RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 STAT1P42224 750 aa16.89■□□□□ 0.29
HDAC7-224ENST00000488927 GPR15P49685 360 aa16.89■□□□□ 0.29
HDAC7-224ENST00000488927 MAP3K7CLP57077 242 aa16.89■□□□□ 0.29
HDAC7-224ENST00000488927 JAM2P57087 298 aa16.89■□□□□ 0.29
HDAC7-224ENST00000488927 BST2Q10589 180 aaKnown RBP16.89■□□□□ 0.29
HDAC7-224ENST00000488927 GOLGA7BQ2TAP0 167 aa16.89■□□□□ 0.29
HDAC7-224ENST00000488927 SARM1Q6SZW1 724 aa16.89■□□□□ 0.29
HDAC7-224ENST00000488927 NUP93Q8N1F7 819 aa16.89■□□□□ 0.29
HDAC7-224ENST00000488927 GCNAQ96QF7 691 aa16.89■□□□□ 0.29
HDAC7-224ENST00000488927 KCNK16Q96T55 309 aa16.89■□□□□ 0.29
HDAC7-224ENST00000488927 SMOQ99835 787 aa16.89■□□□□ 0.29
HDAC7-224ENST00000488927 XPO4Q9C0E2 1151 aaKnown RBP16.89■□□□□ 0.29
HDAC7-224ENST00000488927 POMKQ9H5K3 350 aa16.89■□□□□ 0.29
HDAC7-224ENST00000488927 HCFC1R1Q9NWW0 138 aa16.89■□□□□ 0.29
HDAC7-224ENST00000488927 MRPS23Q9Y3D9 190 aaKnown RBP16.89■□□□□ 0.29
HDAC7-224ENST00000488927 NR2E1Q9Y466 385 aa16.89■□□□□ 0.29
HDAC7-224ENST00000488927 ZFP37Q9Y6Q3 630 aaPredicted RBP16.89■□□□□ 0.29
HDAC7-224ENST00000488927 THAP12O43422 761 aa16.88■□□□□ 0.29
HDAC7-224ENST00000488927 HMGA1P17096 107 aaKnown RBP16.88■□□□□ 0.29
HDAC7-224ENST00000488927 BRD2P25440 801 aaKnown RBP16.88■□□□□ 0.29
HDAC7-224ENST00000488927 SOX5P35711 763 aa16.88■□□□□ 0.29
HDAC7-224ENST00000488927 PBX1P40424 430 aa16.88■□□□□ 0.29
HDAC7-224ENST00000488927 PPP3CCP48454 512 aa16.88■□□□□ 0.29
HDAC7-224ENST00000488927 PDE6CP51160 858 aa16.88■□□□□ 0.29
HDAC7-224ENST00000488927 KCNQ1P51787 676 aa16.88■□□□□ 0.29
HDAC7-224ENST00000488927 CACNA2D1P54289 1103 aa16.88■□□□□ 0.29
HDAC7-224ENST00000488927 PLCB2Q00722 1185 aa16.88■□□□□ 0.29
HDAC7-224ENST00000488927 SDHAF4Q5VUM1 108 aa16.88■□□□□ 0.29
HDAC7-224ENST00000488927 OTOP3Q7RTS5 596 aa16.88■□□□□ 0.29
HDAC7-224ENST00000488927 GAS2L3Q86XJ1 694 aa16.88■□□□□ 0.29
HDAC7-224ENST00000488927 TMC8Q8IU68 726 aa16.88■□□□□ 0.29
HDAC7-224ENST00000488927 GPR152Q8TDT2 470 aa16.88■□□□□ 0.29
HDAC7-224ENST00000488927 ZNF606Q8WXB4 792 aa16.88■□□□□ 0.29
HDAC7-224ENST00000488927 TFAP2BQ92481 460 aa16.88■□□□□ 0.29
HDAC7-224ENST00000488927 ACSF2Q96CM8 615 aaPredicted RBP16.88■□□□□ 0.29
HDAC7-224ENST00000488927 TTLL2Q9BWV7 592 aa16.88■□□□□ 0.29
HDAC7-224ENST00000488927 LRRC3Q9BY71 257 aa16.88■□□□□ 0.29
HDAC7-224ENST00000488927 FBXO44Q9H4M3 255 aa16.88■□□□□ 0.29
HDAC7-224ENST00000488927 TMEM30AQ9NV96 361 aa16.88■□□□□ 0.29
HDAC7-224ENST00000488927 ZMYM5Q9UJ78 669 aa16.88■□□□□ 0.29
HDAC7-224ENST00000488927 MAGED2Q9UNF1 606 aaPredicted RBP16.88■□□□□ 0.29
HDAC7-224ENST00000488927 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.88■□□□□ 0.291e-7■□□□□ 9.2
HDAC7-224ENST00000488927 ITIH6Q6UXX5 1313 aa16.88■□□□□ 0.29
HDAC7-224ENST00000488927 SOBPA7XYQ1 873 aa16.87■□□□□ 0.29
HDAC7-224ENST00000488927 M0QYV0 167 aa16.87■□□□□ 0.29
HDAC7-224ENST00000488927 XPO1O14980 1071 aaKnown RBP16.87■□□□□ 0.29
HDAC7-224ENST00000488927 SLC34A2O95436 690 aa16.87■□□□□ 0.29
HDAC7-224ENST00000488927 MYL4P12829 197 aa16.87■□□□□ 0.29
HDAC7-224ENST00000488927 IL9P15248 144 aa16.87■□□□□ 0.29
HDAC7-224ENST00000488927 CLCN1P35523 988 aa16.87■□□□□ 0.29
HDAC7-224ENST00000488927 TJAP1Q5JTD0 557 aa16.87■□□□□ 0.29
HDAC7-224ENST00000488927 TTC30AQ86WT1 665 aa16.87■□□□□ 0.29
HDAC7-224ENST00000488927 ZNF677Q86XU0 584 aa16.87■□□□□ 0.29
HDAC7-224ENST00000488927 HS6ST3Q8IZP7 471 aa16.87■□□□□ 0.29
HDAC7-224ENST00000488927 ZMIZ2Q8NF64 920 aa16.87■□□□□ 0.29
HDAC7-224ENST00000488927 ZNF397Q8NF99 534 aaPredicted RBP16.87■□□□□ 0.29
HDAC7-224ENST00000488927 SLITRK1Q96PX8 696 aa16.87■□□□□ 0.29
HDAC7-224ENST00000488927 NUCKS1Q9H1E3 243 aaKnown RBP16.87■□□□□ 0.29
HDAC7-224ENST00000488927 CDH22Q9UJ99 828 aa16.87■□□□□ 0.29
HDAC7-224ENST00000488927 A0A1W2PQJ5 194 aa16.86■□□□□ 0.29
HDAC7-224ENST00000488927 TNFRSF10BO14763 440 aa16.86■□□□□ 0.29
HDAC7-224ENST00000488927 BEST1O76090 585 aa16.86■□□□□ 0.29
HDAC7-224ENST00000488927 BMP1P13497 986 aa16.86■□□□□ 0.29
HDAC7-224ENST00000488927 CYP11B1P15538 503 aa16.86■□□□□ 0.29
HDAC7-224ENST00000488927 YWHAQP27348 245 aa16.86■□□□□ 0.29
HDAC7-224ENST00000488927 GABRR2P28476 465 aa16.86■□□□□ 0.29
HDAC7-224ENST00000488927 KRT9P35527 623 aa16.86■□□□□ 0.29
HDAC7-224ENST00000488927 PLA2G4AP47712 749 aa16.86■□□□□ 0.29
HDAC7-224ENST00000488927 SLC5A3P53794 718 aa16.86■□□□□ 0.29
HDAC7-224ENST00000488927 NTHL1P78549 312 aa16.86■□□□□ 0.29
HDAC7-224ENST00000488927 PDE4CQ08493 712 aa16.86■□□□□ 0.29
HDAC7-224ENST00000488927 MTMR3Q13615 1198 aa16.86■□□□□ 0.29
HDAC7-224ENST00000488927 TRIM14Q14142 442 aa16.86■□□□□ 0.29
HDAC7-224ENST00000488927 PKDCCQ504Y2 493 aa16.86■□□□□ 0.29
HDAC7-224ENST00000488927 ARHGAP15Q53QZ3 475 aa16.86■□□□□ 0.29
HDAC7-224ENST00000488927 PRSS36Q5K4E3 855 aa16.86■□□□□ 0.29
HDAC7-224ENST00000488927 GET4Q7L5D6 327 aaPredicted RBP16.86■□□□□ 0.29
HDAC7-224ENST00000488927 SLC47A2Q86VL8 602 aa16.86■□□□□ 0.29
HDAC7-224ENST00000488927 ADHFE1Q8IWW8 467 aa16.86■□□□□ 0.29
HDAC7-224ENST00000488927 PLCD3Q8N3E9 789 aa16.86■□□□□ 0.29
HDAC7-224ENST00000488927 TDRD5Q8NAT2 981 aaKnown RBP16.86■□□□□ 0.29
HDAC7-224ENST00000488927 PDZD8Q8NEN9 1154 aa16.86■□□□□ 0.29
HDAC7-224ENST00000488927 FEZF2Q8TBJ5 459 aa16.86■□□□□ 0.29
HDAC7-224ENST00000488927 OVCA2Q8WZ82 227 aa16.86■□□□□ 0.29
HDAC7-224ENST00000488927 ZSWIM1Q9BR11 485 aa16.86■□□□□ 0.29
HDAC7-224ENST00000488927 TRIM5Q9C035 493 aa16.86■□□□□ 0.29
HDAC7-224ENST00000488927 GDE1Q9NZC3 331 aa16.86■□□□□ 0.29
HDAC7-224ENST00000488927 IL37Q9NZH6 218 aa16.86■□□□□ 0.29
HDAC7-224ENST00000488927 PCDHGC3Q9UN70 934 aa16.86■□□□□ 0.29
HDAC7-224ENST00000488927 CEP83Q9Y592 693 aa16.86■□□□□ 0.29
HDAC7-224ENST00000488927 PTPRDP23468 1912 aa16.86■□□□□ 0.29
HDAC7-224ENST00000488927 HHLA1C9JL84 531 aa16.85■□□□□ 0.29
HDAC7-224ENST00000488927 GFPT2O94808 682 aa16.85■□□□□ 0.29
HDAC7-224ENST00000488927 PNMA6AP0CW24 399 aaPredicted RBP16.85■□□□□ 0.29
HDAC7-224ENST00000488927 FERP16591 822 aa16.85■□□□□ 0.29
HDAC7-224ENST00000488927 DDX6P26196 483 aaKnown RBP eCLIP16.85■□□□□ 0.29
HDAC7-224ENST00000488927 GBP2P32456 591 aaPredicted RBP16.85■□□□□ 0.29
HDAC7-224ENST00000488927 SLC5A9Q2M3M2 681 aa16.85■□□□□ 0.29
HDAC7-224ENST00000488927 SPECC1LQ69YQ0 1117 aa16.85■□□□□ 0.29
HDAC7-224ENST00000488927 PIGZQ86VD9 579 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms