RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 ENTPD2Q9Y5L3 495 aa4.29□□□□□ -1.72
SNRNP27-204ENST00000487029 LOC102724159A0A0B4J2E5 919 aa4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 MBD3L4A6NDZ8 208 aaPredicted RBP4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 MBD3L3A6NE82 208 aaPredicted RBP4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 PYCARD-AS1I3L0S3 204 aa4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 MYO1CO00159 1063 aa4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 APOL1O14791 398 aa4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 NCK2O43639 380 aa4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 KIF20AO95235 890 aa4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 PRKCGP05129 697 aa4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 IGKV2-30P06310 120 aa4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 FCER1AP12319 257 aa4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 GPD1P21695 349 aa4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 FOLR3P41439 243 aa4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 MAPK10P53779 464 aa4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 UCP3P55916 312 aa4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 HTRA4P83105 476 aaPredicted RBP4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 PIGFQ07326 219 aa4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 EIF2B5Q13144 721 aaKnown RBP4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 PWP2Q15269 919 aaKnown RBP4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 SF3B3Q15393 1217 aaKnown RBP4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 KLHL22Q53GT1 634 aa4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 FAM160B1Q5W0V3 765 aa4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 KIAA0895LQ68EN5 471 aa4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 PPP1R32Q7Z5V6 425 aa4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 AMIGO2Q86SJ2 522 aa4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 CFAP52Q8N1V2 620 aa4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 MPP5Q8N3R9 675 aa4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 SLC15A4Q8N697 577 aa4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 RNF152Q8N8N0 203 aa4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 FAM46DQ8NEK8 389 aa4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 VPS37AQ8NEZ2 397 aa4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 BRI3BPQ8WY22 251 aa4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 KIAA1191Q96A73 305 aa4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 MARS2Q96GW9 593 aaKnown RBP4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 PNKPQ96T60 521 aa4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 A1CFQ9NQ94 594 aaKnown RBP4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 TRMT13Q9NUP7 481 aaKnown RBP4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 ADAM21Q9UKJ8 722 aa4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 CDYLQ9Y232 598 aa4.28□□□□□ -1.72
SNRNP27-204ENST00000487029 A0A1W2PPC4 97 aa4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 POLRMTO00411 1230 aaKnown RBP4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 PEX1O43933 1283 aa4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 FGF18O76093 207 aa4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 ANXA2P07355 339 aaKnown RBP4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 KLRC1P26715 233 aa4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 VIPR2P41587 438 aa4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 ZNF844Q08AG5 666 aa4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 CHAF1AQ13111 956 aaPredicted RBP4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 STK3Q13188 491 aa4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 PMS2P11Q13670 270 aa4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 KLF9Q13886 244 aaPredicted RBP4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 KRT72Q14CN4 511 aa4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 GRAMD1BQ3KR37 738 aa4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 FAM83BQ5T0W9 1011 aa4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 TSTD2Q5T7W7 516 aa4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 KLHDC7AQ5VTJ3 777 aa4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 DCAF12L1Q5VU92 463 aa4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 KIAA1614Q5VZ46 1190 aa4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 ZNF626Q68DY1 528 aa4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 HIBCHQ6NVY1 386 aaPredicted RBP4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 PEG10Q86TG7 708 aaKnown RBP4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 SKAP1Q86WV1 359 aa4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 VGLL2Q8N8G2 317 aa4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 ATP11CQ8NB49 1132 aa4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 OR56A3Q8NH54 315 aa4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 IQCDQ96DY2 449 aa4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 SNX22Q96L94 193 aa4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 MOGAT1Q96PD6 335 aa4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 SMOQ99835 787 aa4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 ETAA1Q9NY74 926 aa4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 HSFX1Q9UBD0 423 aa4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 XPR1Q9UBH6 696 aa4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 HESX1Q9UBX0 185 aa4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 RGS17Q9UGC6 210 aaPredicted RBP4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 LRCH1Q9Y2L9 728 aa4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 MTO1Q9Y2Z2 717 aaKnown RBP4.27□□□□□ -1.73
SNRNP27-204ENST00000487029 ZNF804BA4D1E1 1349 aa4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 CCDC195A0A1B0GUA6 201 aa4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 TMEM233B4DJY2 109 aa4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 F5H423 210 aaPredicted RBP4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 THAP12O43422 761 aa4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 MT-ND5P03915 603 aa4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 CYP2C9P11712 490 aa4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 XRCC6P12956 609 aaKnown RBP eCLIP4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 IL1R1P14778 569 aa4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 ABCB4P21439 1286 aa4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 FGFR2P21802 821 aa4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 PPM1AP35813 382 aa4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 CARSP49589 748 aaKnown RBP4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 WNT3P56703 355 aa4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 TFF2Q03403 129 aa4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 ETFDHQ16134 617 aa4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 TAPT1Q6NXT6 567 aa4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 BEND5Q7L4P6 421 aa4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 MYLK4Q86YV6 388 aaPredicted RBP4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 SDR16C5Q8N3Y7 309 aa4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 Q8NA96 180 aa4.26□□□□□ -1.73
SNRNP27-204ENST00000487029 POF1BQ8WVV4 589 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms