RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 TLN1Q9Y490 2541 aaKnown RBP12.63□□□□□ -0.39
TRIM56-204ENST00000487252 MYOFQ9NZM1 2061 aa12.63□□□□□ -0.39
TRIM56-204ENST00000487252 C2CD3Q4AC94 2353 aa12.63□□□□□ -0.39
TRIM56-204ENST00000487252 CLEC18AA5D8T8 446 aa12.63□□□□□ -0.39
TRIM56-204ENST00000487252 ABLIM1O14639 778 aa12.63□□□□□ -0.39
TRIM56-204ENST00000487252 BCAT2O15382 392 aaPredicted RBP12.63□□□□□ -0.39
TRIM56-204ENST00000487252 CDC45O75419 566 aa12.63□□□□□ -0.39
TRIM56-204ENST00000487252 KRT10P13645 584 aa12.63□□□□□ -0.39
TRIM56-204ENST00000487252 GCFC2P16383 781 aaKnown RBP12.63□□□□□ -0.39
TRIM56-204ENST00000487252 PROZP22891 400 aa12.63□□□□□ -0.39
TRIM56-204ENST00000487252 CLDN6P56747 220 aa12.63□□□□□ -0.39
TRIM56-204ENST00000487252 NLRP5P59047 1200 aa12.63□□□□□ -0.39
TRIM56-204ENST00000487252 UBAP2LQ14157 1087 aaKnown RBP12.63□□□□□ -0.39
TRIM56-204ENST00000487252 ZBTB6Q15916 424 aa12.63□□□□□ -0.39
TRIM56-204ENST00000487252 INF2Q27J81 1249 aa12.63□□□□□ -0.39
TRIM56-204ENST00000487252 SLC39A12Q504Y0 691 aa12.63□□□□□ -0.39
TRIM56-204ENST00000487252 CLEC18BQ6UXF7 455 aa12.63□□□□□ -0.39
TRIM56-204ENST00000487252 C12orf40Q86WS4 652 aa12.63□□□□□ -0.39
TRIM56-204ENST00000487252 ZCCHC9Q8N567 271 aaKnown RBP12.63□□□□□ -0.39
TRIM56-204ENST00000487252 CLEC18CQ8NCF0 446 aa12.63□□□□□ -0.39
TRIM56-204ENST00000487252 ZNF248Q8NDW4 579 aa12.63□□□□□ -0.39
TRIM56-204ENST00000487252 PIGOQ8TEQ8 1089 aa12.63□□□□□ -0.39
TRIM56-204ENST00000487252 LRRC15Q8TF66 581 aa12.63□□□□□ -0.39
TRIM56-204ENST00000487252 HIC2Q96JB3 615 aa12.63□□□□□ -0.39
TRIM56-204ENST00000487252 MYRFLQ96LU7 910 aa12.63□□□□□ -0.39
TRIM56-204ENST00000487252 NACC1Q96RE7 527 aa12.63□□□□□ -0.39
TRIM56-204ENST00000487252 ACO2Q99798 780 aaKnown RBP12.63□□□□□ -0.39
TRIM56-204ENST00000487252 CD93Q9NPY3 652 aa12.63□□□□□ -0.39
TRIM56-204ENST00000487252 ARHGAP26Q9UNA1 814 aa12.63□□□□□ -0.39
TRIM56-204ENST00000487252 PAPSS1O43252 624 aaPredicted RBP12.62□□□□□ -0.39
TRIM56-204ENST00000487252 NDUFS2O75306 463 aa12.62□□□□□ -0.39
TRIM56-204ENST00000487252 CKMP06732 381 aa12.62□□□□□ -0.39
TRIM56-204ENST00000487252 C1SP09871 688 aa12.62□□□□□ -0.39
TRIM56-204ENST00000487252 LIG1P18858 919 aa12.62□□□□□ -0.39
TRIM56-204ENST00000487252 SMARCB1Q12824 385 aa12.62□□□□□ -0.39
TRIM56-204ENST00000487252 SLC10A6Q3KNW5 377 aa12.62□□□□□ -0.39
TRIM56-204ENST00000487252 ZC2HC1CQ53FD0 456 aaPredicted RBP12.62□□□□□ -0.39
TRIM56-204ENST00000487252 CCDC157Q569K6 752 aa12.62□□□□□ -0.39
TRIM56-204ENST00000487252 USP49Q70CQ1 688 aa12.62□□□□□ -0.39
TRIM56-204ENST00000487252 DHX32Q7L7V1 743 aaKnown RBP12.62□□□□□ -0.39
TRIM56-204ENST00000487252 TRMT11Q7Z4G4 463 aaKnown RBP12.62□□□□□ -0.39
TRIM56-204ENST00000487252 BLIDQ8IZY5 108 aa12.62□□□□□ -0.39
TRIM56-204ENST00000487252 CACTIN-AS1Q8N1I8 211 aa12.62□□□□□ -0.39
TRIM56-204ENST00000487252 CADM4Q8NFZ8 388 aa12.62□□□□□ -0.39
TRIM56-204ENST00000487252 DEPTORQ8TB45 409 aa12.62□□□□□ -0.39
TRIM56-204ENST00000487252 SPPL2BQ8TCT7 592 aa12.62□□□□□ -0.39
TRIM56-204ENST00000487252 TRMT2BQ96GJ1 504 aaKnown RBP12.62□□□□□ -0.39
TRIM56-204ENST00000487252 LGMNQ99538 433 aa12.62□□□□□ -0.39
TRIM56-204ENST00000487252 KIFC3Q9BVG8 833 aa12.62□□□□□ -0.39
TRIM56-204ENST00000487252 ARHGEF4Q9NR80 690 aa12.62□□□□□ -0.39
TRIM56-204ENST00000487252 A0A087WWV3 80 aa12.61□□□□□ -0.39
TRIM56-204ENST00000487252 TRAV19A0A0A6YYK7 116 aa12.61□□□□□ -0.39
TRIM56-204ENST00000487252 AFPP02771 609 aaKnown RBP12.61□□□□□ -0.39
TRIM56-204ENST00000487252 CYP11A1P05108 521 aa12.61□□□□□ -0.39
TRIM56-204ENST00000487252 CSH1P0DML2 217 aa12.61□□□□□ -0.39
TRIM56-204ENST00000487252 CSH2P0DML3 217 aa12.61□□□□□ -0.39
TRIM56-204ENST00000487252 MCF2P10911 925 aa12.61□□□□□ -0.39
TRIM56-204ENST00000487252 HOXB2P14652 356 aa12.61□□□□□ -0.39
TRIM56-204ENST00000487252 ATP2B1P20020 1258 aa12.61□□□□□ -0.39
TRIM56-204ENST00000487252 CR2P20023 1033 aa12.61□□□□□ -0.39
TRIM56-204ENST00000487252 DHCR24Q15392 516 aa12.61□□□□□ -0.39
TRIM56-204ENST00000487252 ZNF568Q3ZCX4 644 aa12.61□□□□□ -0.39
TRIM56-204ENST00000487252 C4orf17Q53FE4 359 aa12.61□□□□□ -0.39
TRIM56-204ENST00000487252 FBXL19Q6PCT2 694 aa12.61□□□□□ -0.39
TRIM56-204ENST00000487252 LRRTM3Q86VH5 581 aa12.61□□□□□ -0.39
TRIM56-204ENST00000487252 ENGASEQ8NFI3 743 aa12.61□□□□□ -0.39
TRIM56-204ENST00000487252 TSC1Q92574 1164 aa12.61□□□□□ -0.39
TRIM56-204ENST00000487252 SNX21Q969T3 373 aa12.61□□□□□ -0.39
TRIM56-204ENST00000487252 CCDC43Q96MW1 224 aaKnown RBP12.61□□□□□ -0.39
TRIM56-204ENST00000487252 HSPBP1Q9NZL4 362 aa12.61□□□□□ -0.39
TRIM56-204ENST00000487252 NOL4O94818 638 aa12.6□□□□□ -0.39
TRIM56-204ENST00000487252 IFNAR1P17181 557 aa12.6□□□□□ -0.39
TRIM56-204ENST00000487252 CYP3A5P20815 502 aa12.6□□□□□ -0.39
TRIM56-204ENST00000487252 CD6P30203 668 aa12.6□□□□□ -0.39
TRIM56-204ENST00000487252 NTSR1P30989 418 aa12.6□□□□□ -0.39
TRIM56-204ENST00000487252 AKAP17AQ02040 695 aaKnown RBP12.6□□□□□ -0.39
TRIM56-204ENST00000487252 VAC14Q08AM6 782 aa12.6□□□□□ -0.39
TRIM56-204ENST00000487252 RESTQ13127 1097 aa12.6□□□□□ -0.39
TRIM56-204ENST00000487252 PPP2R5AQ15172 486 aa12.6□□□□□ -0.39
TRIM56-204ENST00000487252 SF3A1Q15459 793 aaKnown RBP12.6□□□□□ -0.39
TRIM56-204ENST00000487252 HES3Q5TGS1 186 aa12.6□□□□□ -0.39
TRIM56-204ENST00000487252 BROXQ5VW32 411 aa12.6□□□□□ -0.39
TRIM56-204ENST00000487252 RHBDF2Q6PJF5 856 aa12.6□□□□□ -0.39
TRIM56-204ENST00000487252 DSTYKQ6XUX3 929 aa12.6□□□□□ -0.39
TRIM56-204ENST00000487252 METTL3Q86U44 580 aaKnown RBP12.6□□□□□ -0.39
TRIM56-204ENST00000487252 MIB1Q86YT6 1006 aa12.6□□□□□ -0.39
TRIM56-204ENST00000487252 SLFN12Q8IYM2 578 aa12.6□□□□□ -0.39
TRIM56-204ENST00000487252 ARL14EPQ8N8R7 260 aaPredicted RBP12.6□□□□□ -0.39
TRIM56-204ENST00000487252 IPO4Q8TEX9 1081 aaKnown RBP12.6□□□□□ -0.39
TRIM56-204ENST00000487252 MRGPRX1Q96LB2 322 aa12.6□□□□□ -0.39
TRIM56-204ENST00000487252 TTC12Q9H892 705 aaPredicted RBP12.6□□□□□ -0.39
TRIM56-204ENST00000487252 WSB2Q9NYS7 404 aaPredicted RBP12.6□□□□□ -0.39
TRIM56-204ENST00000487252 UXTQ9UBK9 157 aaPredicted RBP12.6□□□□□ -0.39
TRIM56-204ENST00000487252 FTSJ1Q9UET6 329 aa12.6□□□□□ -0.39
TRIM56-204ENST00000487252 STARD13Q9Y3M8 1113 aa12.6□□□□□ -0.39
TRIM56-204ENST00000487252 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.6□□□□□ -0.39
TRIM56-204ENST00000487252 A0A1B0GVT2 93 aa12.59□□□□□ -0.39
TRIM56-204ENST00000487252 C2orf78A6NCI8 922 aa12.59□□□□□ -0.39
TRIM56-204ENST00000487252 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.59□□□□□ -0.39
TRIM56-204ENST00000487252 SUV39H1O43463 412 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms