RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 ORC1Q13415 861 aa15.16■□□□□ 0.02
BRCA1-218ENST00000489037 ARHGAP29Q52LW3 1261 aa15.16■□□□□ 0.02
BRCA1-218ENST00000489037 TXNDC8Q6A555 127 aa15.16■□□□□ 0.02
BRCA1-218ENST00000489037 GPIHBP1Q8IV16 184 aa15.16■□□□□ 0.02
BRCA1-218ENST00000489037 NUP93Q8N1F7 819 aa15.16■□□□□ 0.02
BRCA1-218ENST00000489037 BPIFB1Q8TDL5 484 aa15.16■□□□□ 0.02
BRCA1-218ENST00000489037 SLITRK1Q96PX8 696 aa15.16■□□□□ 0.02
BRCA1-218ENST00000489037 KIF9Q9HAQ2 790 aa15.16■□□□□ 0.02
BRCA1-218ENST00000489037 TRPC7Q9HCX4 862 aa15.16■□□□□ 0.02
BRCA1-218ENST00000489037 FAM49BQ9NUQ9 324 aa15.16■□□□□ 0.02
BRCA1-218ENST00000489037 RAPGEFL1Q9UHV5 662 aa15.16■□□□□ 0.02
BRCA1-218ENST00000489037 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.16■□□□□ 0.02
BRCA1-218ENST00000489037 TICRRQ7Z2Z1 1910 aa15.15■□□□□ 0.02
BRCA1-218ENST00000489037 F5P12259 2224 aa15.15■□□□□ 0.02
BRCA1-218ENST00000489037 CHADO15335 359 aa15.15■□□□□ 0.02
BRCA1-218ENST00000489037 P4HA2O15460 535 aa15.15■□□□□ 0.02
BRCA1-218ENST00000489037 CILPO75339 1184 aa15.15■□□□□ 0.02
BRCA1-218ENST00000489037 ABL1P00519 1130 aa15.15■□□□□ 0.02
BRCA1-218ENST00000489037 USP17L7P0C7H9 530 aa15.15■□□□□ 0.02
BRCA1-218ENST00000489037 FAM200BP0CF97 657 aa15.15■□□□□ 0.02
BRCA1-218ENST00000489037 NPR3P17342 541 aa15.15■□□□□ 0.02
BRCA1-218ENST00000489037 PFKLP17858 780 aa15.15■□□□□ 0.02
BRCA1-218ENST00000489037 TBXAS1P24557 533 aaPredicted RBP15.15■□□□□ 0.02
BRCA1-218ENST00000489037 YWHAQP27348 245 aa15.15■□□□□ 0.02
BRCA1-218ENST00000489037 ADORA2BP29275 332 aa15.15■□□□□ 0.02
BRCA1-218ENST00000489037 STARD6P59095 220 aa15.15■□□□□ 0.02
BRCA1-218ENST00000489037 PLCB2Q00722 1185 aa15.15■□□□□ 0.02
BRCA1-218ENST00000489037 IFRD2Q12894 506 aaPredicted RBP15.15■□□□□ 0.02
BRCA1-218ENST00000489037 TMEM150AQ86TG1 271 aa15.15■□□□□ 0.02
BRCA1-218ENST00000489037 FUKQ8N0W3 1084 aa15.15■□□□□ 0.02
BRCA1-218ENST00000489037 SLC2A14Q8TDB8 520 aa15.15■□□□□ 0.02
BRCA1-218ENST00000489037 TATDN2Q93075 761 aa15.15■□□□□ 0.02
BRCA1-218ENST00000489037 CYFIP2Q96F07 1278 aa15.15■□□□□ 0.02
BRCA1-218ENST00000489037 HEXIM2Q96MH2 286 aaKnown RBP15.15■□□□□ 0.02
BRCA1-218ENST00000489037 NT5C1BQ96P26 610 aa15.15■□□□□ 0.02
BRCA1-218ENST00000489037 NELL2Q99435 816 aa15.15■□□□□ 0.02
BRCA1-218ENST00000489037 TTLL2Q9BWV7 592 aa15.15■□□□□ 0.02
BRCA1-218ENST00000489037 IRF2BPLQ9H1B7 796 aa15.15■□□□□ 0.02
BRCA1-218ENST00000489037 TRPV5Q9NQA5 729 aa15.15■□□□□ 0.02
BRCA1-218ENST00000489037 KRT82Q9NSB4 513 aa15.15■□□□□ 0.02
BRCA1-218ENST00000489037 CISHQ9NSE2 258 aa15.15■□□□□ 0.02
BRCA1-218ENST00000489037 TDP1Q9NUW8 608 aa15.15■□□□□ 0.02
BRCA1-218ENST00000489037 COMMD8Q9NX08 183 aa15.15■□□□□ 0.02
BRCA1-218ENST00000489037 HMGXB4Q9UGU5 601 aa15.15■□□□□ 0.02
BRCA1-218ENST00000489037 MRPS17Q9Y2R5 130 aaKnown RBP15.15■□□□□ 0.02
BRCA1-218ENST00000489037 KANSL1LA0AUZ9 987 aa15.14■□□□□ 0.01
BRCA1-218ENST00000489037 MAN2B1O00754 1011 aa15.14■□□□□ 0.01
BRCA1-218ENST00000489037 PMM2O15305 246 aa15.14■□□□□ 0.01
BRCA1-218ENST00000489037 LRRN2O75325 713 aa15.14■□□□□ 0.01
BRCA1-218ENST00000489037 AFPP02771 609 aaKnown RBP15.14■□□□□ 0.01
BRCA1-218ENST00000489037 CKMP06732 381 aa15.14■□□□□ 0.01
BRCA1-218ENST00000489037 CCDC130P13994 396 aa15.14■□□□□ 0.01
BRCA1-218ENST00000489037 MARSP56192 900 aaKnown RBP15.14■□□□□ 0.01
BRCA1-218ENST00000489037 FCHO2Q0JRZ9 810 aa15.14■□□□□ 0.01
BRCA1-218ENST00000489037 KCNH2Q12809 1159 aa15.14■□□□□ 0.01
BRCA1-218ENST00000489037 LRMPQ12912 555 aa15.14■□□□□ 0.01
BRCA1-218ENST00000489037 ZNF394Q53GI3 561 aa15.14■□□□□ 0.01
BRCA1-218ENST00000489037 CWF19L1Q69YN2 538 aaKnown RBP15.14■□□□□ 0.01
BRCA1-218ENST00000489037 CC2D1AQ6P1N0 951 aaPredicted RBP15.14■□□□□ 0.01
BRCA1-218ENST00000489037 ZNF852Q6ZMS4 543 aa15.14■□□□□ 0.01
BRCA1-218ENST00000489037 TPRG1Q6ZUI0 275 aa15.14■□□□□ 0.01
BRCA1-218ENST00000489037 C12orf29Q8N999 325 aa15.14■□□□□ 0.01
BRCA1-218ENST00000489037 PDZD8Q8NEN9 1154 aa15.14■□□□□ 0.01
BRCA1-218ENST00000489037 FBXO32Q969P5 355 aa15.14■□□□□ 0.01
BRCA1-218ENST00000489037 KCNK16Q96T55 309 aa15.14■□□□□ 0.01
BRCA1-218ENST00000489037 HNRNPABQ99729 332 aaKnown RBP15.14■□□□□ 0.01
BRCA1-218ENST00000489037 SIT1Q9Y3P8 196 aa15.14■□□□□ 0.01
BRCA1-218ENST00000489037 MUC6Q6W4X9 2439 aa15.13■□□□□ 0.01
BRCA1-218ENST00000489037 NCAM2O15394 837 aa15.13■□□□□ 0.01
BRCA1-218ENST00000489037 PRAMEF12O95522 483 aa15.13■□□□□ 0.01
BRCA1-218ENST00000489037 GLULP15104 373 aa15.13■□□□□ 0.01
BRCA1-218ENST00000489037 HDCP19113 662 aa15.13■□□□□ 0.01
BRCA1-218ENST00000489037 KPNA1P52294 538 aaPredicted RBP15.13■□□□□ 0.01
BRCA1-218ENST00000489037 CACNA2D1P54289 1103 aa15.13■□□□□ 0.01
BRCA1-218ENST00000489037 MAP3K7CLP57077 242 aa15.13■□□□□ 0.01
BRCA1-218ENST00000489037 SLC8A3P57103 927 aa15.13■□□□□ 0.01
BRCA1-218ENST00000489037 USP46P62068 366 aa15.13■□□□□ 0.01
BRCA1-218ENST00000489037 TAF10Q12962 218 aa15.13■□□□□ 0.01
BRCA1-218ENST00000489037 CUL2Q13617 745 aa15.13■□□□□ 0.01
BRCA1-218ENST00000489037 ZNF268Q14587 947 aaPredicted RBP15.13■□□□□ 0.01
BRCA1-218ENST00000489037 UBXN2BQ14CS0 331 aa15.13■□□□□ 0.01
BRCA1-218ENST00000489037 C1orf228Q6PIY5 440 aa15.13■□□□□ 0.01
BRCA1-218ENST00000489037 PAQR9Q6ZVX9 377 aa15.13■□□□□ 0.01
BRCA1-218ENST00000489037 FAM114A1Q8IWE2 563 aa15.13■□□□□ 0.01
BRCA1-218ENST00000489037 TRIM59Q8IWR1 403 aa15.13■□□□□ 0.01
BRCA1-218ENST00000489037 TMEM105Q8N8V8 129 aa15.13■□□□□ 0.01
BRCA1-218ENST00000489037 OVCA2Q8WZ82 227 aa15.13■□□□□ 0.01
BRCA1-218ENST00000489037 TMEM176AQ96HP8 235 aa15.13■□□□□ 0.01
BRCA1-218ENST00000489037 TWNKQ96RR1 684 aa15.13■□□□□ 0.01
BRCA1-218ENST00000489037 SMG9Q9H0W8 520 aaKnown RBP15.13■□□□□ 0.01
BRCA1-218ENST00000489037 FBXO44Q9H4M3 255 aa15.13■□□□□ 0.01
BRCA1-218ENST00000489037 HEBP1Q9NRV9 189 aa15.13■□□□□ 0.01
BRCA1-218ENST00000489037 HELZP42694 1942 aaKnown RBP15.12■□□□□ 0.01
BRCA1-218ENST00000489037 TADA3O75528 432 aa15.12■□□□□ 0.01
BRCA1-218ENST00000489037 MTIF2P46199 727 aaKnown RBP15.12■□□□□ 0.01
BRCA1-218ENST00000489037 SLC5A3P53794 718 aa15.12■□□□□ 0.01
BRCA1-218ENST00000489037 PTPN5P54829 565 aa15.12■□□□□ 0.01
BRCA1-218ENST00000489037 IER5LQ5T953 404 aa15.12■□□□□ 0.01
BRCA1-218ENST00000489037 ARL14EPQ8N8R7 260 aaPredicted RBP15.12■□□□□ 0.01
BRCA1-218ENST00000489037 TTC16Q8NEE8 873 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms