RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 CMTR2Q8IYT2 770 aaKnown RBP15.2■□□□□ 0.02
COL9A1-207ENST00000486080 EMC1Q8N766 993 aa15.2■□□□□ 0.02
COL9A1-207ENST00000486080 ZMIZ2Q8NF64 920 aa15.2■□□□□ 0.02
COL9A1-207ENST00000486080 CLEC4CQ8WTT0 213 aa15.2■□□□□ 0.02
COL9A1-207ENST00000486080 IGSF21Q96ID5 467 aa15.2■□□□□ 0.02
COL9A1-207ENST00000486080 YME1L1Q96TA2 773 aa15.2■□□□□ 0.02
COL9A1-207ENST00000486080 MIS12Q9H081 205 aa15.2■□□□□ 0.02
COL9A1-207ENST00000486080 ZCWPW1Q9H0M4 648 aa15.2■□□□□ 0.02
COL9A1-207ENST00000486080 CCDC85CA6NKD9 419 aa15.19■□□□□ 0.02
COL9A1-207ENST00000486080 DDX3YO15523 660 aaKnown RBP15.19■□□□□ 0.02
COL9A1-207ENST00000486080 SPOPO43791 374 aa15.19■□□□□ 0.02
COL9A1-207ENST00000486080 GRAP2O75791 330 aa15.19■□□□□ 0.02
COL9A1-207ENST00000486080 PROSCO94903 275 aa15.19■□□□□ 0.02
COL9A1-207ENST00000486080 EFEMP2O95967 443 aa15.19■□□□□ 0.02
COL9A1-207ENST00000486080 PRLRP16471 622 aa15.19■□□□□ 0.02
COL9A1-207ENST00000486080 MARCKSL1P49006 195 aa15.19■□□□□ 0.02
COL9A1-207ENST00000486080 SLC8A3P57103 927 aa15.19■□□□□ 0.02
COL9A1-207ENST00000486080 RNASE9P60153 205 aaKnown RBP15.19■□□□□ 0.02
COL9A1-207ENST00000486080 CTXN3Q4LDR2 81 aa15.19■□□□□ 0.02
COL9A1-207ENST00000486080 SLC39A12Q504Y0 691 aa15.19■□□□□ 0.02
COL9A1-207ENST00000486080 OLFML1Q6UWY5 402 aa15.19■□□□□ 0.02
COL9A1-207ENST00000486080 KRT35Q92764 455 aa15.19■□□□□ 0.02
COL9A1-207ENST00000486080 CD101Q93033 1021 aa15.19■□□□□ 0.02
COL9A1-207ENST00000486080 HSFY1Q96LI6 401 aa15.19■□□□□ 0.02
COL9A1-207ENST00000486080 CARD6Q9BX69 1037 aa15.19■□□□□ 0.02
COL9A1-207ENST00000486080 KCNK3O14649 394 aa15.18■□□□□ 0.02
COL9A1-207ENST00000486080 GJB5O95377 273 aa15.18■□□□□ 0.02
COL9A1-207ENST00000486080 TCP1P17987 556 aaKnown RBP15.18■□□□□ 0.02
COL9A1-207ENST00000486080 TAP1Q03518 808 aa15.18■□□□□ 0.02
COL9A1-207ENST00000486080 ELAVL2Q12926 359 aaKnown RBP15.18■□□□□ 0.02
COL9A1-207ENST00000486080 TUBB2AQ13885 445 aa15.18■□□□□ 0.02
COL9A1-207ENST00000486080 RSPO2Q6UXX9 243 aaPredicted RBP15.18■□□□□ 0.02
COL9A1-207ENST00000486080 CREG2Q8IUH2 290 aa15.18■□□□□ 0.02
COL9A1-207ENST00000486080 NDRG1Q92597 394 aaKnown RBP15.18■□□□□ 0.02
COL9A1-207ENST00000486080 ALG3Q92685 438 aa15.18■□□□□ 0.02
COL9A1-207ENST00000486080 KHSRPQ92945 711 aaKnown RBP eCLIP15.18■□□□□ 0.02
COL9A1-207ENST00000486080 SMARCD1Q96GM5 515 aa15.18■□□□□ 0.02
COL9A1-207ENST00000486080 MS4A14Q96JA4 679 aa15.18■□□□□ 0.02
COL9A1-207ENST00000486080 ZNF558Q96NG5 402 aa15.18■□□□□ 0.02
COL9A1-207ENST00000486080 TTPALQ9BTX7 342 aa15.18■□□□□ 0.02
COL9A1-207ENST00000486080 HTATIP2Q9BUP3 242 aa15.18■□□□□ 0.02
COL9A1-207ENST00000486080 TUBB2BQ9BVA1 445 aa15.18■□□□□ 0.02
COL9A1-207ENST00000486080 SMARCAL1Q9NZC9 954 aa15.18■□□□□ 0.02
COL9A1-207ENST00000486080 EHD2Q9NZN4 543 aa15.18■□□□□ 0.02
COL9A1-207ENST00000486080 IP6K2Q9UHH9 426 aa15.18■□□□□ 0.02
COL9A1-207ENST00000486080 USTQ9Y2C2 406 aa15.18■□□□□ 0.02
COL9A1-207ENST00000486080 LAMA2P24043 3122 aaKnown RBP15.18■□□□□ 0.02
COL9A1-207ENST00000486080 PDE2AO00408 941 aaPredicted RBP15.17■□□□□ 0.02
COL9A1-207ENST00000486080 CYP2F1P24903 491 aa15.17■□□□□ 0.02
COL9A1-207ENST00000486080 NDUFV1P49821 464 aa15.17■□□□□ 0.02
COL9A1-207ENST00000486080 SLC6A3Q01959 620 aa15.17■□□□□ 0.02
COL9A1-207ENST00000486080 ADIGQ0VDE8 80 aa15.17■□□□□ 0.02
COL9A1-207ENST00000486080 MAPRE1Q15691 268 aaKnown RBP15.17■□□□□ 0.02
COL9A1-207ENST00000486080 ZNF280DQ6N043 979 aa15.17■□□□□ 0.02
COL9A1-207ENST00000486080 TRNP1Q6NT89 227 aa15.17■□□□□ 0.02
COL9A1-207ENST00000486080 PSRC1Q6PGN9 363 aaPredicted RBP15.17■□□□□ 0.02
COL9A1-207ENST00000486080 PRSS55Q6UWB4 352 aaPredicted RBP15.17■□□□□ 0.02
COL9A1-207ENST00000486080 GPRIN1Q7Z2K8 1008 aa15.17■□□□□ 0.02
COL9A1-207ENST00000486080 SLC39A11Q8N1S5 342 aa15.17■□□□□ 0.02
COL9A1-207ENST00000486080 COLGALT1Q8NBJ5 622 aa15.17■□□□□ 0.02
COL9A1-207ENST00000486080 CYLDQ9NQC7 956 aa15.17■□□□□ 0.02
COL9A1-207ENST00000486080 TMEM59LQ9UK28 342 aa15.17■□□□□ 0.02
COL9A1-207ENST00000486080 HHLA1C9JL84 531 aa15.17■□□□□ 0.02
COL9A1-207ENST00000486080 F8VP50 259 aa15.17■□□□□ 0.02
COL9A1-207ENST00000486080 TBC1D4O60343 1298 aa15.17■□□□□ 0.02
COL9A1-207ENST00000486080 SLU7O95391 586 aaKnown RBP15.17■□□□□ 0.02
COL9A1-207ENST00000486080 ACADSBP45954 432 aa15.17■□□□□ 0.02
COL9A1-207ENST00000486080 ARPP19P56211 112 aa15.17■□□□□ 0.02
COL9A1-207ENST00000486080 SNX16P57768 344 aa15.17■□□□□ 0.02
COL9A1-207ENST00000486080 HTRA4P83105 476 aaPredicted RBP15.17■□□□□ 0.02
COL9A1-207ENST00000486080 WHAMMP3Q1A5X7 153 aa15.17■□□□□ 0.02
COL9A1-207ENST00000486080 DCAF12L1Q5VU92 463 aa15.17■□□□□ 0.02
COL9A1-207ENST00000486080 SPATA2LQ8IUW3 424 aaPredicted RBP15.17■□□□□ 0.02
COL9A1-207ENST00000486080 RNF168Q8IYW5 571 aaPredicted RBP15.17■□□□□ 0.02
COL9A1-207ENST00000486080 DCP1BQ8IZD4 617 aaKnown RBP15.17■□□□□ 0.02
COL9A1-207ENST00000486080 KCTD13Q8WZ19 329 aa15.17■□□□□ 0.02
COL9A1-207ENST00000486080 DPF3Q92784 378 aa15.17■□□□□ 0.02
COL9A1-207ENST00000486080 CSNK1G1Q9HCP0 422 aa15.17■□□□□ 0.02
COL9A1-207ENST00000486080 PATJQ8NI35 1801 aa15.16■□□□□ 0.02
COL9A1-207ENST00000486080 TCF4P15884 667 aa15.16■□□□□ 0.02
COL9A1-207ENST00000486080 LAG3P18627 525 aa15.16■□□□□ 0.02
COL9A1-207ENST00000486080 PSMA2P25787 234 aa15.16■□□□□ 0.02
COL9A1-207ENST00000486080 FLT3P36888 993 aa15.16■□□□□ 0.02
COL9A1-207ENST00000486080 PEX5P50542 639 aa15.16■□□□□ 0.02
COL9A1-207ENST00000486080 TAS2R40P59535 323 aa15.16■□□□□ 0.02
COL9A1-207ENST00000486080 ADCY1Q08828 1119 aa15.16■□□□□ 0.02
COL9A1-207ENST00000486080 USP41Q3LFD5 358 aa15.16■□□□□ 0.02
COL9A1-207ENST00000486080 C4orf50Q6ZRC1 276 aa15.16■□□□□ 0.02
COL9A1-207ENST00000486080 HERVK_113Q902F9 699 aa15.16■□□□□ 0.02
COL9A1-207ENST00000486080 PGLYRP2Q96PD5 576 aa15.16■□□□□ 0.02
COL9A1-207ENST00000486080 ZBED2Q9BTP6 218 aa15.16■□□□□ 0.02
COL9A1-207ENST00000486080 LRRC4Q9HBW1 653 aa15.16■□□□□ 0.02
COL9A1-207ENST00000486080 ABI2Q9NYB9 513 aaPredicted RBP15.16■□□□□ 0.02
COL9A1-207ENST00000486080 OR6C75A6NL08 312 aa15.15■□□□□ 0.02
COL9A1-207ENST00000486080 MIF4GDA9UHW6 222 aaKnown RBP15.15■□□□□ 0.02
COL9A1-207ENST00000486080 MAN1A1P33908 653 aa15.15■□□□□ 0.02
COL9A1-207ENST00000486080 CTNNA1P35221 906 aaKnown RBP15.15■□□□□ 0.02
COL9A1-207ENST00000486080 SLC1A1P43005 524 aa15.15■□□□□ 0.02
COL9A1-207ENST00000486080 TKTL1P51854 596 aa15.15■□□□□ 0.02
COL9A1-207ENST00000486080 ANKS3Q6ZW76 656 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms