RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 GPR158Q5T848 1215 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 LMBRD2Q68DH5 695 aaPredicted RBP10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 TMEM150AQ86TG1 271 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 OSTM1Q86WC4 334 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 ZC3H3Q8IXZ2 948 aaKnown RBP10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 CCAR2Q8N163 923 aaKnown RBP10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 TC2NQ8N9U0 490 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 ZNF507Q8TCN5 953 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 RUBCNQ92622 972 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 DNASE1L2Q92874 299 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 IRF7Q92985 503 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 CNOT6LQ96LI5 555 aaKnown RBP10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 ERGIC2Q96RQ1 377 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 BAG1Q99933 345 aaPredicted RBP10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 SLC46A2Q9BY10 475 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 ZCWPW1Q9H0M4 648 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 SEMA4AQ9H3S1 761 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 PCIF1Q9H4Z3 704 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 TRPV4Q9HBA0 871 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 PARD6AQ9NPB6 346 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 PRMT8Q9NR22 394 aaPredicted RBP10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 ZSCAN32Q9NX65 697 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 KCNG1Q9UIX4 513 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 TRAF3IP3Q9Y228 551 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 STYXL1Q9Y6J8 313 aa10.05□□□□□ -0.8
TMEM39A-208ENST00000486159 OTOL1A6NHN0 477 aaPredicted RBP10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 PDXKO00764 312 aa10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 TEX33O43247 280 aa10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 CALUO43852 315 aaPredicted RBP10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 PRPF6O94906 941 aaKnown RBP10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 CYP11A1P05108 521 aa10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 RPS9P46781 194 aaKnown RBP10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 ARID5BQ14865 1188 aa10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 PON2Q15165 354 aa10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 KNOP1Q1ED39 458 aaKnown RBP10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 RSPO4Q2I0M5 234 aaPredicted RBP10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 TSR1Q2NL82 804 aaKnown RBP10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 ZNF528Q3MIS6 628 aa10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 NAIF1Q69YI7 327 aaPredicted RBP10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 TRIM68Q6AZZ1 485 aa10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 PKN3Q6P5Z2 889 aa10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 ZC3H14Q6PJT7 736 aaKnown RBP10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 EPM2AIP1Q7L775 607 aaPredicted RBP10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 TMTC1Q8IUR5 882 aa10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 CXorf38Q8TB03 319 aa10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 GOLGA5Q8TBA6 731 aa10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 ATRIPQ8WXE1 791 aa10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 POMGNT1Q8WZA1 660 aa10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 PSMG2Q969U7 264 aa10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 CHFRQ96EP1 664 aa10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 NELL2Q99435 816 aa10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 CBWD1Q9BRT8 395 aa10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 FAM213AQ9BRX8 229 aa10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 EDEM3Q9BZQ6 932 aa10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 VPS16Q9H269 839 aa10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 CHRDQ9H2X0 955 aa10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 KCTD10Q9H3F6 313 aa10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 ABI2Q9NYB9 513 aaPredicted RBP10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 TAB2Q9NYJ8 693 aa10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 CGNQ9P2M7 1197 aaKnown RBP10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 CCL26Q9Y258 94 aa10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 PAXBP1Q9Y5B6 917 aa10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 NUP210Q8TEM1 1887 aaPredicted RBP10.04□□□□□ -0.8
TMEM39A-208ENST00000486159 DENND4CQ5VZ89 1909 aa10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 ATG2BQ96BY7 2078 aa10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 A0A1W2PQJ5 194 aa10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 ANTXRLA6NF34 631 aa10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 CHURC1-FNTBB4DL54 471 aa10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 SPECC1L-ADORA2AF8WAN1 911 aa10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 SNPHO15079 494 aa10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 CETN3O15182 167 aa10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 XPOTO43592 962 aaKnown RBP10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 HRO43593 1189 aa10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 MFAP3LO75121 409 aa10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 OBSL1O75147 1896 aa10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 ITGB3P05106 788 aa10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 HAPLN1P10915 354 aaPredicted RBP10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 HMGA1P17096 107 aaKnown RBP10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 SCP2P22307 547 aa10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 POLR2BP30876 1174 aaKnown RBP10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 ABCD1P33897 745 aa10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 FNTBP49356 437 aa10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 TAF6P49848 677 aa10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 SNRPFP62306 86 aaKnown RBP10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 TFAMQ00059 246 aaKnown RBP10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 FCHO2Q0JRZ9 810 aa10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 VWA3BQ502W6 1294 aa10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 HEATR6Q6AI08 1181 aaKnown RBP10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 CD302Q8IX05 232 aa10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 C1orf127Q8N9H9 656 aa10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 TMEM174Q8WUU8 243 aa10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 DEPDC1BQ8WUY9 529 aa10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 SCFD1Q8WVM8 642 aa10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 PI4K2AQ9BTU6 479 aa10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 ST6GALNAC4Q9H4F1 302 aa10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 ASB7Q9H672 318 aa10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 MRPL44Q9H9J2 332 aaKnown RBP10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 METTL14Q9HCE5 456 aaKnown RBP10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 NCDNQ9UBB6 729 aa10.03□□□□□ -0.8
TMEM39A-208ENST00000486159 MAFFQ9ULX9 164 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms