RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 ENGASEQ8NFI3 743 aa16.27■□□□□ 0.2
UFD1-209ENST00000489406 SLC6A17Q9H1V8 727 aa16.27■□□□□ 0.2
UFD1-209ENST00000489406 TTC12Q9H892 705 aaPredicted RBP16.27■□□□□ 0.2
UFD1-209ENST00000489406 SRPK3Q9UPE1 567 aa16.27■□□□□ 0.2
UFD1-209ENST00000489406 CREBBPQ92793 2442 aa16.26■□□□□ 0.19
UFD1-209ENST00000489406 A0A1B0GVT2 93 aa16.26■□□□□ 0.19
UFD1-209ENST00000489406 A0A1W2PQF6 199 aa16.26■□□□□ 0.19
UFD1-209ENST00000489406 TRIM66O15016 1216 aa16.26■□□□□ 0.19
UFD1-209ENST00000489406 BCAT2O15382 392 aaPredicted RBP16.26■□□□□ 0.19
UFD1-209ENST00000489406 CSH1P0DML2 217 aa16.26■□□□□ 0.19
UFD1-209ENST00000489406 CSH2P0DML3 217 aa16.26■□□□□ 0.19
UFD1-209ENST00000489406 MCF2P10911 925 aa16.26■□□□□ 0.19
UFD1-209ENST00000489406 ODC1P11926 461 aa16.26■□□□□ 0.19
UFD1-209ENST00000489406 LRPAP1P30533 357 aa16.26■□□□□ 0.19
UFD1-209ENST00000489406 TNFSF9P41273 254 aa16.26■□□□□ 0.19
UFD1-209ENST00000489406 SF3A1Q15459 793 aaKnown RBP16.26■□□□□ 0.19
UFD1-209ENST00000489406 BROXQ5VW32 411 aa16.26■□□□□ 0.19
UFD1-209ENST00000489406 FILIP1Q7Z7B0 1213 aa16.26■□□□□ 0.19
UFD1-209ENST00000489406 LRRTM3Q86VH5 581 aa16.26■□□□□ 0.19
UFD1-209ENST00000489406 ADGRG2Q8IZP9 1017 aa16.26■□□□□ 0.19
UFD1-209ENST00000489406 SPPL2BQ8TCT7 592 aa16.26■□□□□ 0.19
UFD1-209ENST00000489406 SENP8Q96LD8 212 aa16.26■□□□□ 0.19
UFD1-209ENST00000489406 TARS2Q9BW92 718 aaKnown RBP16.26■□□□□ 0.19
UFD1-209ENST00000489406 GCNT4Q9P109 453 aa16.26■□□□□ 0.19
UFD1-209ENST00000489406 FTSJ1Q9UET6 329 aa16.26■□□□□ 0.19
UFD1-209ENST00000489406 KNL1Q8NG31 2342 aa16.26■□□□□ 0.19
UFD1-209ENST00000489406 DOPEY1Q5JWR5 2465 aa16.26■□□□□ 0.19
UFD1-209ENST00000489406 C2orf78A6NCI8 922 aa16.25■□□□□ 0.19
UFD1-209ENST00000489406 TBC1D3BA6NDS4 549 aa16.25■□□□□ 0.19
UFD1-209ENST00000489406 ENO4A6NNW6 628 aa16.25■□□□□ 0.19
UFD1-209ENST00000489406 TERTO14746 1132 aaKnown RBP16.25■□□□□ 0.19
UFD1-209ENST00000489406 SCAMP3O14828 347 aaKnown RBP16.25■□□□□ 0.19
UFD1-209ENST00000489406 NCAM1P13591 858 aa16.25■□□□□ 0.19
UFD1-209ENST00000489406 IFNAR1P17181 557 aa16.25■□□□□ 0.19
UFD1-209ENST00000489406 EIF2DP41214 584 aaKnown RBP16.25■□□□□ 0.19
UFD1-209ENST00000489406 GUCY2FP51841 1108 aa16.25■□□□□ 0.19
UFD1-209ENST00000489406 NFATC3Q12968 1075 aa16.25■□□□□ 0.19
UFD1-209ENST00000489406 TBC1D25Q3MII6 688 aa16.25■□□□□ 0.19
UFD1-209ENST00000489406 ADCK5Q3MIX3 580 aa16.25■□□□□ 0.19
UFD1-209ENST00000489406 C4orf17Q53FE4 359 aa16.25■□□□□ 0.19
UFD1-209ENST00000489406 TRMT11Q7Z4G4 463 aaKnown RBP16.25■□□□□ 0.19
UFD1-209ENST00000489406 OXER1Q8TDS5 423 aa16.25■□□□□ 0.19
UFD1-209ENST00000489406 C2orf15Q8WU43 125 aaKnown RBP16.25■□□□□ 0.19
UFD1-209ENST00000489406 IFT74Q96LB3 600 aa16.25■□□□□ 0.19
UFD1-209ENST00000489406 PCDHA12Q9UN75 941 aa16.25■□□□□ 0.19
UFD1-209ENST00000489406 AHCTF1Q8WYP5 2266 aa16.25■□□□□ 0.19
UFD1-209ENST00000489406 LRRK2Q5S007 2527 aa16.24■□□□□ 0.19
UFD1-209ENST00000489406 KCNK3O14649 394 aa16.24■□□□□ 0.19
UFD1-209ENST00000489406 PPEF2O14830 753 aa16.24■□□□□ 0.19
UFD1-209ENST00000489406 TCF3P15923 654 aa16.24■□□□□ 0.19
UFD1-209ENST00000489406 CYP11B2P19099 503 aa16.24■□□□□ 0.19
UFD1-209ENST00000489406 HDCP19113 662 aa16.24■□□□□ 0.19
UFD1-209ENST00000489406 CD6P30203 668 aa16.24■□□□□ 0.19
UFD1-209ENST00000489406 NTSR1P30989 418 aa16.24■□□□□ 0.19
UFD1-209ENST00000489406 UCNP55089 124 aa16.24■□□□□ 0.19
UFD1-209ENST00000489406 ZXDBP98169 803 aa16.24■□□□□ 0.19
UFD1-209ENST00000489406 ATP2C1P98194 919 aaPredicted RBP16.24■□□□□ 0.19
UFD1-209ENST00000489406 KCNB1Q14721 858 aa16.24■□□□□ 0.19
UFD1-209ENST00000489406 C6orf132Q5T0Z8 1188 aa16.24■□□□□ 0.19
UFD1-209ENST00000489406 HES3Q5TGS1 186 aa16.24■□□□□ 0.19
UFD1-209ENST00000489406 PADI6Q6TGC4 694 aa16.24■□□□□ 0.19
UFD1-209ENST00000489406 MIB1Q86YT6 1006 aa16.24■□□□□ 0.19
UFD1-209ENST00000489406 ZNF248Q8NDW4 579 aa16.24■□□□□ 0.19
UFD1-209ENST00000489406 IPO4Q8TEX9 1081 aaKnown RBP16.24■□□□□ 0.19
UFD1-209ENST00000489406 ZFRQ96KR1 1074 aaKnown RBP16.24■□□□□ 0.19
UFD1-209ENST00000489406 GPR174Q9BXC1 333 aa16.24■□□□□ 0.19
UFD1-209ENST00000489406 UXTQ9UBK9 157 aaPredicted RBP16.24■□□□□ 0.19
UFD1-209ENST00000489406 ARHGAP26Q9UNA1 814 aa16.24■□□□□ 0.19
UFD1-209ENST00000489406 NFE2L3Q9Y4A8 694 aa16.24■□□□□ 0.19
UFD1-209ENST00000489406 PAXBP1Q9Y5B6 917 aa16.24■□□□□ 0.19
UFD1-209ENST00000489406 SNX11Q9Y5W9 270 aa16.24■□□□□ 0.19
UFD1-209ENST00000489406 NBPF19A0A087WUL8 3843 aa16.23■□□□□ 0.19
UFD1-209ENST00000489406 PRPF40AO75400 957 aaKnown RBP16.23■□□□□ 0.19
UFD1-209ENST00000489406 CSNK1EP49674 416 aaKnown RBP16.23■□□□□ 0.19
UFD1-209ENST00000489406 KIF19Q2TAC6 998 aa16.23■□□□□ 0.19
UFD1-209ENST00000489406 DCAF12L1Q5VU92 463 aa16.23■□□□□ 0.19
UFD1-209ENST00000489406 RHBDF2Q6PJF5 856 aa16.23■□□□□ 0.19
UFD1-209ENST00000489406 KIAA1324Q6UXG2 1013 aaKnown RBP16.23■□□□□ 0.19
UFD1-209ENST00000489406 PHTF2Q8N3S3 785 aa16.23■□□□□ 0.19
UFD1-209ENST00000489406 BRF1Q92994 677 aa16.23■□□□□ 0.19
UFD1-209ENST00000489406 TOE1Q96GM8 510 aaKnown RBP16.23■□□□□ 0.19
UFD1-209ENST00000489406 ZBTB45Q96K62 511 aaPredicted RBP16.23■□□□□ 0.19
UFD1-209ENST00000489406 MRPL4Q9BYD3 311 aaKnown RBP16.23■□□□□ 0.19
UFD1-209ENST00000489406 EIF2B4Q9UI10 523 aaKnown RBP16.23■□□□□ 0.19
UFD1-209ENST00000489406 HCN2Q9UL51 889 aa16.23■□□□□ 0.19
UFD1-209ENST00000489406 PCDHGA1Q9Y5H4 931 aa16.23■□□□□ 0.19
UFD1-209ENST00000489406 ANK1P16157 1881 aa16.22■□□□□ 0.19
UFD1-209ENST00000489406 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.22■□□□□ 0.19
UFD1-209ENST00000489406 LEFTY2O00292 366 aa16.22■□□□□ 0.19
UFD1-209ENST00000489406 ABLIM1O14639 778 aa16.22■□□□□ 0.19
UFD1-209ENST00000489406 MYF5P13349 255 aa16.22■□□□□ 0.19
UFD1-209ENST00000489406 PROZP22891 400 aa16.22■□□□□ 0.19
UFD1-209ENST00000489406 LILRA4P59901 499 aa16.22■□□□□ 0.19
UFD1-209ENST00000489406 UBAP2LQ14157 1087 aaKnown RBP16.22■□□□□ 0.19
UFD1-209ENST00000489406 ZBTB6Q15916 424 aa16.22■□□□□ 0.19
UFD1-209ENST00000489406 DDR2Q16832 855 aa16.22■□□□□ 0.19
UFD1-209ENST00000489406 RNF20Q5VTR2 975 aa16.22■□□□□ 0.19
UFD1-209ENST00000489406 MPZL3Q6UWV2 235 aa16.22■□□□□ 0.19
UFD1-209ENST00000489406 Q6ZUG5 572 aa16.22■□□□□ 0.19
UFD1-209ENST00000489406 KCNV2Q8TDN2 545 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms