RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 GFRA3O60609 400 aa9.69□□□□□ -0.86
HDAC6-232ENST00000489053 F11P03951 625 aa9.69□□□□□ -0.86
HDAC6-232ENST00000489053 FAM200BP0CF97 657 aa9.69□□□□□ -0.86
HDAC6-232ENST00000489053 TARSP26639 723 aaKnown RBP9.69□□□□□ -0.86
HDAC6-232ENST00000489053 YWHAQP27348 245 aa9.69□□□□□ -0.86
HDAC6-232ENST00000489053 ADORA2BP29275 332 aa9.69□□□□□ -0.86
HDAC6-232ENST00000489053 YWHAEP62258 255 aaKnown RBP9.69□□□□□ -0.86
HDAC6-232ENST00000489053 CSTF1Q05048 431 aaKnown RBP9.69□□□□□ -0.86
HDAC6-232ENST00000489053 ZNF268Q14587 947 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-232ENST00000489053 SPOPLQ6IQ16 392 aa9.69□□□□□ -0.86
HDAC6-232ENST00000489053 FAM35AQ86V20 835 aa9.69□□□□□ -0.86
HDAC6-232ENST00000489053 RALGPS2Q86X27 583 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-232ENST00000489053 NUP93Q8N1F7 819 aa9.69□□□□□ -0.86
HDAC6-232ENST00000489053 FBXL13Q8NEE6 735 aa9.69□□□□□ -0.86
HDAC6-232ENST00000489053 ENGASEQ8NFI3 743 aa9.69□□□□□ -0.86
HDAC6-232ENST00000489053 PLEKHO2Q8TD55 490 aa9.69□□□□□ -0.86
HDAC6-232ENST00000489053 SLC2A14Q8TDB8 520 aa9.69□□□□□ -0.86
HDAC6-232ENST00000489053 TAS1R2Q8TE23 839 aa9.69□□□□□ -0.86
HDAC6-232ENST00000489053 ATRIPQ8WXE1 791 aa9.69□□□□□ -0.86
HDAC6-232ENST00000489053 ERCC4Q92889 916 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-232ENST00000489053 USP13Q92995 863 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-232ENST00000489053 EEF2KMTQ96G04 330 aa9.69□□□□□ -0.86
HDAC6-232ENST00000489053 DHTKD1Q96HY7 919 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-232ENST00000489053 DDX23Q9BUQ8 820 aaKnown RBP9.69□□□□□ -0.86
HDAC6-232ENST00000489053 B3GNT5Q9BYG0 378 aa9.69□□□□□ -0.86
HDAC6-232ENST00000489053 LMAN1LQ9HAT1 526 aa9.69□□□□□ -0.86
HDAC6-232ENST00000489053 METTL14Q9HCE5 456 aaKnown RBP9.69□□□□□ -0.86
HDAC6-232ENST00000489053 GKN1Q9NS71 199 aa9.69□□□□□ -0.86
HDAC6-232ENST00000489053 FAM49BQ9NUQ9 324 aa9.69□□□□□ -0.86
HDAC6-232ENST00000489053 DUS2Q9NX74 493 aaKnown RBP9.69□□□□□ -0.86
HDAC6-232ENST00000489053 DOCK8Q8NF50 2099 aa9.68□□□□□ -0.86
HDAC6-232ENST00000489053 SPECC1L-ADORA2AF8WAN1 911 aa9.68□□□□□ -0.86
HDAC6-232ENST00000489053 BIN1O00499 593 aa9.68□□□□□ -0.86
HDAC6-232ENST00000489053 CLDN5O00501 218 aa9.68□□□□□ -0.86
HDAC6-232ENST00000489053 LRRN2O75325 713 aa9.68□□□□□ -0.86
HDAC6-232ENST00000489053 VNN1O95497 513 aa9.68□□□□□ -0.86
HDAC6-232ENST00000489053 FGFR1OPO95684 399 aaKnown RBP9.68□□□□□ -0.86
HDAC6-232ENST00000489053 MBL2P11226 248 aaPredicted RBP9.68□□□□□ -0.86
HDAC6-232ENST00000489053 CCDC130P13994 396 aa9.68□□□□□ -0.86
HDAC6-232ENST00000489053 PFKLP17858 780 aa9.68□□□□□ -0.86
HDAC6-232ENST00000489053 HOXD11P31277 338 aaPredicted RBP9.68□□□□□ -0.86
HDAC6-232ENST00000489053 RPS9P46781 194 aaKnown RBP9.68□□□□□ -0.86
HDAC6-232ENST00000489053 MLLT6P55198 1093 aaPredicted RBP9.68□□□□□ -0.86
HDAC6-232ENST00000489053 UBE2HP62256 183 aa9.68□□□□□ -0.86
HDAC6-232ENST00000489053 GOLGA8FQ08AF8 430 aa9.68□□□□□ -0.86
HDAC6-232ENST00000489053 GOLGA8DPQ0D2H9 430 aa9.68□□□□□ -0.86
HDAC6-232ENST00000489053 GRSF1Q12849 480 aaKnown RBP eCLIP9.68□□□□□ -0.86
HDAC6-232ENST00000489053 TAF10Q12962 218 aa9.68□□□□□ -0.86
HDAC6-232ENST00000489053 ORC1Q13415 861 aa9.68□□□□□ -0.86
HDAC6-232ENST00000489053 MTF1Q14872 753 aa9.68□□□□□ -0.86
HDAC6-232ENST00000489053 DGKKQ5KSL6 1271 aa9.68□□□□□ -0.86
HDAC6-232ENST00000489053 DDX42Q86XP3 938 aaKnown RBP eCLIP9.68□□□□□ -0.86
HDAC6-232ENST00000489053 ADSSL1Q8N142 457 aa9.68□□□□□ -0.86
HDAC6-232ENST00000489053 ARL14EPQ8N8R7 260 aaPredicted RBP9.68□□□□□ -0.86
HDAC6-232ENST00000489053 SH3RF2Q8TEC5 729 aa9.68□□□□□ -0.86
HDAC6-232ENST00000489053 ATP2A3Q93084 1043 aa9.68□□□□□ -0.86
HDAC6-232ENST00000489053 JAKMIP2Q96AA8 810 aa9.68□□□□□ -0.86
HDAC6-232ENST00000489053 ELMO3Q96BJ8 720 aa9.68□□□□□ -0.86
HDAC6-232ENST00000489053 RSPRY1Q96DX4 576 aa9.68□□□□□ -0.86
HDAC6-232ENST00000489053 IER2Q9BTL4 223 aa9.68□□□□□ -0.86
HDAC6-232ENST00000489053 GZF1Q9H116 711 aaPredicted RBP9.68□□□□□ -0.86
HDAC6-232ENST00000489053 FBXO44Q9H4M3 255 aa9.68□□□□□ -0.86
HDAC6-232ENST00000489053 EBF3Q9H4W6 596 aa9.68□□□□□ -0.86
HDAC6-232ENST00000489053 GTSE1Q9NYZ3 720 aa9.68□□□□□ -0.86
HDAC6-232ENST00000489053 CCL26Q9Y258 94 aa9.68□□□□□ -0.86
HDAC6-232ENST00000489053 MTF2Q9Y483 593 aaPredicted RBP9.68□□□□□ -0.86
HDAC6-232ENST00000489053 TCHHQ07283 1943 aa9.68□□□□□ -0.86
HDAC6-232ENST00000489053 ANK1P16157 1881 aa9.68□□□□□ -0.86
HDAC6-232ENST00000489053 TSC2P49815 1807 aa9.68□□□□□ -0.86
HDAC6-232ENST00000489053 C2orf78A6NCI8 922 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 SLC9A3R1O14745 358 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-232ENST00000489053 NFATC1O95644 943 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 GNA14O95837 355 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 CTHP32929 405 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 NBL1P41271 181 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 ASPAP45381 313 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 SOX9P48436 509 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 CCR3P51677 355 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 SLC5A3P53794 718 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 NRLP54845 237 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 MAP3K7CLP57077 242 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 TNK2Q07912 1038 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 PPP3CAQ08209 521 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 RUNX3Q13761 415 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 PON2Q15165 354 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 TPD52L1Q16890 204 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-232ENST00000489053 ZCWPW2Q504Y3 356 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 COBLL1Q53SF7 1204 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 HECTD3Q5T447 861 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 ANKRD40Q6AI12 368 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 POTEHQ6S545 545 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 TMEM150AQ86TG1 271 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 TADA2BQ86TJ2 420 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 CREBRFQ8IUR6 639 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 ELOA2Q8IYF1 753 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-232ENST00000489053 CCDC26Q8TAB7 109 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 OSCP1Q8WVF1 389 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 NELFBQ8WX92 580 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 OVCA2Q8WZ82 227 aa9.67□□□□□ -0.86
HDAC6-232ENST00000489053 SECISBP2LQ93073 1101 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms