RNA–Protein interactions for RNA: ENST00000487427.5

ITSN1-229, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 805 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-229ENST00000487427 SPATA20Q8TB22 786 aa13.25□□□□□ -0.29
ITSN1-229ENST00000487427 CYP2S1Q96SQ9 504 aa13.25□□□□□ -0.29
ITSN1-229ENST00000487427 IER2Q9BTL4 223 aa13.25□□□□□ -0.29
ITSN1-229ENST00000487427 TTLL2Q9BWV7 592 aa13.25□□□□□ -0.29
ITSN1-229ENST00000487427 ZNF518BQ9C0D4 1074 aa13.25□□□□□ -0.29
ITSN1-229ENST00000487427 TRPC7Q9HCX4 862 aa13.25□□□□□ -0.29
ITSN1-229ENST00000487427 GTSE1Q9NYZ3 720 aa13.25□□□□□ -0.29
ITSN1-229ENST00000487427 TRPM5Q9NZQ8 1165 aa13.25□□□□□ -0.29
ITSN1-229ENST00000487427 PCDHA5Q9Y5H7 936 aa13.25□□□□□ -0.29
ITSN1-229ENST00000487427 TCHHQ07283 1943 aa13.25□□□□□ -0.29
ITSN1-229ENST00000487427 PTPRZ1P23471 2315 aaPredicted RBP13.24□□□□□ -0.29
ITSN1-229ENST00000487427 ATP8B3O60423 1300 aa13.24□□□□□ -0.29
ITSN1-229ENST00000487427 PRR23AA6NEV1 266 aa13.24□□□□□ -0.29
ITSN1-229ENST00000487427 CETN3O15182 167 aa13.24□□□□□ -0.29
ITSN1-229ENST00000487427 CHRNB1P11230 501 aa13.24□□□□□ -0.29
ITSN1-229ENST00000487427 PFKLP17858 780 aa13.24□□□□□ -0.29
ITSN1-229ENST00000487427 HDCP19113 662 aa13.24□□□□□ -0.29
ITSN1-229ENST00000487427 GTF2H1P32780 548 aa13.24□□□□□ -0.29
ITSN1-229ENST00000487427 CTHP32929 405 aa13.24□□□□□ -0.29
ITSN1-229ENST00000487427 PIK3CAP42336 1068 aa13.24□□□□□ -0.29
ITSN1-229ENST00000487427 RAP1GAPP47736 663 aa13.24□□□□□ -0.29
ITSN1-229ENST00000487427 SOX9P48436 509 aa13.24□□□□□ -0.29
ITSN1-229ENST00000487427 GCLMP48507 274 aa13.24□□□□□ -0.29
ITSN1-229ENST00000487427 PDE6CP51160 858 aa13.24□□□□□ -0.29
ITSN1-229ENST00000487427 CLCN6P51797 869 aa13.24□□□□□ -0.29
ITSN1-229ENST00000487427 USP46P62068 366 aa13.24□□□□□ -0.29
ITSN1-229ENST00000487427 TNK2Q07912 1038 aa13.24□□□□□ -0.29
ITSN1-229ENST00000487427 PPP3CAQ08209 521 aa13.24□□□□□ -0.29
ITSN1-229ENST00000487427 MTAPQ13126 283 aa13.24□□□□□ -0.29
ITSN1-229ENST00000487427 COBLL1Q53SF7 1204 aa13.24□□□□□ -0.29
ITSN1-229ENST00000487427 ZNF658Q5TYW1 1059 aaPredicted RBP13.24□□□□□ -0.29
ITSN1-229ENST00000487427 SCARA5Q6ZMJ2 495 aa13.24□□□□□ -0.29
ITSN1-229ENST00000487427 ASCL5Q7RTU5 278 aa13.24□□□□□ -0.29
ITSN1-229ENST00000487427 UNC93AQ86WB7 457 aa13.24□□□□□ -0.29
ITSN1-229ENST00000487427 EFCAB3Q8N7B9 438 aa13.24□□□□□ -0.29
ITSN1-229ENST00000487427 ARL14EPQ8N8R7 260 aaPredicted RBP13.24□□□□□ -0.29
ITSN1-229ENST00000487427 TTC8Q8TAM2 541 aa13.24□□□□□ -0.29
ITSN1-229ENST00000487427 SMARCE1Q969G3 411 aa13.24□□□□□ -0.29
ITSN1-229ENST00000487427 ELMO3Q96BJ8 720 aa13.24□□□□□ -0.29
ITSN1-229ENST00000487427 SLC22A12Q96S37 553 aa13.24□□□□□ -0.29
ITSN1-229ENST00000487427 IMPG2Q9BZV3 1241 aa13.24□□□□□ -0.29
ITSN1-229ENST00000487427 SDCBP2Q9H190 292 aa13.24□□□□□ -0.29
ITSN1-229ENST00000487427 CHRDQ9H2X0 955 aa13.24□□□□□ -0.29
ITSN1-229ENST00000487427 GCNT4Q9P109 453 aa13.24□□□□□ -0.29
ITSN1-229ENST00000487427 RIF1Q5UIP0 2472 aaKnown RBP13.23□□□□□ -0.29
ITSN1-229ENST00000487427 C2orf78A6NCI8 922 aa13.23□□□□□ -0.29
ITSN1-229ENST00000487427 ZNF840PA6NDX5 716 aa13.23□□□□□ -0.29
ITSN1-229ENST00000487427 CLDN5O00501 218 aa13.23□□□□□ -0.29
ITSN1-229ENST00000487427 CKMP06732 381 aa13.23□□□□□ -0.29
ITSN1-229ENST00000487427 TRIM49P0CI25 452 aa13.23□□□□□ -0.29
ITSN1-229ENST00000487427 TRIM49CP0CI26 452 aa13.23□□□□□ -0.29
ITSN1-229ENST00000487427 CACNA2D1P54289 1103 aa13.23□□□□□ -0.29
ITSN1-229ENST00000487427 CSTF1Q05048 431 aaKnown RBP13.23□□□□□ -0.29
ITSN1-229ENST00000487427 RUNX3Q13761 415 aa13.23□□□□□ -0.29
ITSN1-229ENST00000487427 LRRC32Q14392 662 aa13.23□□□□□ -0.29
ITSN1-229ENST00000487427 PDGFRLQ15198 375 aa13.23□□□□□ -0.29
ITSN1-229ENST00000487427 DGKKQ5KSL6 1271 aa13.23□□□□□ -0.29
ITSN1-229ENST00000487427 TXNDC11Q6PKC3 985 aa13.23□□□□□ -0.29
ITSN1-229ENST00000487427 PAQR9Q6ZVX9 377 aa13.23□□□□□ -0.29
ITSN1-229ENST00000487427 ACOT1Q86TX2 421 aa13.23□□□□□ -0.29
ITSN1-229ENST00000487427 NUP93Q8N1F7 819 aa13.23□□□□□ -0.29
ITSN1-229ENST00000487427 CCDC150Q8NCX0 1101 aa13.23□□□□□ -0.29
ITSN1-229ENST00000487427 EEF2KMTQ96G04 330 aa13.23□□□□□ -0.29
ITSN1-229ENST00000487427 SLITRK1Q96PX8 696 aa13.23□□□□□ -0.29
ITSN1-229ENST00000487427 MED10Q9BTT4 135 aa13.23□□□□□ -0.29
ITSN1-229ENST00000487427 CYP3A43Q9HB55 503 aa13.23□□□□□ -0.29
ITSN1-229ENST00000487427 TMEM8AQ9HCN3 771 aa13.23□□□□□ -0.29
ITSN1-229ENST00000487427 TMEM30AQ9NV96 361 aa13.23□□□□□ -0.29
ITSN1-229ENST00000487427 R4GN57 208 aa13.23□□□□□ -0.29
ITSN1-229ENST00000487427 CACNA1IQ9P0X4 2223 aa13.23□□□□□ -0.29
ITSN1-229ENST00000487427 COL4A3Q01955 1670 aa13.22□□□□□ -0.29
ITSN1-229ENST00000487427 STX10O60499 249 aa13.22□□□□□ -0.29
ITSN1-229ENST00000487427 RTN3O95197 1032 aaPredicted RBP13.22□□□□□ -0.29
ITSN1-229ENST00000487427 EPB41P11171 864 aaKnown RBP13.22□□□□□ -0.29
ITSN1-229ENST00000487427 TCF3P15923 654 aa13.22□□□□□ -0.29
ITSN1-229ENST00000487427 TRIM21P19474 475 aaKnown RBP13.22□□□□□ -0.29
ITSN1-229ENST00000487427 YWHAQP27348 245 aa13.22□□□□□ -0.29
ITSN1-229ENST00000487427 TIE1P35590 1138 aa13.22□□□□□ -0.29
ITSN1-229ENST00000487427 ASPAP45381 313 aa13.22□□□□□ -0.29
ITSN1-229ENST00000487427 NDST1P52848 882 aa13.22□□□□□ -0.29
ITSN1-229ENST00000487427 FKBP3Q00688 224 aaKnown RBP13.22□□□□□ -0.29
ITSN1-229ENST00000487427 AMPD2Q01433 879 aa13.22□□□□□ -0.29
ITSN1-229ENST00000487427 TAF10Q12962 218 aa13.22□□□□□ -0.29
ITSN1-229ENST00000487427 PPP2R5DQ14738 602 aa13.22□□□□□ -0.29
ITSN1-229ENST00000487427 KRT39Q6A163 491 aa13.22□□□□□ -0.29
ITSN1-229ENST00000487427 SPOPLQ6IQ16 392 aa13.22□□□□□ -0.29
ITSN1-229ENST00000487427 FAM35AQ86V20 835 aa13.22□□□□□ -0.29
ITSN1-229ENST00000487427 FUKQ8N0W3 1084 aa13.22□□□□□ -0.29
ITSN1-229ENST00000487427 TAS1R2Q8TE23 839 aa13.22□□□□□ -0.29
ITSN1-229ENST00000487427 ATRIPQ8WXE1 791 aa13.22□□□□□ -0.29
ITSN1-229ENST00000487427 SMARCD1Q96GM5 515 aa13.22□□□□□ -0.29
ITSN1-229ENST00000487427 KCNK16Q96T55 309 aa13.22□□□□□ -0.29
ITSN1-229ENST00000487427 TSG101Q99816 390 aa13.22□□□□□ -0.29
ITSN1-229ENST00000487427 MFRPQ9BY79 579 aa13.22□□□□□ -0.29
ITSN1-229ENST00000487427 FAM126AQ9BYI3 521 aaPredicted RBP13.22□□□□□ -0.29
ITSN1-229ENST00000487427 EBF3Q9H4W6 596 aa13.22□□□□□ -0.29
ITSN1-229ENST00000487427 HPS4Q9NQG7 708 aa13.22□□□□□ -0.29
ITSN1-229ENST00000487427 PRMT8Q9NR22 394 aaPredicted RBP13.22□□□□□ -0.29
ITSN1-229ENST00000487427 ARHGAP26Q9UNA1 814 aa13.22□□□□□ -0.29
ITSN1-229ENST00000487427 OTOL1A6NHN0 477 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms