RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 ENOX2Q16206 610 aaKnown RBP9.55□□□□□ -0.88
COL12A1-208ENST00000486533 KIAA1841Q6NSI8 718 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 RINT1Q6NUQ1 792 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 TMC5Q6UXY8 1006 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 MMS22LQ6ZRQ5 1243 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 HFE2Q6ZVN8 426 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 INTS8Q75QN2 995 aaKnown RBP9.55□□□□□ -0.88
COL12A1-208ENST00000486533 ZBTB33Q86T24 672 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 SUGP1Q8IWZ8 645 aaKnown RBP9.55□□□□□ -0.88
COL12A1-208ENST00000486533 TMEM174Q8WUU8 243 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 UBLCP1Q8WVY7 318 aaPredicted RBP9.55□□□□□ -0.88
COL12A1-208ENST00000486533 EDAQ92838 391 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 KIFAP3Q92845 792 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 HES6Q96HZ4 224 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 FAM81BQ96LP2 452 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 RIPOR3Q96MK2 946 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 NECTIN4Q96NY8 510 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 ADPGKQ9BRR6 497 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 KIFC3Q9BVG8 833 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 FZD8Q9H461 694 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 POMKQ9H5K3 350 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 PDZD7Q9H5P4 517 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 POLD4Q9HCU8 107 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 MARCH5Q9NX47 278 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 MIOSQ9NXC5 875 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 LCMT1Q9UIC8 334 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 TSR3Q9UJK0 312 aaKnown RBP9.55□□□□□ -0.88
COL12A1-208ENST00000486533 USP20Q9Y2K6 914 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 NR2E1Q9Y466 385 aa9.55□□□□□ -0.88
COL12A1-208ENST00000486533 ZNF233A6NK53 670 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 F8VZ95 297 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 F8W810 466 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 PODXLO00592 558 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 TRIM66O15016 1216 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 MEFVO15553 781 aaPredicted RBP9.54□□□□□ -0.88
COL12A1-208ENST00000486533 FAM107AO95990 144 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 SOD2P04179 222 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 GUCY2CP25092 1073 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 ABCD1P33897 745 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 MTHFRP42898 656 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 GLUD2P49448 558 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 CLCN4P51793 760 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 ZNF131P52739 623 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 EFNA5P52803 228 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 GRIK3Q13003 919 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 PDCLQ13371 301 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 FAM187BQ17R55 369 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 ODF2Q5BJF6 829 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 SEL1L2Q5TEA6 688 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 NT5DC3Q86UY8 548 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 CCDC50Q8IVM0 306 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 SYCP3Q8IZU3 236 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 SLC22A17Q8WUG5 538 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 MAIP1Q8WWC4 291 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 SEC14L1Q92503 715 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 ARL8AQ96BM9 186 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 KLHL5Q96PQ7 755 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 FMO2Q99518 471 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 HERC2P3Q9BVR0 1158 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 COLEC11Q9BWP8 271 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 PACSIN1Q9BY11 444 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 FGFBP2Q9BYJ0 223 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 SIX2Q9NPC8 291 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 SMARCAL1Q9NZC9 954 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 EHD2Q9NZN4 543 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 LARSQ9P2J5 1176 aaKnown RBP9.54□□□□□ -0.88
COL12A1-208ENST00000486533 APEX2Q9UBZ4 518 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 DNAJC12Q9UKB3 198 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 SSX2IPQ9Y2D8 614 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 ZDBF2Q9HCK1 2354 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 CCDC169A6NNP5 214 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 ACKR2O00590 384 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 FSBPO95073 299 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 ADH1AP07327 375 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 CHRNA3P32297 505 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 MAN1A1P33908 653 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 HSD17B3P37058 310 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 GALCP54803 685 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 DRG2P55039 364 aaKnown RBP9.54□□□□□ -0.88
COL12A1-208ENST00000486533 PPP2R2AP63151 447 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 ZXDAP98168 799 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 ATAT1Q5SQI0 421 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 TRIM67Q6ZTA4 783 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 CEP128Q6ZU80 1094 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 TAS1R1Q7RTX1 841 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 NLRP14Q86W24 1093 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 C12orf56Q8IXR9 622 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 GSTCDQ8NEC7 633 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 HVCN1Q96D96 273 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 B3GALT6Q96L58 329 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 FBXL18Q96ME1 805 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 ACCSQ96QU6 501 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 NSRP1Q9H0G5 558 aaKnown RBP9.54□□□□□ -0.88
COL12A1-208ENST00000486533 INTS2Q9H0H0 1204 aaKnown RBP9.54□□□□□ -0.88
COL12A1-208ENST00000486533 CCDC113Q9H0I3 377 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 SFXN1Q9H9B4 322 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 SNTG2Q9NY99 539 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 CACNG4Q9UBN1 327 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 EXOC7Q9UPT5 735 aa9.54□□□□□ -0.88
COL12A1-208ENST00000486533 ZMYM2Q9UBW7 1377 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms