ 0.63
ABCF3-217ENST00000489719 GTSE1Q9NYZ3 720 aa18.96■□□□□ 0.63
ABCF3-217ENST00000489719 CHMP5Q9NZZ3 219 aa18.96■□□□□ 0.63
ABCF3-217ENST00000489719 CCL26Q9Y258 94 aa18.96■□□□□ 0.63
ABCF3-217ENST00000489719 ABL1P00519 1130 aa18.95■□□□□ 0.62
ABCF3-217ENST00000489719 RPS9P46781 194 aaKnown RBP18.95■□□□□ 0.62
ABCF3-217ENST00000489719 USP46P62068 366 aa18.95■□□□□ 0.62
ABCF3-217ENST00000489719 LRRC63Q05C16 580 aa18.95■□□□□ 0.62
ABCF3-217ENST00000489719 ITPRIPL2Q3MIP1 535 aa18.95■□□□□ 0.62
ABCF3-217ENST00000489719 TCERG1LQ5VWI1 586 aa18.95■□□□□ 0.62
ABCF3-217ENST00000489719 RALGPS2Q86X27 583 aaPredicted RBP18.95■□□□□ 0.62
ABCF3-217ENST00000489719 ARL14EPQ8N8R7 260 aaPredicted RBP18.95■□□□□ 0.62
ABCF3-217ENST00000489719 TTC16Q8NEE8 873 aa18.95■□□□□ 0.62
ABCF3-217ENST00000489719 SLITRK1Q96PX8 696 aa18.95■□□□□ 0.62
ABCF3-217ENST00000489719 TTLL2Q9BWV7 592 aa18.95■□□□□ 0.62
ABCF3-217ENST00000489719 MAN1B1Q9UKM7 699 aa18.95■□□□□ 0.62
ABCF3-217ENST00000489719 SHISA7A6NL88 538 aa18.94■□□□□ 0.62
ABCF3-217ENST00000489719 SLC16A3O15427 465 aaKnown RBP18.94■□□□□ 0.62
ABCF3-217ENST00000489719 TADA3O75528 432 aa18.94■□□□□ 0.62
ABCF3-217ENST00000489719 RTN3O95197 1032 aaPredicted RBP18.94■□□□□ 0.62
ABCF3-217ENST00000489719 PFKLP17858 780 aa18.94■□□□□ 0.62
ABCF3-217ENST00000489719 YWHAQP27348 245 aa18.94■□□□□ 0.62
ABCF3-217ENST00000489719 NBL1P41271 181 aa18.94■□□□□ 0.62
ABCF3-217ENST00000489719 ASPAP45381 313 aa18.94■□□□□ 0.62
ABCF3-217ENST00000489719 CACNA2D1P54289 1103 aa18.94■□□□□ 0.62
ABCF3-217ENST00000489719 MCCD1P59942 119 aaPredicted RBP18.94■□□□□ 0.62
ABCF3-217ENST00000489719 TAF10Q12962 218 aa18.94■□□□□ 0.62
ABCF3-217ENST00000489719 WDR44Q5JSH3 913 aa18.94■□□□□ 0.62
ABCF3-217ENST00000489719 SMARCD1Q96GM5 515 aa18.94■□□□□ 0.62
ABCF3-217ENST00000489719 KCNK16Q96T55 309 aa18.94■□□□□ 0.62
ABCF3-217ENST00000489719 NIF3L1Q9GZT8 377 aa18.94■□□□□ 0.62
ABCF3-217ENST00000489719 APOBEC3GQ9HC16 384 aaKnown RBP18.94■□□□□ 0.62
ABCF3-217ENST00000489719 RAB20Q9NX57 234 aa18.94■□□□□ 0.62
ABCF3-217ENST00000489719 KMT2EQ8IZD2 1858 aa18.94■□□□□ 0.62
ABCF3-217ENST00000489719 C2orf78A6NCI8 922 aa18.93■□□□□ 0.62
ABCF3-217ENST00000489719 ZNF840PA6NDX5 716 aa18.93■□□□□ 0.62
ABCF3-217ENST00000489719 PROB1E7EW31 1015 aa18.93■□□□□ 0.62
ABCF3-217ENST00000489719 SPECC1L-ADORA2AF8WAN1 911 aa18.93■□□□□ 0.62
ABCF3-217ENST00000489719 AP1G2O75843 785 aa18.93■□□□□ 0.62
ABCF3-217ENST00000489719 SOX9P48436 509 aa18.93■□□□□ 0.62
ABCF3-217ENST00000489719 MXI1P50539 228 aa18.93■□□□□ 0.62
ABCF3-217ENST00000489719 AMPD2Q01433 879 aa18.93■□□□□ 0.62
ABCF3-217ENST00000489719 TNK2Q07912 1038 aa18.93■□□□□ 0.62
ABCF3-217ENST00000489719 IFRD2Q12894 506 aaPredicted RBP18.93■□□□□ 0.62
ABCF3-217ENST00000489719 ORC1Q13415 861 aa18.93■□□□□ 0.62
ABCF3-217ENST00000489719 FZD5Q13467 585 aa18.93■□□□□ 0.62
ABCF3-217ENST00000489719 RUNX3Q13761 415 aa18.93■□□□□ 0.62
ABCF3-217ENST00000489719 DCAF17Q5H9S7 520 aaPredicted RBP18.93■□□□□ 0.62
ABCF3-217ENST00000489719 PAQR9Q6ZVX9 377 aa18.93■□□□□ 0.62
ABCF3-217ENST00000489719 FRMD5Q7Z6J6 570 aa18.93■□□□□ 0.62
ABCF3-217ENST00000489719 FAM35AQ86V20 835 aa18.93■□□□□ 0.62
ABCF3-217ENST00000489719 FBXL13Q8NEE6 735 aa18.93■□□□□ 0.62
ABCF3-217ENST00000489719 SLC22A12Q96S37 553 aa18.93■□□□□ 0.62
ABCF3-217ENST00000489719 FAM83CQ9BQN1 747 aa18.93■□□□□ 0.62
ABCF3-217ENST00000489719 NT5C1AQ9BXI3 368 aa18.93■□□□□ 0.62
ABCF3-217ENST00000489719 DMAP1Q9NPF5 467 aaPredicted RBP18.93■□□□□ 0.62
ABCF3-217ENST00000489719 GCNT4Q9P109 453 aa18.93■□□□□ 0.62
ABCF3-217ENST00000489719 ARMCX3Q9UH62 379 aaPredicted RBP18.93■□□□□ 0.62
ABCF3-217ENST00000489719 SP9P0CG40 484 aa18.92■□□□□ 0.62
ABCF3-217ENST00000489719 CD58P19256 250 aa18.92■□□□□ 0.62
ABCF3-217ENST00000489719 ANP32AP39687 249 aaKnown RBP18.92■□□□□ 0.62
ABCF3-217ENST00000489719 PMS1P54277 932 aaKnown RBP18.92■□□□□ 0.62
ABCF3-217ENST00000489719 CSTF1Q05048 431 aaKnown RBP18.92■□□□□ 0.62
ABCF3-217ENST00000489719 LRRC32Q14392 662 aa18.92■□□□□ 0.62
ABCF3-217ENST00000489719 PDGFRLQ15198 375 aa18.92■□□□□ 0.62
ABCF3-217ENST00000489719 KLHL10Q6JEL2 608 aa18.92■□□□□ 0.62
ABCF3-217ENST00000489719 FUKQ8N0W3 1084 aa18.92■□□□□ 0.62
ABCF3-217ENST00000489719 TTC39CQ8N584 583 aa18.92■□□□□ 0.62
ABCF3-217ENST00000489719 C12orf29Q8N999 325 aa18.92■□□□□ 0.62
ABCF3-217ENST00000489719 SLC2A14Q8TDB8 520 aa18.92■□□□□ 0.62
ABCF3-217ENST00000489719 NKD2Q969F2 451 aaPredicted RBP18.92■□□□□ 0.62
ABCF3-217ENST00000489719 FAXDC2Q96IV6 333 aa18.92■□□□□ 0.62
ABCF3-217ENST00000489719 EBF3Q9H4W6 596 aa18.92■□□□□ 0.62
ABCF3-217ENST00000489719 METTL14Q9HCE5 456 aaKnown RBP18.92■□□□□ 0.62
ABCF3-217ENST00000489719 TMEM30AQ9NV96 361 aa18.92■□□□□ 0.62
ABCF3-217ENST00000489719 COMMD8Q9NX08 183 aa18.92■□□□□ 0.62
ABCF3-217ENST00000489719 DUS2Q9NX74 493 aaKnown RBP18.92■□□□□ 0.62
ABCF3-217ENST00000489719 CHORDC1Q9UHD1 332 aaPredicted RBP18.92■□□□□ 0.62
ABCF3-217ENST00000489719 FBXO4Q9UKT5 387 aa18.92■□□□□ 0.62
ABCF3-217ENST00000489719 TRIM49BA6NDI0 452 aa18.91■□□□□ 0.62
ABCF3-217ENST00000489719 GFRA3O60609 400 aa18.91■□□□□ 0.62
ABCF3-217ENST00000489719 CHRNB1P11230 501 aa18.91■□□□□ 0.62
ABCF3-217ENST00000489719 CCDC130P13994 396 aa18.91■□□□□ 0.62
ABCF3-217ENST00000489719 CTHP32929 405 aa18.91■□□□□ 0.62
ABCF3-217ENST00000489719 UBE2HP62256 183 aa18.91■□□□□ 0.62
ABCF3-217ENST00000489719 INCA1Q0VD86 236 aa18.91■□□□□ 0.62
ABCF3-217ENST00000489719 MTF1Q14872 753 aa18.91■□□□□ 0.62
ABCF3-217ENST00000489719 ZC3H14Q6PJT7 736 aaKnown RBP18.91■□□□□ 0.62
ABCF3-217ENST00000489719 FILIP1Q7Z7B0 1213 aa18.91■□□□□ 0.62
ABCF3-217ENST00000489719 ZC3H3Q8IXZ2 948 aaKnown RBP18.91■□□□□ 0.62
ABCF3-217ENST00000489719 ZNF687Q8N1G0 1237 aa18.91■□□□□ 0.62
ABCF3-217ENST00000489719 PDZD8Q8NEN9 1154 aa18.91■□□□□ 0.62
ABCF3-217ENST00000489719 SH3RF2Q8TEC5 729 aa18.91■□□□□ 0.62
ABCF3-217ENST00000489719 SEMA4DQ92854 862 aa18.91■□□□□ 0.62
ABCF3-217ENST00000489719 FBXO32Q969P5 355 aa18.91■□□□□ 0.62
ABCF3-217ENST00000489719 CYFIP2Q96F07 1278 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms