RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 MARCH9Q86YJ5 346 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 SFTPA1Q8IWL2 248 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 SCN4BQ8IWT1 228 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 CD302Q8IX05 232 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 ADGRG2Q8IZP9 1017 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 GALNT15Q8N3T1 639 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 SNX29Q8TEQ0 813 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 HSPA12BQ96MM6 686 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 NTPCRQ9BSD7 190 aaKnown RBP9.97□□□□□ -0.81
COL17A1-207ENST00000488320 HAPLN2Q9GZV7 340 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 PRDM16Q9HAZ2 1276 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 TMLHEQ9NVH6 421 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 CYP8B1Q9UNU6 501 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 SCN1AP35498 2009 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 MYOFQ9NZM1 2061 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 ANAPC1Q9H1A4 1944 aa9.96□□□□□ -0.81
COL17A1-207ENST00000488320 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.96□□□□□ -0.82
COL17A1-207ENST00000488320 LEFTY2O00292 366 aa9.96□□□□□ -0.82
COL17A1-207ENST00000488320 SLC9A3R1O14745 358 aaPredicted RBP9.96□□□□□ -0.82
COL17A1-207ENST00000488320 ADAM23O75077 832 aa9.96□□□□□ -0.82
COL17A1-207ENST00000488320 ZNF217O75362 1048 aa9.96□□□□□ -0.82
COL17A1-207ENST00000488320 TADA3O75528 432 aa9.96□□□□□ -0.82
COL17A1-207ENST00000488320 GJB3O75712 270 aa9.96□□□□□ -0.82
COL17A1-207ENST00000488320 C1QL1O75973 258 aa9.96□□□□□ -0.82
COL17A1-207ENST00000488320 CTDNEP1O95476 244 aa9.96□□□□□ -0.82
COL17A1-207ENST00000488320 CYP17A1P05093 508 aa9.96□□□□□ -0.82
COL17A1-207ENST00000488320 MAPTP10636 758 aaKnown RBP9.96□□□□□ -0.82
COL17A1-207ENST00000488320 FDPSP14324 419 aaKnown RBP9.96□□□□□ -0.82
COL17A1-207ENST00000488320 GABRG2P18507 467 aa9.96□□□□□ -0.82
COL17A1-207ENST00000488320 MAOBP27338 520 aa9.96□□□□□ -0.82
COL17A1-207ENST00000488320 WASP42768 502 aa9.96□□□□□ -0.82
COL17A1-207ENST00000488320 DHCR24Q15392 516 aa9.96□□□□□ -0.82
COL17A1-207ENST00000488320 SAFBQ15424 915 aaKnown RBP eCLIP9.96□□□□□ -0.82
COL17A1-207ENST00000488320 CCDC157Q569K6 752 aa9.96□□□□□ -0.82
COL17A1-207ENST00000488320 WDR45BQ5MNZ6 344 aa9.96□□□□□ -0.82
COL17A1-207ENST00000488320 SDE2Q6IQ49 451 aa9.96□□□□□ -0.82
COL17A1-207ENST00000488320 NUDT18Q6ZVK8 323 aa9.96□□□□□ -0.82
COL17A1-207ENST00000488320 GLRX5Q86SX6 157 aa9.96□□□□□ -0.82
COL17A1-207ENST00000488320 SLC41A1Q8IVJ1 513 aa9.96□□□□□ -0.82
COL17A1-207ENST00000488320 PDCD7Q8N8D1 485 aaKnown RBP9.96□□□□□ -0.82
COL17A1-207ENST00000488320 ZNF513Q8N8E2 541 aaPredicted RBP9.96□□□□□ -0.82
COL17A1-207ENST00000488320 TMEM161BQ8NDZ6 487 aa9.96□□□□□ -0.82
COL17A1-207ENST00000488320 RHBDD1Q8TEB9 315 aa9.96□□□□□ -0.82
COL17A1-207ENST00000488320 SPIRE2Q8WWL2 714 aa9.96□□□□□ -0.82
COL17A1-207ENST00000488320 TRMT2BQ96GJ1 504 aaKnown RBP9.96□□□□□ -0.82
COL17A1-207ENST00000488320 RUSC1Q9BVN2 902 aa9.96□□□□□ -0.82
COL17A1-207ENST00000488320 TM6SF1Q9BZW5 370 aa9.96□□□□□ -0.82
COL17A1-207ENST00000488320 ZDHHC5Q9C0B5 715 aa9.96□□□□□ -0.82
COL17A1-207ENST00000488320 GCNT4Q9P109 453 aa9.96□□□□□ -0.82
COL17A1-207ENST00000488320 CALCOCO1Q9P1Z2 691 aa9.96□□□□□ -0.82
COL17A1-207ENST00000488320 PCOLCE2Q9UKZ9 415 aa9.96□□□□□ -0.82
COL17A1-207ENST00000488320 ARHGAP26Q9UNA1 814 aa9.96□□□□□ -0.82
COL17A1-207ENST00000488320 GOLGA4Q13439 2230 aaKnown RBP9.96□□□□□ -0.82
COL17A1-207ENST00000488320 APC2O95996 2303 aa9.96□□□□□ -0.82
COL17A1-207ENST00000488320 TSC2P49815 1807 aa9.96□□□□□ -0.82
COL17A1-207ENST00000488320 HELZP42694 1942 aaKnown RBP9.95□□□□□ -0.82
COL17A1-207ENST00000488320 IGHV1OR15-9A0A0B4J2B8 117 aa9.95□□□□□ -0.82
COL17A1-207ENST00000488320 ANO9A1A5B4 782 aa9.95□□□□□ -0.82
COL17A1-207ENST00000488320 H0YCG3 227 aa9.95□□□□□ -0.82
COL17A1-207ENST00000488320 J3QKU1 62 aa9.95□□□□□ -0.82
COL17A1-207ENST00000488320 OGTO15294 1046 aa9.95□□□□□ -0.82
COL17A1-207ENST00000488320 ADH1CP00326 375 aa9.95□□□□□ -0.82
COL17A1-207ENST00000488320 ABL1P00519 1130 aa9.95□□□□□ -0.82
COL17A1-207ENST00000488320 NFICP08651 508 aa9.95□□□□□ -0.82
COL17A1-207ENST00000488320 PLS3P13797 630 aa9.95□□□□□ -0.82
COL17A1-207ENST00000488320 HOXB2P14652 356 aa9.95□□□□□ -0.82
COL17A1-207ENST00000488320 TCF3P15923 654 aa9.95□□□□□ -0.82
COL17A1-207ENST00000488320 EIF2DP41214 584 aaKnown RBP9.95□□□□□ -0.82
COL17A1-207ENST00000488320 KIR2DL1P43626 348 aaPredicted RBP9.95□□□□□ -0.82
COL17A1-207ENST00000488320 GRIK2Q13002 908 aa9.95□□□□□ -0.82
COL17A1-207ENST00000488320 MAPK7Q13164 816 aa9.95□□□□□ -0.82
COL17A1-207ENST00000488320 ZRSR1Q15695 479 aaKnown RBP9.95□□□□□ -0.82
COL17A1-207ENST00000488320 GAB4Q2WGN9 574 aa9.95□□□□□ -0.82
COL17A1-207ENST00000488320 SV2CQ496J9 727 aa9.95□□□□□ -0.82
COL17A1-207ENST00000488320 PREPLQ4J6C6 727 aaPredicted RBP9.95□□□□□ -0.82
COL17A1-207ENST00000488320 KRT79Q5XKE5 535 aa9.95□□□□□ -0.82
COL17A1-207ENST00000488320 C1orf186Q6ZWK4 172 aa9.95□□□□□ -0.82
COL17A1-207ENST00000488320 SPATA2LQ8IUW3 424 aaPredicted RBP9.95□□□□□ -0.82
COL17A1-207ENST00000488320 ZNF843Q8N446 348 aa9.95□□□□□ -0.82
COL17A1-207ENST00000488320 NAT16Q8N8M0 369 aa9.95□□□□□ -0.82
COL17A1-207ENST00000488320 FOXJ1Q92949 421 aa9.95□□□□□ -0.82
COL17A1-207ENST00000488320 ERLEC1Q96DZ1 483 aa9.95□□□□□ -0.82
COL17A1-207ENST00000488320 MYRFLQ96LU7 910 aa9.95□□□□□ -0.82
COL17A1-207ENST00000488320 CDC6Q99741 560 aa9.95□□□□□ -0.82
COL17A1-207ENST00000488320 MSTO1Q9BUK6 570 aa9.95□□□□□ -0.82
COL17A1-207ENST00000488320 TIPINQ9BVW5 301 aa9.95□□□□□ -0.82
COL17A1-207ENST00000488320 RAB34Q9BZG1 259 aa9.95□□□□□ -0.82
COL17A1-207ENST00000488320 DPP3Q9NY33 737 aa9.95□□□□□ -0.82
COL17A1-207ENST00000488320 TRPM5Q9NZQ8 1165 aa9.95□□□□□ -0.82
COL17A1-207ENST00000488320 A0A0A0MRY4 1105 aa9.94□□□□□ -0.82
COL17A1-207ENST00000488320 FAM149AA5PLN7 773 aa9.94□□□□□ -0.82
COL17A1-207ENST00000488320 MEI4A8MW99 385 aa9.94□□□□□ -0.82
COL17A1-207ENST00000488320 KPNA7A9QM74 516 aa9.94□□□□□ -0.82
COL17A1-207ENST00000488320 SCAMP3O14828 347 aaKnown RBP9.94□□□□□ -0.82
COL17A1-207ENST00000488320 HNRNPDLO14979 420 aaKnown RBP9.94□□□□□ -0.82
COL17A1-207ENST00000488320 CBFA2T3O75081 653 aa9.94□□□□□ -0.82
COL17A1-207ENST00000488320 ADRB2P07550 413 aa9.94□□□□□ -0.82
COL17A1-207ENST00000488320 ATXN1LP0C7T5 689 aaKnown RBP9.94□□□□□ -0.82
COL17A1-207ENST00000488320 ADH5P11766 374 aa9.94□□□□□ -0.82
COL17A1-207ENST00000488320 ITPKBP27987 946 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms