RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 PAQR9Q6ZVX9 377 aa12.18□□□□□ -0.46
SPEN-205ENST00000487496 ACOT1Q86TX2 421 aa12.18□□□□□ -0.46
SPEN-205ENST00000487496 ADSSL1Q8N142 457 aa12.18□□□□□ -0.46
SPEN-205ENST00000487496 CRYBG2Q8N1P7 616 aa12.18□□□□□ -0.46
SPEN-205ENST00000487496 ARL14EPQ8N8R7 260 aaPredicted RBP12.18□□□□□ -0.46
SPEN-205ENST00000487496 RIN3Q8TB24 985 aa12.18□□□□□ -0.46
SPEN-205ENST00000487496 MSANTD3Q96H12 275 aa12.18□□□□□ -0.46
SPEN-205ENST00000487496 FAM83CQ9BQN1 747 aa12.18□□□□□ -0.46
SPEN-205ENST00000487496 APOBEC3GQ9HC16 384 aaKnown RBP12.18□□□□□ -0.46
SPEN-205ENST00000487496 TMEM8AQ9HCN3 771 aa12.18□□□□□ -0.46
SPEN-205ENST00000487496 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.18□□□□□ -0.463e-10■■■■■ 57.7
SPEN-205ENST00000487496 GKN1Q9NS71 199 aa12.18□□□□□ -0.46
SPEN-205ENST00000487496 GCNT4Q9P109 453 aa12.18□□□□□ -0.46
SPEN-205ENST00000487496 NUP210Q8TEM1 1887 aaPredicted RBP12.18□□□□□ -0.46
SPEN-205ENST00000487496 C2orf78A6NCI8 922 aa12.17□□□□□ -0.46
SPEN-205ENST00000487496 ZNF840PA6NDX5 716 aa12.17□□□□□ -0.46
SPEN-205ENST00000487496 SPECC1L-ADORA2AF8WAN1 911 aa12.17□□□□□ -0.46
SPEN-205ENST00000487496 LAMTOR5O43504 91 aa12.17□□□□□ -0.46
SPEN-205ENST00000487496 CKMP06732 381 aa12.17□□□□□ -0.46
SPEN-205ENST00000487496 USP17L7P0C7H9 530 aa12.17□□□□□ -0.46
SPEN-205ENST00000487496 SP9P0CG40 484 aa12.17□□□□□ -0.46
SPEN-205ENST00000487496 EPB41P11171 864 aaKnown RBP12.17□□□□□ -0.46
SPEN-205ENST00000487496 CHRNB1P11230 501 aa12.17□□□□□ -0.46
SPEN-205ENST00000487496 HDCP19113 662 aa12.17□□□□□ -0.46
SPEN-205ENST00000487496 CTHP32929 405 aa12.17□□□□□ -0.46
SPEN-205ENST00000487496 NDST1P52848 882 aa12.17□□□□□ -0.46
SPEN-205ENST00000487496 FKBP3Q00688 224 aaKnown RBP12.17□□□□□ -0.46
SPEN-205ENST00000487496 ORC1Q13415 861 aa12.17□□□□□ -0.46
SPEN-205ENST00000487496 KRT39Q6A163 491 aa12.17□□□□□ -0.46
SPEN-205ENST00000487496 ANKRD40Q6AI12 368 aa12.17□□□□□ -0.46
SPEN-205ENST00000487496 ISM2Q6H9L7 571 aa12.17□□□□□ -0.46
SPEN-205ENST00000487496 TXNDC11Q6PKC3 985 aa12.17□□□□□ -0.46
SPEN-205ENST00000487496 FAM35AQ86V20 835 aa12.17□□□□□ -0.46
SPEN-205ENST00000487496 UNC93AQ86WB7 457 aa12.17□□□□□ -0.46
SPEN-205ENST00000487496 RALGPS2Q86X27 583 aaPredicted RBP12.17□□□□□ -0.46
SPEN-205ENST00000487496 ZC3H3Q8IXZ2 948 aaKnown RBP12.17□□□□□ -0.46
SPEN-205ENST00000487496 FUKQ8N0W3 1084 aa12.17□□□□□ -0.46
SPEN-205ENST00000487496 NUP93Q8N1F7 819 aa12.17□□□□□ -0.46
SPEN-205ENST00000487496 KCNK16Q96T55 309 aa12.17□□□□□ -0.46
SPEN-205ENST00000487496 TSG101Q99816 390 aa12.17□□□□□ -0.46
SPEN-205ENST00000487496 MED10Q9BTT4 135 aa12.17□□□□□ -0.46
SPEN-205ENST00000487496 GTPBP4Q9BZE4 634 aaKnown RBP12.17□□□□□ -0.46
SPEN-205ENST00000487496 IMPG2Q9BZV3 1241 aa12.17□□□□□ -0.46
SPEN-205ENST00000487496 LMAN1LQ9HAT1 526 aa12.17□□□□□ -0.46
SPEN-205ENST00000487496 HPS4Q9NQG7 708 aa12.17□□□□□ -0.46
SPEN-205ENST00000487496 TRPM5Q9NZQ8 1165 aa12.17□□□□□ -0.46
SPEN-205ENST00000487496 HMGXB4Q9UGU5 601 aa12.17□□□□□ -0.46
SPEN-205ENST00000487496 MAN1B1Q9UKM7 699 aa12.17□□□□□ -0.46
SPEN-205ENST00000487496 TICRRQ7Z2Z1 1910 aa12.17□□□□□ -0.46
SPEN-205ENST00000487496 CACNA1IQ9P0X4 2223 aa12.17□□□□□ -0.46
SPEN-205ENST00000487496 ATP8B3O60423 1300 aa12.16□□□□□ -0.46
SPEN-205ENST00000487496 PTPRDP23468 1912 aa12.16□□□□□ -0.46
SPEN-205ENST00000487496 MIA3Q5JRA6 1907 aa12.16□□□□□ -0.46
SPEN-205ENST00000487496 DENND4CQ5VZ89 1909 aa12.16□□□□□ -0.46
SPEN-205ENST00000487496 TRIM49BA6NDI0 452 aa12.16□□□□□ -0.46
SPEN-205ENST00000487496 GFRA3O60609 400 aa12.16□□□□□ -0.46
SPEN-205ENST00000487496 CCDC130P13994 396 aa12.16□□□□□ -0.46
SPEN-205ENST00000487496 PFKLP17858 780 aa12.16□□□□□ -0.46
SPEN-205ENST00000487496 PPP3CCP48454 512 aa12.16□□□□□ -0.46
SPEN-205ENST00000487496 MXI1P50539 228 aa12.16□□□□□ -0.46
SPEN-205ENST00000487496 LRRC63Q05C16 580 aa12.16□□□□□ -0.46
SPEN-205ENST00000487496 INCA1Q0VD86 236 aa12.16□□□□□ -0.46
SPEN-205ENST00000487496 IFRD2Q12894 506 aaPredicted RBP12.16□□□□□ -0.46
SPEN-205ENST00000487496 TAF10Q12962 218 aa12.16□□□□□ -0.46
SPEN-205ENST00000487496 MTAPQ13126 283 aa12.16□□□□□ -0.46
SPEN-205ENST00000487496 RUNX3Q13761 415 aa12.16□□□□□ -0.46
SPEN-205ENST00000487496 ZNF77Q15935 545 aa12.16□□□□□ -0.46
SPEN-205ENST00000487496 ITPRIPL2Q3MIP1 535 aa12.16□□□□□ -0.46
SPEN-205ENST00000487496 TRIM68Q6AZZ1 485 aa12.16□□□□□ -0.46
SPEN-205ENST00000487496 CC2D1AQ6P1N0 951 aaPredicted RBP12.16□□□□□ -0.46
SPEN-205ENST00000487496 ASCL5Q7RTU5 278 aa12.16□□□□□ -0.46
SPEN-205ENST00000487496 C12orf29Q8N999 325 aa12.16□□□□□ -0.46
SPEN-205ENST00000487496 CCDC150Q8NCX0 1101 aa12.16□□□□□ -0.46
SPEN-205ENST00000487496 SLC2A14Q8TDB8 520 aa12.16□□□□□ -0.46
SPEN-205ENST00000487496 SEMA4DQ92854 862 aa12.16□□□□□ -0.46
SPEN-205ENST00000487496 NKD2Q969F2 451 aaPredicted RBP12.16□□□□□ -0.46
SPEN-205ENST00000487496 SMARCD1Q96GM5 515 aa12.16□□□□□ -0.46
SPEN-205ENST00000487496 TWNKQ96RR1 684 aa12.16□□□□□ -0.46
SPEN-205ENST00000487496 NIF3L1Q9GZT8 377 aa12.16□□□□□ -0.46
SPEN-205ENST00000487496 CHRDQ9H2X0 955 aa12.16□□□□□ -0.46
SPEN-205ENST00000487496 EBF3Q9H4W6 596 aa12.16□□□□□ -0.46
SPEN-205ENST00000487496 CYP3A43Q9HB55 503 aa12.16□□□□□ -0.46
SPEN-205ENST00000487496 FBXO4Q9UKT5 387 aa12.16□□□□□ -0.46
SPEN-205ENST00000487496 ARHGAP26Q9UNA1 814 aa12.16□□□□□ -0.46
SPEN-205ENST00000487496 R4GN57 208 aa12.16□□□□□ -0.46
SPEN-205ENST00000487496 OBSL1O75147 1896 aa12.15□□□□□ -0.46
SPEN-205ENST00000487496 OTOL1A6NHN0 477 aaPredicted RBP12.15□□□□□ -0.46
SPEN-205ENST00000487496 TNFRSF10BO14763 440 aa12.15□□□□□ -0.46
SPEN-205ENST00000487496 PSMA7O14818 248 aa12.15□□□□□ -0.46
SPEN-205ENST00000487496 SLC16A3O15427 465 aaKnown RBP12.15□□□□□ -0.46
SPEN-205ENST00000487496 STX10O60499 249 aa12.15□□□□□ -0.46
SPEN-205ENST00000487496 AP1G2O75843 785 aa12.15□□□□□ -0.46
SPEN-205ENST00000487496 RTN3O95197 1032 aaPredicted RBP12.15□□□□□ -0.46
SPEN-205ENST00000487496 ABL1P00519 1130 aa12.15□□□□□ -0.46
SPEN-205ENST00000487496 CD44P16070 742 aaKnown RBP12.15□□□□□ -0.46
SPEN-205ENST00000487496 YWHAQP27348 245 aa12.15□□□□□ -0.46
SPEN-205ENST00000487496 PDE6CP51160 858 aa12.15□□□□□ -0.46
SPEN-205ENST00000487496 CSTF1Q05048 431 aaKnown RBP12.15□□□□□ -0.46
SPEN-205ENST00000487496 STIM1Q13586 685 aa12.15□□□□□ -0.46
SPEN-205ENST00000487496 MTF1Q14872 753 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms