RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 PRKCSHP14314 528 aaPredicted RBP18.39■□□□□ 0.53
MDC1-206ENST00000489540 YWHAQP27348 245 aa18.39■□□□□ 0.53
MDC1-206ENST00000489540 ADORA2BP29275 332 aa18.39■□□□□ 0.53
MDC1-206ENST00000489540 AVPR1AP37288 418 aa18.39■□□□□ 0.53
MDC1-206ENST00000489540 RAD23BP54727 409 aa18.39■□□□□ 0.53
MDC1-206ENST00000489540 USP46P62068 366 aa18.39■□□□□ 0.53
MDC1-206ENST00000489540 TXNDC8Q6A555 127 aa18.39■□□□□ 0.53
MDC1-206ENST00000489540 MAB21L3Q8N8X9 362 aa18.39■□□□□ 0.53
MDC1-206ENST00000489540 SLC4A11Q8NBS3 891 aa18.39■□□□□ 0.53
MDC1-206ENST00000489540 SMOQ99835 787 aa18.39■□□□□ 0.53
MDC1-206ENST00000489540 TRPM5Q9NZQ8 1165 aa18.39■□□□□ 0.53
MDC1-206ENST00000489540 HEPACAM2A8MVW5 462 aa18.38■□□□□ 0.53
MDC1-206ENST00000489540 TADA3O75528 432 aa18.38■□□□□ 0.53
MDC1-206ENST00000489540 PFKLP17858 780 aa18.38■□□□□ 0.53
MDC1-206ENST00000489540 GCNT1Q02742 428 aa18.38■□□□□ 0.53
MDC1-206ENST00000489540 MAN2A1Q16706 1144 aa18.38■□□□□ 0.53
MDC1-206ENST00000489540 VITQ6UXI7 678 aa18.38■□□□□ 0.53
MDC1-206ENST00000489540 SUGP1Q8IWZ8 645 aaKnown RBP18.38■□□□□ 0.53
MDC1-206ENST00000489540 PPM1KQ8N3J5 372 aa18.38■□□□□ 0.53
MDC1-206ENST00000489540 CELF5Q8N6W0 485 aaKnown RBP18.38■□□□□ 0.53
MDC1-206ENST00000489540 SLITRK1Q96PX8 696 aa18.38■□□□□ 0.53
MDC1-206ENST00000489540 INTS2Q9H0H0 1204 aaKnown RBP18.38■□□□□ 0.53
MDC1-206ENST00000489540 IL37Q9NZH6 218 aa18.38■□□□□ 0.53
MDC1-206ENST00000489540 KIAA1257Q9ULG3 409 aa18.38■□□□□ 0.53
MDC1-206ENST00000489540 GTPBP10A4D1E9 387 aaKnown RBP18.37■□□□□ 0.53
MDC1-206ENST00000489540 TNFRSF10BO14763 440 aa18.37■□□□□ 0.53
MDC1-206ENST00000489540 PDE6CP51160 858 aa18.37■□□□□ 0.53
MDC1-206ENST00000489540 MAP3K7CLP57077 242 aa18.37■□□□□ 0.53
MDC1-206ENST00000489540 TAF10Q12962 218 aa18.37■□□□□ 0.53
MDC1-206ENST00000489540 GRM2Q14416 872 aa18.37■□□□□ 0.53
MDC1-206ENST00000489540 STX1AQ16623 288 aa18.37■□□□□ 0.53
MDC1-206ENST00000489540 PPP1R26Q5T8A7 1209 aaPredicted RBP18.37■□□□□ 0.53
MDC1-206ENST00000489540 ARHGAP17Q68EM7 881 aa18.37■□□□□ 0.53
MDC1-206ENST00000489540 GBP6Q6ZN66 633 aa18.37■□□□□ 0.53
MDC1-206ENST00000489540 YAF2Q8IY57 180 aa18.37■□□□□ 0.53
MDC1-206ENST00000489540 SIX5Q8N196 739 aa18.37■□□□□ 0.53
MDC1-206ENST00000489540 FBXL6Q8N531 539 aa18.37■□□□□ 0.53
MDC1-206ENST00000489540 UBR7Q8N806 425 aa18.37■□□□□ 0.53
MDC1-206ENST00000489540 PDZD8Q8NEN9 1154 aa18.37■□□□□ 0.53
MDC1-206ENST00000489540 ZMIZ2Q8NF64 920 aa18.37■□□□□ 0.53
MDC1-206ENST00000489540 OVCA2Q8WZ82 227 aa18.37■□□□□ 0.53
MDC1-206ENST00000489540 IRF7Q92985 503 aa18.37■□□□□ 0.53
MDC1-206ENST00000489540 JAKMIP2Q96AA8 810 aa18.37■□□□□ 0.53
MDC1-206ENST00000489540 FAM81BQ96LP2 452 aa18.37■□□□□ 0.53
MDC1-206ENST00000489540 DUSP16Q9BY84 665 aa18.37■□□□□ 0.53
MDC1-206ENST00000489540 MFSD1Q9H3U5 465 aa18.37■□□□□ 0.53
MDC1-206ENST00000489540 PNPLA8Q9NP80 782 aa18.37■□□□□ 0.53
MDC1-206ENST00000489540 TMEM63CQ9P1W3 806 aa18.37■□□□□ 0.53
MDC1-206ENST00000489540 TECTAO75443 2155 aa18.37■□□□□ 0.53
MDC1-206ENST00000489540 TRAV19A0A0A6YYK7 116 aa18.36■□□□□ 0.53
MDC1-206ENST00000489540 ZNF840PA6NDX5 716 aa18.36■□□□□ 0.53
MDC1-206ENST00000489540 ZNF263O14978 683 aa18.36■□□□□ 0.53
MDC1-206ENST00000489540 BEST1O76090 585 aa18.36■□□□□ 0.53
MDC1-206ENST00000489540 NPR3P17342 541 aa18.36■□□□□ 0.53
MDC1-206ENST00000489540 PTMSP20962 102 aa18.36■□□□□ 0.53
MDC1-206ENST00000489540 SLC5A3P53794 718 aa18.36■□□□□ 0.53
MDC1-206ENST00000489540 SLC44A4Q53GD3 710 aa18.36■□□□□ 0.53
MDC1-206ENST00000489540 CLEC20AQ6ZU45 233 aa18.36■□□□□ 0.53
MDC1-206ENST00000489540 RRAGAQ7L523 313 aa18.36■□□□□ 0.53
MDC1-206ENST00000489540 GPIHBP1Q8IV16 184 aa18.36■□□□□ 0.53
MDC1-206ENST00000489540 DNASE1L2Q92874 299 aa18.36■□□□□ 0.53
MDC1-206ENST00000489540 SHDQ96IW2 340 aa18.36■□□□□ 0.53
MDC1-206ENST00000489540 TUBGCP2Q9BSJ2 902 aa18.36■□□□□ 0.53
MDC1-206ENST00000489540 UBXN6Q9BZV1 441 aa18.36■□□□□ 0.53
MDC1-206ENST00000489540 FBXO44Q9H4M3 255 aa18.36■□□□□ 0.53
MDC1-206ENST00000489540 BRD9Q9H8M2 597 aa18.36■□□□□ 0.53
MDC1-206ENST00000489540 TRPC7Q9HCX4 862 aa18.36■□□□□ 0.53
MDC1-206ENST00000489540 TRPV5Q9NQA5 729 aa18.36■□□□□ 0.53
MDC1-206ENST00000489540 TDP1Q9NUW8 608 aa18.36■□□□□ 0.53
MDC1-206ENST00000489540 THG1LQ9NWX6 298 aaKnown RBP18.36■□□□□ 0.53
MDC1-206ENST00000489540 GCNT4Q9P109 453 aa18.36■□□□□ 0.53
MDC1-206ENST00000489540 CA14Q9ULX7 337 aa18.36■□□□□ 0.53
MDC1-206ENST00000489540 NFE2L3Q9Y4A8 694 aa18.36■□□□□ 0.53
MDC1-206ENST00000489540 PCDHB4Q9Y5E5 795 aa18.36■□□□□ 0.53
MDC1-206ENST00000489540 KCNJ18B7U540 433 aa18.35■□□□□ 0.53
MDC1-206ENST00000489540 PAEPP09466 180 aa18.35■□□□□ 0.53
MDC1-206ENST00000489540 USP17L7P0C7H9 530 aa18.35■□□□□ 0.53
MDC1-206ENST00000489540 VDRP11473 427 aa18.35■□□□□ 0.53
MDC1-206ENST00000489540 EEF1GP26641 437 aaKnown RBP18.35■□□□□ 0.53
MDC1-206ENST00000489540 GDI1P31150 447 aa18.35■□□□□ 0.53
MDC1-206ENST00000489540 SLC8A3P57103 927 aa18.35■□□□□ 0.53
MDC1-206ENST00000489540 FCHO2Q0JRZ9 810 aa18.35■□□□□ 0.53
MDC1-206ENST00000489540 KCNJ12Q14500 433 aa18.35■□□□□ 0.53
MDC1-206ENST00000489540 ZNF268Q14587 947 aaPredicted RBP18.35■□□□□ 0.53
MDC1-206ENST00000489540 EXOC3L4Q17RC7 722 aa18.35■□□□□ 0.53
MDC1-206ENST00000489540 VWA3BQ502W6 1294 aa18.35■□□□□ 0.53
MDC1-206ENST00000489540 SGO2Q562F6 1265 aa18.35■□□□□ 0.53
MDC1-206ENST00000489540 PHLDB3Q6NSJ2 640 aa18.35■□□□□ 0.53
MDC1-206ENST00000489540 TMEM270Q6UE05 265 aa18.35■□□□□ 0.53
MDC1-206ENST00000489540 ENOSF1Q7L5Y1 443 aa18.35■□□□□ 0.53
MDC1-206ENST00000489540 ANKRD52Q8NB46 1076 aa18.35■□□□□ 0.53
MDC1-206ENST00000489540 SCAMP5Q8TAC9 235 aa18.35■□□□□ 0.53
MDC1-206ENST00000489540 BPIFB1Q8TDL5 484 aa18.35■□□□□ 0.53
MDC1-206ENST00000489540 FBXO32Q969P5 355 aa18.35■□□□□ 0.53
MDC1-206ENST00000489540 RSPRY1Q96DX4 576 aa18.35■□□□□ 0.53
MDC1-206ENST00000489540 CRACR2AQ9BSW2 395 aa18.35■□□□□ 0.53
MDC1-206ENST00000489540 NDST4Q9H3R1 872 aa18.35■□□□□ 0.53
MDC1-206ENST00000489540 KIF9Q9HAQ2 790 aa18.35■□□□□ 0.53
MDC1-206ENST00000489540 ARHGEF3Q9NR81 526 aa18.35■□□□□ 0.53
MDC1-206ENST00000489540 SAMSN1Q9NSI8 373 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms