RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 SPTLC3Q9NUV7 552 aa13.02□□□□□ -0.33
TRAIP-209ENST00000488860 INSL5Q9Y5Q6 135 aa13.02□□□□□ -0.33
TRAIP-209ENST00000488860 HCFC2Q9Y5Z7 792 aa13.02□□□□□ -0.33
TRAIP-209ENST00000488860 SSU72P8A0A1W2PR75 194 aa13.01□□□□□ -0.33
TRAIP-209ENST00000488860 XPO1O14980 1071 aaKnown RBP13.01□□□□□ -0.33
TRAIP-209ENST00000488860 LSM8O95777 96 aaKnown RBP13.01□□□□□ -0.33
TRAIP-209ENST00000488860 LRG1P02750 347 aa13.01□□□□□ -0.33
TRAIP-209ENST00000488860 ATF6P18850 670 aa13.01□□□□□ -0.33
TRAIP-209ENST00000488860 CYLC1P35663 651 aaPredicted RBP13.01□□□□□ -0.33
TRAIP-209ENST00000488860 NSFP46459 744 aaKnown RBP13.01□□□□□ -0.33
TRAIP-209ENST00000488860 ALDH1A3P47895 512 aa13.01□□□□□ -0.33
TRAIP-209ENST00000488860 TUFMP49411 452 aaKnown RBP13.01□□□□□ -0.33
TRAIP-209ENST00000488860 RPL10AP62906 217 aaKnown RBP13.01□□□□□ -0.33
TRAIP-209ENST00000488860 RBM10P98175 930 aaKnown RBP13.01□□□□□ -0.33
TRAIP-209ENST00000488860 CDK17Q00537 523 aa13.01□□□□□ -0.33
TRAIP-209ENST00000488860 GFPT1Q06210 699 aaPredicted RBP13.01□□□□□ -0.33
TRAIP-209ENST00000488860 HYAL1Q12794 435 aa13.01□□□□□ -0.33
TRAIP-209ENST00000488860 PDCLQ13371 301 aa13.01□□□□□ -0.33
TRAIP-209ENST00000488860 MAPK8IP2Q13387 824 aaPredicted RBP13.01□□□□□ -0.33
TRAIP-209ENST00000488860 ADGRE1Q14246 886 aa13.01□□□□□ -0.33
TRAIP-209ENST00000488860 VEPH1Q14D04 833 aa13.01□□□□□ -0.33
TRAIP-209ENST00000488860 PKDCCQ504Y2 493 aa13.01□□□□□ -0.33
TRAIP-209ENST00000488860 PPM1LQ5SGD2 360 aa13.01□□□□□ -0.33
TRAIP-209ENST00000488860 ELMSAN1Q6PJG2 1045 aa13.01□□□□□ -0.33
TRAIP-209ENST00000488860 CCDC149Q6ZUS6 474 aa13.01□□□□□ -0.33
TRAIP-209ENST00000488860 TMTC1Q8IUR5 882 aa13.01□□□□□ -0.33
TRAIP-209ENST00000488860 TMEM139Q8IV31 216 aa13.01□□□□□ -0.33
TRAIP-209ENST00000488860 LRRC8AQ8IWT6 810 aa13.01□□□□□ -0.33
TRAIP-209ENST00000488860 CCDC112Q8NEF3 446 aa13.01□□□□□ -0.33
TRAIP-209ENST00000488860 ZMIZ2Q8NF64 920 aa13.01□□□□□ -0.33
TRAIP-209ENST00000488860 SLC30A5Q8TAD4 765 aa13.01□□□□□ -0.33
TRAIP-209ENST00000488860 OLIG1Q8TAK6 271 aa13.01□□□□□ -0.33
TRAIP-209ENST00000488860 IPO4Q8TEX9 1081 aaKnown RBP13.01□□□□□ -0.33
TRAIP-209ENST00000488860 SLC22A17Q8WUG5 538 aa13.01□□□□□ -0.33
TRAIP-209ENST00000488860 CPA5Q8WXQ8 436 aa13.01□□□□□ -0.33
TRAIP-209ENST00000488860 MYLIPQ8WY64 445 aa13.01□□□□□ -0.33
TRAIP-209ENST00000488860 NOX5Q96PH1 765 aa13.01□□□□□ -0.33
TRAIP-209ENST00000488860 SYT11Q9BT88 431 aa13.01□□□□□ -0.33
TRAIP-209ENST00000488860 SYNCQ9H7C4 482 aa13.01□□□□□ -0.33
TRAIP-209ENST00000488860 LMCD1Q9NZU5 365 aa13.01□□□□□ -0.33
TRAIP-209ENST00000488860 ADAMTS1Q9UHI8 967 aa13.01□□□□□ -0.33
TRAIP-209ENST00000488860 MTCH2Q9Y6C9 303 aa13.01□□□□□ -0.33
TRAIP-209ENST00000488860 REV3LO60673 3130 aa13□□□□□ -0.33
TRAIP-209ENST00000488860 DOCK6Q96HP0 2047 aa13□□□□□ -0.33
TRAIP-209ENST00000488860 ANAPC1Q9H1A4 1944 aa13□□□□□ -0.33
TRAIP-209ENST00000488860 A0A087X0T9 212 aa13□□□□□ -0.33
TRAIP-209ENST00000488860 CCL16O15467 120 aa13□□□□□ -0.33
TRAIP-209ENST00000488860 CYP1A1P04798 512 aaPredicted RBP13□□□□□ -0.33
TRAIP-209ENST00000488860 FAM228BP0C875 321 aa13□□□□□ -0.33
TRAIP-209ENST00000488860 LCP1P13796 627 aa13□□□□□ -0.33
TRAIP-209ENST00000488860 FECHP22830 423 aa13□□□□□ -0.33
TRAIP-209ENST00000488860 GPD2P43304 727 aa13□□□□□ -0.33
TRAIP-209ENST00000488860 PLA2G4AP47712 749 aa13□□□□□ -0.33
TRAIP-209ENST00000488860 SLC5A3P53794 718 aa13□□□□□ -0.33
TRAIP-209ENST00000488860 EPHB3P54753 998 aa13□□□□□ -0.33
TRAIP-209ENST00000488860 PLD1Q13393 1074 aa13□□□□□ -0.33
TRAIP-209ENST00000488860 MTF1Q14872 753 aa13□□□□□ -0.33
TRAIP-209ENST00000488860 LILRA6Q6PI73 481 aa13□□□□□ -0.33
TRAIP-209ENST00000488860 EP400NLQ6ZTU2 488 aa13□□□□□ -0.33
TRAIP-209ENST00000488860 GPRIN1Q7Z2K8 1008 aa13□□□□□ -0.33
TRAIP-209ENST00000488860 PIGZQ86VD9 579 aa13□□□□□ -0.33
TRAIP-209ENST00000488860 DNAAF5Q86Y56 855 aa13□□□□□ -0.33
TRAIP-209ENST00000488860 TCEAL8Q8IYN2 117 aa13□□□□□ -0.33
TRAIP-209ENST00000488860 DEFB123Q8N688 67 aa13□□□□□ -0.33
TRAIP-209ENST00000488860 MSANTD4Q8NCY6 345 aa13□□□□□ -0.33
TRAIP-209ENST00000488860 CASP10Q92851 521 aa13□□□□□ -0.33
TRAIP-209ENST00000488860 ZNF830Q96NB3 372 aaPredicted RBP13□□□□□ -0.33
TRAIP-209ENST00000488860 C11orf70Q9BRQ4 267 aa13□□□□□ -0.33
TRAIP-209ENST00000488860 LHX5Q9H2C1 402 aa13□□□□□ -0.33
TRAIP-209ENST00000488860 LRRC4Q9HBW1 653 aa13□□□□□ -0.33
TRAIP-209ENST00000488860 CSNK1G1Q9HCP0 422 aa13□□□□□ -0.33
TRAIP-209ENST00000488860 TAS2R14Q9NYV8 317 aa13□□□□□ -0.33
TRAIP-209ENST00000488860 CYTH4Q9UIA0 394 aa13□□□□□ -0.33
TRAIP-209ENST00000488860 MAFFQ9ULX9 164 aa13□□□□□ -0.33
TRAIP-209ENST00000488860 MAGED2Q9UNF1 606 aaPredicted RBP13□□□□□ -0.33
TRAIP-209ENST00000488860 SLC38A8A6NNN8 435 aa12.99□□□□□ -0.33
TRAIP-209ENST00000488860 E5RJQ4 531 aa12.99□□□□□ -0.33
TRAIP-209ENST00000488860 LINC01565O15544 149 aa12.99□□□□□ -0.33
TRAIP-209ENST00000488860 RFPL2O75678 378 aa12.99□□□□□ -0.33
TRAIP-209ENST00000488860 SRGAP2BP0DMP2 458 aa12.99□□□□□ -0.33
TRAIP-209ENST00000488860 UNGP13051 313 aaPredicted RBP12.99□□□□□ -0.33
TRAIP-209ENST00000488860 CDH5P33151 784 aaPredicted RBP12.99□□□□□ -0.33
TRAIP-209ENST00000488860 CCZ1BP86790 482 aa12.99□□□□□ -0.33
TRAIP-209ENST00000488860 CCZ1P86791 482 aaPredicted RBP12.99□□□□□ -0.33
TRAIP-209ENST00000488860 CENPCQ03188 943 aa12.99□□□□□ -0.33
TRAIP-209ENST00000488860 ADIGQ0VDE8 80 aa12.99□□□□□ -0.33
TRAIP-209ENST00000488860 MTMR3Q13615 1198 aa12.99□□□□□ -0.33
TRAIP-209ENST00000488860 TAF12Q16514 161 aa12.99□□□□□ -0.33
TRAIP-209ENST00000488860 SLC18A3Q16572 532 aa12.99□□□□□ -0.33
TRAIP-209ENST00000488860 PTPN20Q4JDL3 420 aa12.99□□□□□ -0.33
TRAIP-209ENST00000488860 C2CD6Q53TS8 623 aa12.99□□□□□ -0.33
TRAIP-209ENST00000488860 CCDC122Q5T0U0 273 aa12.99□□□□□ -0.33
TRAIP-209ENST00000488860 CYP4A22Q5TCH4 519 aa12.99□□□□□ -0.33
TRAIP-209ENST00000488860 PMF1Q6P1K2 205 aa12.99□□□□□ -0.33
TRAIP-209ENST00000488860 RAD9BQ6WBX8 426 aa12.99□□□□□ -0.33
TRAIP-209ENST00000488860 MMS22LQ6ZRQ5 1243 aa12.99□□□□□ -0.33
TRAIP-209ENST00000488860 ERICH1Q86X53 443 aa12.99□□□□□ -0.33
TRAIP-209ENST00000488860 CCDC170Q8IYT3 715 aa12.99□□□□□ -0.33
TRAIP-209ENST00000488860 SIX6OS1Q8N1H7 587 aa12.99□□□□□ -0.33
TRAIP-209ENST00000488860 ELMOD1Q8N336 334 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms