RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 USP17L7P0C7H9 530 aa13.7□□□□□ -0.22
CHMP3-208ENST00000486404 CD58P19256 250 aa13.7□□□□□ -0.22
CHMP3-208ENST00000486404 TARSP26639 723 aaKnown RBP13.7□□□□□ -0.22
CHMP3-208ENST00000486404 MRE11P49959 708 aa13.7□□□□□ -0.22
CHMP3-208ENST00000486404 NDST1P52848 882 aa13.7□□□□□ -0.22
CHMP3-208ENST00000486404 FKBP3Q00688 224 aaKnown RBP13.7□□□□□ -0.22
CHMP3-208ENST00000486404 PPP3CAQ08209 521 aa13.7□□□□□ -0.22
CHMP3-208ENST00000486404 ORC1Q13415 861 aa13.7□□□□□ -0.22
CHMP3-208ENST00000486404 C1orf220Q5T0J3 134 aa13.7□□□□□ -0.22
CHMP3-208ENST00000486404 ISM2Q6H9L7 571 aa13.7□□□□□ -0.22
CHMP3-208ENST00000486404 KLHL10Q6JEL2 608 aa13.7□□□□□ -0.22
CHMP3-208ENST00000486404 ACOT1Q86TX2 421 aa13.7□□□□□ -0.22
CHMP3-208ENST00000486404 ALYREFQ86V81 257 aaKnown RBP13.7□□□□□ -0.22
CHMP3-208ENST00000486404 ADSSL1Q8N142 457 aa13.7□□□□□ -0.22
CHMP3-208ENST00000486404 FAM3CQ92520 227 aa13.7□□□□□ -0.22
CHMP3-208ENST00000486404 SLITRK1Q96PX8 696 aa13.7□□□□□ -0.22
CHMP3-208ENST00000486404 B3GNT5Q9BYG0 378 aa13.7□□□□□ -0.22
CHMP3-208ENST00000486404 SDCBP2Q9H190 292 aa13.7□□□□□ -0.22
CHMP3-208ENST00000486404 C8orf33Q9H7E9 229 aaPredicted RBP13.7□□□□□ -0.22
CHMP3-208ENST00000486404 DMAP1Q9NPF5 467 aaPredicted RBP13.7□□□□□ -0.22
CHMP3-208ENST00000486404 TDP1Q9NUW8 608 aa13.7□□□□□ -0.22
CHMP3-208ENST00000486404 TRPM5Q9NZQ8 1165 aa13.7□□□□□ -0.22
CHMP3-208ENST00000486404 HMGXB4Q9UGU5 601 aa13.7□□□□□ -0.22
CHMP3-208ENST00000486404 MAN1B1Q9UKM7 699 aa13.7□□□□□ -0.22
CHMP3-208ENST00000486404 CLDN5O00501 218 aa13.69□□□□□ -0.22
CHMP3-208ENST00000486404 GADD45BO75293 160 aaPredicted RBP13.69□□□□□ -0.22
CHMP3-208ENST00000486404 RTN3O95197 1032 aaPredicted RBP13.69□□□□□ -0.22
CHMP3-208ENST00000486404 ABL1P00519 1130 aa13.69□□□□□ -0.22
CHMP3-208ENST00000486404 CCDC130P13994 396 aa13.69□□□□□ -0.22
CHMP3-208ENST00000486404 GLULP15104 373 aa13.69□□□□□ -0.22
CHMP3-208ENST00000486404 ZNF268Q14587 947 aaPredicted RBP13.69□□□□□ -0.22
CHMP3-208ENST00000486404 CCDC40Q4G0X9 1142 aa13.69□□□□□ -0.22
CHMP3-208ENST00000486404 WDR44Q5JSH3 913 aa13.69□□□□□ -0.22
CHMP3-208ENST00000486404 UNC93AQ86WB7 457 aa13.69□□□□□ -0.22
CHMP3-208ENST00000486404 C1orf210Q8IVY1 113 aa13.69□□□□□ -0.22
CHMP3-208ENST00000486404 ELOA2Q8IYF1 753 aaPredicted RBP13.69□□□□□ -0.22
CHMP3-208ENST00000486404 FBXL13Q8NEE6 735 aa13.69□□□□□ -0.22
CHMP3-208ENST00000486404 TTC8Q8TAM2 541 aa13.69□□□□□ -0.22
CHMP3-208ENST00000486404 SPATA20Q8TB22 786 aa13.69□□□□□ -0.22
CHMP3-208ENST00000486404 USP13Q92995 863 aaPredicted RBP13.69□□□□□ -0.22
CHMP3-208ENST00000486404 DHTKD1Q96HY7 919 aaPredicted RBP13.69□□□□□ -0.22
CHMP3-208ENST00000486404 PHOX2BQ99453 314 aa13.69□□□□□ -0.22
CHMP3-208ENST00000486404 CYP3A43Q9HB55 503 aa13.69□□□□□ -0.22
CHMP3-208ENST00000486404 FAM49BQ9NUQ9 324 aa13.69□□□□□ -0.22
CHMP3-208ENST00000486404 DLGAP2Q9P1A6 1054 aa13.69□□□□□ -0.22
CHMP3-208ENST00000486404 ARMCX3Q9UH62 379 aaPredicted RBP13.69□□□□□ -0.22
CHMP3-208ENST00000486404 CTNND2Q9UQB3 1225 aa13.69□□□□□ -0.22
CHMP3-208ENST00000486404 CCL26Q9Y258 94 aa13.69□□□□□ -0.22
CHMP3-208ENST00000486404 MTF2Q9Y483 593 aaPredicted RBP13.69□□□□□ -0.22
CHMP3-208ENST00000486404 F5P12259 2224 aa13.69□□□□□ -0.22
CHMP3-208ENST00000486404 FANCMQ8IYD8 2048 aa13.69□□□□□ -0.22
CHMP3-208ENST00000486404 BICDL2A1A5D9 508 aa13.68□□□□□ -0.22
CHMP3-208ENST00000486404 ARNTLO00327 626 aa13.68□□□□□ -0.22
CHMP3-208ENST00000486404 BIN1O00499 593 aa13.68□□□□□ -0.22
CHMP3-208ENST00000486404 LAMTOR5O43504 91 aa13.68□□□□□ -0.22
CHMP3-208ENST00000486404 AP1G2O75843 785 aa13.68□□□□□ -0.22
CHMP3-208ENST00000486404 CCNE1P24864 410 aa13.68□□□□□ -0.22
CHMP3-208ENST00000486404 ADORA2BP29275 332 aa13.68□□□□□ -0.22
CHMP3-208ENST00000486404 SOX9P48436 509 aa13.68□□□□□ -0.22
CHMP3-208ENST00000486404 PPP3CCP48454 512 aa13.68□□□□□ -0.22
CHMP3-208ENST00000486404 USP46P62068 366 aa13.68□□□□□ -0.22
CHMP3-208ENST00000486404 UBE2HP62256 183 aa13.68□□□□□ -0.22
CHMP3-208ENST00000486404 INCA1Q0VD86 236 aa13.68□□□□□ -0.22
CHMP3-208ENST00000486404 LRRC32Q14392 662 aa13.68□□□□□ -0.22
CHMP3-208ENST00000486404 MTF1Q14872 753 aa13.68□□□□□ -0.22
CHMP3-208ENST00000486404 ITPRIPL2Q3MIP1 535 aa13.68□□□□□ -0.22
CHMP3-208ENST00000486404 ANKRD40Q6AI12 368 aa13.68□□□□□ -0.22
CHMP3-208ENST00000486404 ZC3H14Q6PJT7 736 aaKnown RBP13.68□□□□□ -0.22
CHMP3-208ENST00000486404 FRMD5Q7Z6J6 570 aa13.68□□□□□ -0.22
CHMP3-208ENST00000486404 NUP93Q8N1F7 819 aa13.68□□□□□ -0.22
CHMP3-208ENST00000486404 PDZD8Q8NEN9 1154 aa13.68□□□□□ -0.22
CHMP3-208ENST00000486404 SLC2A14Q8TDB8 520 aa13.68□□□□□ -0.22
CHMP3-208ENST00000486404 FBXO32Q969P5 355 aa13.68□□□□□ -0.22
CHMP3-208ENST00000486404 TTLL2Q9BWV7 592 aa13.68□□□□□ -0.22
CHMP3-208ENST00000486404 NT5C1AQ9BXI3 368 aa13.68□□□□□ -0.22
CHMP3-208ENST00000486404 GTSE1Q9NYZ3 720 aa13.68□□□□□ -0.22
CHMP3-208ENST00000486404 C2orf78A6NCI8 922 aa13.67□□□□□ -0.22
CHMP3-208ENST00000486404 SPECC1L-ADORA2AF8WAN1 911 aa13.67□□□□□ -0.22
CHMP3-208ENST00000486404 FAM200BP0CF97 657 aa13.67□□□□□ -0.22
CHMP3-208ENST00000486404 PFKLP17858 780 aa13.67□□□□□ -0.22
CHMP3-208ENST00000486404 YWHAQP27348 245 aa13.67□□□□□ -0.22
CHMP3-208ENST00000486404 CTHP32929 405 aa13.67□□□□□ -0.22
CHMP3-208ENST00000486404 RPS9P46781 194 aaKnown RBP13.67□□□□□ -0.22
CHMP3-208ENST00000486404 IFNAR2P48551 515 aa13.67□□□□□ -0.22
CHMP3-208ENST00000486404 SLC5A3P53794 718 aa13.67□□□□□ -0.22
CHMP3-208ENST00000486404 PMS1P54277 932 aaKnown RBP13.67□□□□□ -0.22
CHMP3-208ENST00000486404 CACNA2D1P54289 1103 aa13.67□□□□□ -0.22
CHMP3-208ENST00000486404 MLLT6P55198 1093 aaPredicted RBP13.67□□□□□ -0.22
CHMP3-208ENST00000486404 TNK2Q07912 1038 aa13.67□□□□□ -0.22
CHMP3-208ENST00000486404 TAF10Q12962 218 aa13.67□□□□□ -0.22
CHMP3-208ENST00000486404 USP4Q13107 963 aa13.67□□□□□ -0.22
CHMP3-208ENST00000486404 PDGFRLQ15198 375 aa13.67□□□□□ -0.22
CHMP3-208ENST00000486404 RALGPS2Q86X27 583 aaPredicted RBP13.67□□□□□ -0.22
CHMP3-208ENST00000486404 TTC39CQ8N584 583 aa13.67□□□□□ -0.22
CHMP3-208ENST00000486404 ARL14EPQ8N8R7 260 aaPredicted RBP13.67□□□□□ -0.22
CHMP3-208ENST00000486404 NELFBQ8WX92 580 aa13.67□□□□□ -0.22
CHMP3-208ENST00000486404 JAKMIP2Q96AA8 810 aa13.67□□□□□ -0.22
CHMP3-208ENST00000486404 LRRC3BQ96PB8 259 aa13.67□□□□□ -0.22
CHMP3-208ENST00000486404 IER2Q9BTL4 223 aa13.67□□□□□ -0.22
CHMP3-208ENST00000486404 APOBEC3GQ9HC16 384 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms