RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 HOXD13P35453 343 aa11.34□□□□□ -0.59
HMGN1-215ENST00000485550 ASIC1P78348 528 aa11.34□□□□□ -0.59
HMGN1-215ENST00000485550 MYL7Q01449 175 aa11.34□□□□□ -0.59
HMGN1-215ENST00000485550 E2F4Q16254 413 aa11.34□□□□□ -0.59
HMGN1-215ENST00000485550 DAB2IPQ5VWQ8 1189 aa11.34□□□□□ -0.59
HMGN1-215ENST00000485550 FSTL4Q6MZW2 842 aa11.34□□□□□ -0.59
HMGN1-215ENST00000485550 SHC4Q6S5L8 630 aa11.34□□□□□ -0.59
HMGN1-215ENST00000485550 TMEM150AQ86TG1 271 aa11.34□□□□□ -0.59
HMGN1-215ENST00000485550 NELFCDQ8IXH7 590 aa11.34□□□□□ -0.59
HMGN1-215ENST00000485550 CMTM8Q8IZV2 173 aa11.34□□□□□ -0.59
HMGN1-215ENST00000485550 LRRC52Q8N7C0 313 aa11.34□□□□□ -0.59
HMGN1-215ENST00000485550 SPRYD3Q8NCJ5 442 aa11.34□□□□□ -0.59
HMGN1-215ENST00000485550 RNF166Q96A37 237 aaPredicted RBP11.34□□□□□ -0.59
HMGN1-215ENST00000485550 ANKRD36BP1Q96IX9 119 aa11.34□□□□□ -0.59
HMGN1-215ENST00000485550 ACBD6Q9BR61 282 aa11.34□□□□□ -0.59
HMGN1-215ENST00000485550 TRIM9Q9C026 710 aa11.34□□□□□ -0.59
HMGN1-215ENST00000485550 BLZF1Q9H2G9 400 aa11.34□□□□□ -0.59
HMGN1-215ENST00000485550 GKN1Q9NS71 199 aa11.34□□□□□ -0.59
HMGN1-215ENST00000485550 INTS13Q9NVM9 706 aa11.34□□□□□ -0.59
HMGN1-215ENST00000485550 KBTBD4Q9NVX7 518 aa11.34□□□□□ -0.59
HMGN1-215ENST00000485550 HSPBP1Q9NZL4 362 aa11.34□□□□□ -0.59
HMGN1-215ENST00000485550 ITGA11Q9UKX5 1188 aa11.34□□□□□ -0.59
HMGN1-215ENST00000485550 CCL26Q9Y258 94 aa11.34□□□□□ -0.59
HMGN1-215ENST00000485550 R3HCC1Q9Y3T6 440 aaKnown RBP11.34□□□□□ -0.59
HMGN1-215ENST00000485550 MORC2Q9Y6X9 1032 aaPredicted RBP11.34□□□□□ -0.59
HMGN1-215ENST00000485550 SCN1AP35498 2009 aa11.34□□□□□ -0.59
HMGN1-215ENST00000485550 TSC2P49815 1807 aa11.34□□□□□ -0.59
HMGN1-215ENST00000485550 PTPRJQ12913 1337 aa11.34□□□□□ -0.59
HMGN1-215ENST00000485550 ANAPC1Q9H1A4 1944 aa11.33□□□□□ -0.6
HMGN1-215ENST00000485550 ZNF233A6NK53 670 aa11.33□□□□□ -0.6
HMGN1-215ENST00000485550 CUTAO60888 179 aa11.33□□□□□ -0.6
HMGN1-215ENST00000485550 ATP2C2O75185 946 aa11.33□□□□□ -0.6
HMGN1-215ENST00000485550 AKAP3O75969 853 aa11.33□□□□□ -0.6
HMGN1-215ENST00000485550 CSH1P0DML2 217 aa11.33□□□□□ -0.6
HMGN1-215ENST00000485550 CSH2P0DML3 217 aa11.33□□□□□ -0.6
HMGN1-215ENST00000485550 LMO2P25791 158 aa11.33□□□□□ -0.6
HMGN1-215ENST00000485550 AVPR1AP37288 418 aa11.33□□□□□ -0.6
HMGN1-215ENST00000485550 NLRP12P59046 1061 aa11.33□□□□□ -0.6
HMGN1-215ENST00000485550 AMPD3Q01432 767 aa11.33□□□□□ -0.6
HMGN1-215ENST00000485550 ELF2Q15723 593 aa11.33□□□□□ -0.6
HMGN1-215ENST00000485550 NFE2Q16621 373 aaPredicted RBP11.33□□□□□ -0.6
HMGN1-215ENST00000485550 SOWAHAQ2M3V2 549 aa11.33□□□□□ -0.6
HMGN1-215ENST00000485550 UAP1L1Q3KQV9 507 aa11.33□□□□□ -0.6
HMGN1-215ENST00000485550 ITPRIPL2Q3MIP1 535 aa11.33□□□□□ -0.6
HMGN1-215ENST00000485550 INTS6LQ5JSJ4 861 aaKnown RBP11.33□□□□□ -0.6
HMGN1-215ENST00000485550 TRIM68Q6AZZ1 485 aa11.33□□□□□ -0.6
HMGN1-215ENST00000485550 STXBP4Q6ZWJ1 553 aa11.33□□□□□ -0.6
HMGN1-215ENST00000485550 SPATA2LQ8IUW3 424 aaPredicted RBP11.33□□□□□ -0.6
HMGN1-215ENST00000485550 SCN4BQ8IWT1 228 aa11.33□□□□□ -0.6
HMGN1-215ENST00000485550 ADGRF2Q8IZF7 708 aa11.33□□□□□ -0.6
HMGN1-215ENST00000485550 TMEM86AQ8N2M4 240 aa11.33□□□□□ -0.6
HMGN1-215ENST00000485550 IQUBQ8NA54 791 aa11.33□□□□□ -0.6
HMGN1-215ENST00000485550 MRPS31Q92665 395 aaKnown RBP11.33□□□□□ -0.6
HMGN1-215ENST00000485550 HPDLQ96IR7 371 aa11.33□□□□□ -0.6
HMGN1-215ENST00000485550 LRRC27Q9C0I9 530 aa11.33□□□□□ -0.6
HMGN1-215ENST00000485550 TNMDQ9H2S6 317 aa11.33□□□□□ -0.6
HMGN1-215ENST00000485550 TRPC7Q9HCX4 862 aa11.33□□□□□ -0.6
HMGN1-215ENST00000485550 THG1LQ9NWX6 298 aaKnown RBP11.33□□□□□ -0.6
HMGN1-215ENST00000485550 GDAP2Q9NXN4 497 aa11.33□□□□□ -0.6
HMGN1-215ENST00000485550 OBP2AQ9NY56 170 aa11.33□□□□□ -0.6
HMGN1-215ENST00000485550 INVSQ9Y283 1065 aa11.33□□□□□ -0.6
HMGN1-215ENST00000485550 ACACAQ13085 2346 aa11.33□□□□□ -0.6
HMGN1-215ENST00000485550 SETXQ7Z333 2677 aaKnown RBP11.33□□□□□ -0.6
HMGN1-215ENST00000485550 GCN1Q92616 2671 aaKnown RBP11.33□□□□□ -0.6
HMGN1-215ENST00000485550 BCLAF3A2AJT9 711 aaKnown RBP11.32□□□□□ -0.6
HMGN1-215ENST00000485550 PATE3B3GLJ2 98 aa11.32□□□□□ -0.6
HMGN1-215ENST00000485550 POLR2DO15514 142 aaKnown RBP11.32□□□□□ -0.6
HMGN1-215ENST00000485550 HYAL3O43820 417 aaPredicted RBP11.32□□□□□ -0.6
HMGN1-215ENST00000485550 ATG13O75143 517 aa11.32□□□□□ -0.6
HMGN1-215ENST00000485550 RNF40O75150 1001 aa11.32□□□□□ -0.6
HMGN1-215ENST00000485550 RHOBTB1O94844 696 aa11.32□□□□□ -0.6
HMGN1-215ENST00000485550 YEATS4O95619 227 aa11.32□□□□□ -0.6
HMGN1-215ENST00000485550 EGFP01133 1207 aa11.32□□□□□ -0.6
HMGN1-215ENST00000485550 TNNC2P02585 160 aa11.32□□□□□ -0.6
HMGN1-215ENST00000485550 HSP90AA1P07900 732 aaKnown RBP11.32□□□□□ -0.6
HMGN1-215ENST00000485550 PDGFRBP09619 1106 aa11.32□□□□□ -0.6
HMGN1-215ENST00000485550 DLATP10515 647 aaKnown RBP11.32□□□□□ -0.6
HMGN1-215ENST00000485550 CEACAM1P13688 526 aa11.32□□□□□ -0.6
HMGN1-215ENST00000485550 GBP1P32455 592 aa11.32□□□□□ -0.6
HMGN1-215ENST00000485550 LHX1P48742 406 aa11.32□□□□□ -0.6
HMGN1-215ENST00000485550 CYP2J2P51589 502 aa11.32□□□□□ -0.6
HMGN1-215ENST00000485550 PSMC1P62191 440 aaKnown RBP11.32□□□□□ -0.6
HMGN1-215ENST00000485550 MYO1EQ12965 1108 aa11.32□□□□□ -0.6
HMGN1-215ENST00000485550 DUOXA2Q1HG44 320 aa11.32□□□□□ -0.6
HMGN1-215ENST00000485550 FAM26FQ5R3K3 315 aa11.32□□□□□ -0.6
HMGN1-215ENST00000485550 TOP6BLQ8N6T0 577 aa11.32□□□□□ -0.6
HMGN1-215ENST00000485550 DEFB124Q8NES8 71 aa11.32□□□□□ -0.6
HMGN1-215ENST00000485550 ZNF507Q8TCN5 953 aa11.32□□□□□ -0.6
HMGN1-215ENST00000485550 USP13Q92995 863 aaPredicted RBP11.32□□□□□ -0.6
HMGN1-215ENST00000485550 COL26A1Q96A83 441 aa11.32□□□□□ -0.6
HMGN1-215ENST00000485550 CHFRQ96EP1 664 aa11.32□□□□□ -0.6
HMGN1-215ENST00000485550 CYP2S1Q96SQ9 504 aa11.32□□□□□ -0.6
HMGN1-215ENST00000485550 MMS19Q96T76 1030 aa11.32□□□□□ -0.6
HMGN1-215ENST00000485550 PKMYT1Q99640 499 aa11.32□□□□□ -0.6
HMGN1-215ENST00000485550 CUEDC2Q9H467 287 aa11.32□□□□□ -0.6
HMGN1-215ENST00000485550 EBF3Q9H4W6 596 aa11.32□□□□□ -0.6
HMGN1-215ENST00000485550 TMEM9BQ9NQ34 198 aa11.32□□□□□ -0.6
HMGN1-215ENST00000485550 PLXNB3Q9ULL4 1909 aa11.32□□□□□ -0.6
HMGN1-215ENST00000485550 SHROOM3Q8TF72 1996 aa11.32□□□□□ -0.6
HMGN1-215ENST00000485550 ASXL3Q9C0F0 2248 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms