RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 ACOT1Q86TX2 421 aa26.59■■□□□ 1.85
HMGN1-217ENST00000489072 ELOA2Q8IYF1 753 aaPredicted RBP26.59■■□□□ 1.85
HMGN1-217ENST00000489072 MAML2Q8IZL2 1156 aaPredicted RBP26.59■■□□□ 1.85
HMGN1-217ENST00000489072 ADSSL1Q8N142 457 aa26.59■■□□□ 1.85
HMGN1-217ENST00000489072 HOOK1Q9UJC3 728 aaKnown RBP26.59■■□□□ 1.85
HMGN1-217ENST00000489072 FANCMQ8IYD8 2048 aa26.59■■□□□ 1.85
HMGN1-217ENST00000489072 C2orf78A6NCI8 922 aa26.58■■□□□ 1.85
HMGN1-217ENST00000489072 CETN3O15182 167 aa26.58■■□□□ 1.85
HMGN1-217ENST00000489072 MAGEA9P43362 315 aa26.58■■□□□ 1.85
HMGN1-217ENST00000489072 RPS9P46781 194 aaKnown RBP26.58■■□□□ 1.85
HMGN1-217ENST00000489072 NDST1P52848 882 aa26.58■■□□□ 1.85
HMGN1-217ENST00000489072 NOP14P78316 857 aaKnown RBP26.58■■□□□ 1.85
HMGN1-217ENST00000489072 PLCB2Q00722 1185 aa26.58■■□□□ 1.85
HMGN1-217ENST00000489072 ZNF268Q14587 947 aaPredicted RBP26.58■■□□□ 1.85
HMGN1-217ENST00000489072 ANKRD40Q6AI12 368 aa26.58■■□□□ 1.85
HMGN1-217ENST00000489072 ISM2Q6H9L7 571 aa26.58■■□□□ 1.85
HMGN1-217ENST00000489072 FAM35AQ86V20 835 aa26.58■■□□□ 1.85
HMGN1-217ENST00000489072 ZC3H3Q8IXZ2 948 aaKnown RBP26.58■■□□□ 1.85
HMGN1-217ENST00000489072 TNIP3Q96KP6 325 aa26.58■■□□□ 1.85
HMGN1-217ENST00000489072 KIF9Q9HAQ2 790 aa26.58■■□□□ 1.85
HMGN1-217ENST00000489072 TMEM8AQ9HCN3 771 aa26.58■■□□□ 1.85
HMGN1-217ENST00000489072 SPATA6Q9NWH7 488 aaPredicted RBP26.58■■□□□ 1.85
HMGN1-217ENST00000489072 GCNT4Q9P109 453 aa26.58■■□□□ 1.85
HMGN1-217ENST00000489072 TRIM49BA6NDI0 452 aa26.57■■□□□ 1.84
HMGN1-217ENST00000489072 NCAM2O15394 837 aa26.57■■□□□ 1.84
HMGN1-217ENST00000489072 KPNA1P52294 538 aaPredicted RBP26.57■■□□□ 1.84
HMGN1-217ENST00000489072 TXNDC11Q6PKC3 985 aa26.57■■□□□ 1.84
HMGN1-217ENST00000489072 FAM83CQ9BQN1 747 aa26.57■■□□□ 1.84
HMGN1-217ENST00000489072 C8orf33Q9H7E9 229 aaPredicted RBP26.57■■□□□ 1.84
HMGN1-217ENST00000489072 GKN1Q9NS71 199 aa26.57■■□□□ 1.84
HMGN1-217ENST00000489072 THG1LQ9NWX6 298 aaKnown RBP26.57■■□□□ 1.84
HMGN1-217ENST00000489072 MAN1B1Q9UKM7 699 aa26.57■■□□□ 1.84
HMGN1-217ENST00000489072 TRAV19A0A0A6YYK7 116 aa26.56■■□□□ 1.84
HMGN1-217ENST00000489072 KINO60870 393 aaKnown RBP26.56■■□□□ 1.84
HMGN1-217ENST00000489072 SP9P0CG40 484 aa26.56■■□□□ 1.84
HMGN1-217ENST00000489072 EPB41P11171 864 aaKnown RBP26.56■■□□□ 1.84
HMGN1-217ENST00000489072 GTF2H1P32780 548 aa26.56■■□□□ 1.84
HMGN1-217ENST00000489072 FUKQ8N0W3 1084 aa26.56■■□□□ 1.84
HMGN1-217ENST00000489072 CRYBG2Q8N1P7 616 aa26.56■■□□□ 1.84
HMGN1-217ENST00000489072 ARL14EPQ8N8R7 260 aaPredicted RBP26.56■■□□□ 1.84
HMGN1-217ENST00000489072 SEMA4DQ92854 862 aa26.56■■□□□ 1.84
HMGN1-217ENST00000489072 KCNK16Q96T55 309 aa26.56■■□□□ 1.84
HMGN1-217ENST00000489072 TSG101Q99816 390 aa26.56■■□□□ 1.84
HMGN1-217ENST00000489072 MED10Q9BTT4 135 aa26.56■■□□□ 1.84
HMGN1-217ENST00000489072 IMPG2Q9BZV3 1241 aa26.56■■□□□ 1.84
HMGN1-217ENST00000489072 FAM186AA6NE01 2351 aa26.55■■□□□ 1.84
HMGN1-217ENST00000489072 SPECC1L-ADORA2AF8WAN1 911 aa26.55■■□□□ 1.84
HMGN1-217ENST00000489072 CKMP06732 381 aa26.55■■□□□ 1.84
HMGN1-217ENST00000489072 USP17L7P0C7H9 530 aa26.55■■□□□ 1.84
HMGN1-217ENST00000489072 CCDC130P13994 396 aa26.55■■□□□ 1.84
HMGN1-217ENST00000489072 CD44P16070 742 aaKnown RBP26.55■■□□□ 1.84
HMGN1-217ENST00000489072 CTHP32929 405 aa26.55■■□□□ 1.84
HMGN1-217ENST00000489072 INCA1Q0VD86 236 aa26.55■■□□□ 1.84
HMGN1-217ENST00000489072 WDR44Q5JSH3 913 aa26.55■■□□□ 1.84
HMGN1-217ENST00000489072 KRT39Q6A163 491 aa26.55■■□□□ 1.84
HMGN1-217ENST00000489072 TRIM68Q6AZZ1 485 aa26.55■■□□□ 1.84
HMGN1-217ENST00000489072 UNC93AQ86WB7 457 aa26.55■■□□□ 1.84
HMGN1-217ENST00000489072 MSANTD3Q96H12 275 aa26.55■■□□□ 1.84
HMGN1-217ENST00000489072 TWNKQ96RR1 684 aa26.55■■□□□ 1.84
HMGN1-217ENST00000489072 GTPBP4Q9BZE4 634 aaKnown RBP26.55■■□□□ 1.84
HMGN1-217ENST00000489072 HPS4Q9NQG7 708 aa26.55■■□□□ 1.84
HMGN1-217ENST00000489072 TRPM5Q9NZQ8 1165 aa26.55■■□□□ 1.84
HMGN1-217ENST00000489072 ATP8B3O60423 1300 aa26.55■■□□□ 1.84
HMGN1-217ENST00000489072 SLC16A3O15427 465 aaKnown RBP26.54■■□□□ 1.84
HMGN1-217ENST00000489072 BMP6P22004 513 aa26.54■■□□□ 1.84
HMGN1-217ENST00000489072 FKBP3Q00688 224 aaKnown RBP26.54■■□□□ 1.84
HMGN1-217ENST00000489072 ZNF77Q15935 545 aa26.54■■□□□ 1.84
HMGN1-217ENST00000489072 ITPRIPL2Q3MIP1 535 aa26.54■■□□□ 1.84
HMGN1-217ENST00000489072 RALGPS2Q86X27 583 aaPredicted RBP26.54■■□□□ 1.84
HMGN1-217ENST00000489072 C12orf29Q8N999 325 aa26.54■■□□□ 1.84
HMGN1-217ENST00000489072 NIF3L1Q9GZT8 377 aa26.54■■□□□ 1.84
HMGN1-217ENST00000489072 LMAN1LQ9HAT1 526 aa26.54■■□□□ 1.84
HMGN1-217ENST00000489072 EHD2Q9NZN4 543 aa26.54■■□□□ 1.84
HMGN1-217ENST00000489072 PTPRZ1P23471 2315 aaPredicted RBP26.54■■□□□ 1.84
HMGN1-217ENST00000489072 ZNF840PA6NDX5 716 aa26.53■■□□□ 1.84
HMGN1-217ENST00000489072 OTOL1A6NHN0 477 aaPredicted RBP26.53■■□□□ 1.84
HMGN1-217ENST00000489072 LAMTOR5O43504 91 aa26.53■■□□□ 1.84
HMGN1-217ENST00000489072 GFRA3O60609 400 aa26.53■■□□□ 1.84
HMGN1-217ENST00000489072 CHRNB1P11230 501 aa26.53■■□□□ 1.84
HMGN1-217ENST00000489072 HDCP19113 662 aa26.53■■□□□ 1.84
HMGN1-217ENST00000489072 MXI1P50539 228 aa26.53■■□□□ 1.84
HMGN1-217ENST00000489072 LRRC63Q05C16 580 aa26.53■■□□□ 1.84
HMGN1-217ENST00000489072 IFRD2Q12894 506 aaPredicted RBP26.53■■□□□ 1.84
HMGN1-217ENST00000489072 TAF10Q12962 218 aa26.53■■□□□ 1.84
HMGN1-217ENST00000489072 USP4Q13107 963 aa26.53■■□□□ 1.84
HMGN1-217ENST00000489072 MTAPQ13126 283 aa26.53■■□□□ 1.84
HMGN1-217ENST00000489072 ASCL5Q7RTU5 278 aa26.53■■□□□ 1.84
HMGN1-217ENST00000489072 NUP93Q8N1F7 819 aa26.53■■□□□ 1.84
HMGN1-217ENST00000489072 ZMIZ2Q8NF64 920 aa26.53■■□□□ 1.84
HMGN1-217ENST00000489072 SLC2A14Q8TDB8 520 aa26.53■■□□□ 1.84
HMGN1-217ENST00000489072 SMARCD1Q96GM5 515 aa26.53■■□□□ 1.84
HMGN1-217ENST00000489072 CHRDQ9H2X0 955 aa26.53■■□□□ 1.84
HMGN1-217ENST00000489072 EBF3Q9H4W6 596 aa26.53■■□□□ 1.84
HMGN1-217ENST00000489072 CYP3A43Q9HB55 503 aa26.53■■□□□ 1.84
HMGN1-217ENST00000489072 DMAP1Q9NPF5 467 aaPredicted RBP26.53■■□□□ 1.84
HMGN1-217ENST00000489072 KRT82Q9NSB4 513 aa26.53■■□□□ 1.84
HMGN1-217ENST00000489072 FAM49BQ9NUQ9 324 aa26.53■■□□□ 1.84
HMGN1-217ENST00000489072 R4GN57 208 aa26.53■■□□□ 1.84
HMGN1-217ENST00000489072 TNFRSF10BO14763 440 aa26.52■■□□□ 1.84
HMGN1-217ENST00000489072 AP1G2O75843 785 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms