RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 MAN2B1O00754 1011 aa25.21■■□□□ 1.63
RNF38-208ENST00000488058 CKMP06732 381 aa25.21■■□□□ 1.63
RNF38-208ENST00000488058 CCDC130P13994 396 aa25.21■■□□□ 1.63
RNF38-208ENST00000488058 GLULP15104 373 aa25.21■■□□□ 1.63
RNF38-208ENST00000488058 CD58P19256 250 aa25.21■■□□□ 1.63
RNF38-208ENST00000488058 TRIM21P19474 475 aaKnown RBP25.21■■□□□ 1.63
RNF38-208ENST00000488058 PPP1R2P41236 205 aa25.21■■□□□ 1.63
RNF38-208ENST00000488058 ALYREFQ86V81 257 aaKnown RBP25.21■■□□□ 1.63
RNF38-208ENST00000488058 UNC93AQ86WB7 457 aa25.21■■□□□ 1.63
RNF38-208ENST00000488058 FAM3CQ92520 227 aa25.21■■□□□ 1.63
RNF38-208ENST00000488058 USP13Q92995 863 aaPredicted RBP25.21■■□□□ 1.63
RNF38-208ENST00000488058 FAM49BQ9NUQ9 324 aa25.21■■□□□ 1.63
RNF38-208ENST00000488058 DLGAP2Q9P1A6 1054 aa25.21■■□□□ 1.63
RNF38-208ENST00000488058 CTNND2Q9UQB3 1225 aa25.21■■□□□ 1.63
RNF38-208ENST00000488058 TRAV19A0A0A6YYK7 116 aa25.2■■□□□ 1.62
RNF38-208ENST00000488058 ARNTLO00327 626 aa25.2■■□□□ 1.62
RNF38-208ENST00000488058 ABL1P00519 1130 aa25.2■■□□□ 1.62
RNF38-208ENST00000488058 ZC3H3Q8IXZ2 948 aaKnown RBP25.2■■□□□ 1.62
RNF38-208ENST00000488058 ARL14EPQ8N8R7 260 aaPredicted RBP25.2■■□□□ 1.62
RNF38-208ENST00000488058 FBXL13Q8NEE6 735 aa25.2■■□□□ 1.62
RNF38-208ENST00000488058 NELFBQ8WX92 580 aa25.2■■□□□ 1.62
RNF38-208ENST00000488058 SEMA4DQ92854 862 aa25.2■■□□□ 1.62
RNF38-208ENST00000488058 SMARCD1Q96GM5 515 aa25.2■■□□□ 1.62
RNF38-208ENST00000488058 CYP2S1Q96SQ9 504 aa25.2■■□□□ 1.62
RNF38-208ENST00000488058 KCNK16Q96T55 309 aa25.2■■□□□ 1.62
RNF38-208ENST00000488058 NELL2Q99435 816 aa25.2■■□□□ 1.62
RNF38-208ENST00000488058 KIF9Q9HAQ2 790 aa25.2■■□□□ 1.62
RNF38-208ENST00000488058 KRT82Q9NSB4 513 aa25.2■■□□□ 1.62
RNF38-208ENST00000488058 TRPM5Q9NZQ8 1165 aa25.2■■□□□ 1.62
RNF38-208ENST00000488058 MYH10P35580 1976 aa25.2■■□□□ 1.62
RNF38-208ENST00000488058 C2orf78A6NCI8 922 aa25.19■■□□□ 1.62
RNF38-208ENST00000488058 SOBPA7XYQ1 873 aa25.19■■□□□ 1.62
RNF38-208ENST00000488058 NCAM2O15394 837 aa25.19■■□□□ 1.62
RNF38-208ENST00000488058 USP17L7P0C7H9 530 aa25.19■■□□□ 1.62
RNF38-208ENST00000488058 SOX9P48436 509 aa25.19■■□□□ 1.62
RNF38-208ENST00000488058 MORC3Q14149 939 aa25.19■■□□□ 1.62
RNF38-208ENST00000488058 SLC2A14Q8TDB8 520 aa25.19■■□□□ 1.62
RNF38-208ENST00000488058 TWNKQ96RR1 684 aa25.19■■□□□ 1.62
RNF38-208ENST00000488058 SLC22A12Q96S37 553 aa25.19■■□□□ 1.62
RNF38-208ENST00000488058 OSBPL6Q9BZF3 934 aa25.19■■□□□ 1.62
RNF38-208ENST00000488058 CYP3A43Q9HB55 503 aa25.19■■□□□ 1.62
RNF38-208ENST00000488058 DMAP1Q9NPF5 467 aaPredicted RBP25.19■■□□□ 1.62
RNF38-208ENST00000488058 RAB20Q9NX57 234 aa25.19■■□□□ 1.62
RNF38-208ENST00000488058 GTSE1Q9NYZ3 720 aa25.19■■□□□ 1.62
RNF38-208ENST00000488058 ARMCX3Q9UH62 379 aaPredicted RBP25.19■■□□□ 1.62
RNF38-208ENST00000488058 KIF26AQ9ULI4 1882 aaPredicted RBP25.19■■□□□ 1.62
RNF38-208ENST00000488058 SHISA7A6NL88 538 aa25.18■■□□□ 1.62
RNF38-208ENST00000488058 AP1G2O75843 785 aa25.18■■□□□ 1.62
RNF38-208ENST00000488058 BMP6P22004 513 aa25.18■■□□□ 1.62
RNF38-208ENST00000488058 ADORA2BP29275 332 aa25.18■■□□□ 1.62
RNF38-208ENST00000488058 PLCB2Q00722 1185 aa25.18■■□□□ 1.62
RNF38-208ENST00000488058 TNK2Q07912 1038 aa25.18■■□□□ 1.62
RNF38-208ENST00000488058 CAMK4Q16566 473 aa25.18■■□□□ 1.62
RNF38-208ENST00000488058 CCDC40Q4G0X9 1142 aa25.18■■□□□ 1.62
RNF38-208ENST00000488058 CC2D1AQ6P1N0 951 aaPredicted RBP25.18■■□□□ 1.62
RNF38-208ENST00000488058 PAQR9Q6ZVX9 377 aa25.18■■□□□ 1.62
RNF38-208ENST00000488058 FUKQ8N0W3 1084 aa25.18■■□□□ 1.62
RNF38-208ENST00000488058 NUP93Q8N1F7 819 aa25.18■■□□□ 1.62
RNF38-208ENST00000488058 C12orf29Q8N999 325 aa25.18■■□□□ 1.62
RNF38-208ENST00000488058 TTLL2Q9BWV7 592 aa25.18■■□□□ 1.62
RNF38-208ENST00000488058 GKN1Q9NS71 199 aa25.18■■□□□ 1.62
RNF38-208ENST00000488058 SPATA6Q9NWH7 488 aaPredicted RBP25.18■■□□□ 1.62
RNF38-208ENST00000488058 WDFY4Q6ZS81 3184 aa25.18■■□□□ 1.62
RNF38-208ENST00000488058 PPP1R3GB7ZBB8 358 aa25.17■■□□□ 1.62
RNF38-208ENST00000488058 HDCP19113 662 aa25.17■■□□□ 1.62
RNF38-208ENST00000488058 STX17P56962 302 aa25.17■■□□□ 1.62
RNF38-208ENST00000488058 INCA1Q0VD86 236 aa25.17■■□□□ 1.62
RNF38-208ENST00000488058 TAF10Q12962 218 aa25.17■■□□□ 1.62
RNF38-208ENST00000488058 CBWD6Q4V339 395 aa25.17■■□□□ 1.62
RNF38-208ENST00000488058 WDR44Q5JSH3 913 aa25.17■■□□□ 1.62
RNF38-208ENST00000488058 CBWD3Q5JTY5 395 aa25.17■■□□□ 1.62
RNF38-208ENST00000488058 CBWD5Q5RIA9 395 aa25.17■■□□□ 1.62
RNF38-208ENST00000488058 CRYBG2Q8N1P7 616 aa25.17■■□□□ 1.62
RNF38-208ENST00000488058 SLITRK1Q96PX8 696 aa25.17■■□□□ 1.62
RNF38-208ENST00000488058 NT5C1AQ9BXI3 368 aa25.17■■□□□ 1.62
RNF38-208ENST00000488058 HELZP42694 1942 aaKnown RBP25.16■■□□□ 1.62
RNF38-208ENST00000488058 BICDL2A1A5D9 508 aa25.16■■□□□ 1.62
RNF38-208ENST00000488058 YWHAQP27348 245 aa25.16■■□□□ 1.62
RNF38-208ENST00000488058 MRE11P49959 708 aa25.16■■□□□ 1.62
RNF38-208ENST00000488058 MCCD1P59942 119 aaPredicted RBP25.16■■□□□ 1.62
RNF38-208ENST00000488058 ZNF268Q14587 947 aaPredicted RBP25.16■■□□□ 1.62
RNF38-208ENST00000488058 ZNF394Q53GI3 561 aa25.16■■□□□ 1.62
RNF38-208ENST00000488058 TRIM68Q6AZZ1 485 aa25.16■■□□□ 1.62
RNF38-208ENST00000488058 C1orf210Q8IVY1 113 aa25.16■■□□□ 1.62
RNF38-208ENST00000488058 RIN3Q8TB24 985 aa25.16■■□□□ 1.62
RNF38-208ENST00000488058 FBXO32Q969P5 355 aa25.16■■□□□ 1.62
RNF38-208ENST00000488058 CEP63Q96MT8 703 aa25.16■■□□□ 1.62
RNF38-208ENST00000488058 DUSP9Q99956 384 aaKnown RBP25.16■■□□□ 1.62
RNF38-208ENST00000488058 C8orf33Q9H7E9 229 aaPredicted RBP25.16■■□□□ 1.62
RNF38-208ENST00000488058 GCNT4Q9P109 453 aa25.16■■□□□ 1.62
RNF38-208ENST00000488058 SPECC1L-ADORA2AF8WAN1 911 aa25.15■■□□□ 1.62
RNF38-208ENST00000488058 CILPO75339 1184 aa25.15■■□□□ 1.62
RNF38-208ENST00000488058 RTN3O95197 1032 aaPredicted RBP25.15■■□□□ 1.62
RNF38-208ENST00000488058 HOXD11P31277 338 aaPredicted RBP25.15■■□□□ 1.62
RNF38-208ENST00000488058 PDE6CP51160 858 aa25.15■■□□□ 1.62
RNF38-208ENST00000488058 MAP3K7CLP57077 242 aa25.15■■□□□ 1.62
RNF38-208ENST00000488058 MTF1Q14872 753 aa25.15■■□□□ 1.62
RNF38-208ENST00000488058 ITPRIPL2Q3MIP1 535 aa25.15■■□□□ 1.62
RNF38-208ENST00000488058 TTI2Q6NXR4 508 aa25.15■■□□□ 1.62
RNF38-208ENST00000488058 FILIP1Q7Z7B0 1213 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms