RNA–Protein interactions for RNA: ENST00000484412.1

HDLBP-240, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-240ENST00000484412 WNT16Q9UBV4 365 aa14.8□□□□□ -0.04
HDLBP-240ENST00000484412 HMGXB4Q9UGU5 601 aa14.8□□□□□ -0.04
HDLBP-240ENST00000484412 USP3Q9Y6I4 520 aa14.8□□□□□ -0.04
HDLBP-240ENST00000484412 RNF225M0QZC1 329 aaPredicted RBP14.79□□□□□ -0.04
HDLBP-240ENST00000484412 MYL4P12829 197 aa14.79□□□□□ -0.04
HDLBP-240ENST00000484412 RPL34P49207 117 aaKnown RBP14.79□□□□□ -0.04
HDLBP-240ENST00000484412 GPR15P49685 360 aa14.79□□□□□ -0.04
HDLBP-240ENST00000484412 ZNF165P49910 485 aa14.79□□□□□ -0.04
HDLBP-240ENST00000484412 KRT31Q15323 416 aa14.79□□□□□ -0.04
HDLBP-240ENST00000484412 TAF12Q16514 161 aa14.79□□□□□ -0.04
HDLBP-240ENST00000484412 CCDC142Q17RM4 750 aa14.79□□□□□ -0.04
HDLBP-240ENST00000484412 ARHGAP15Q53QZ3 475 aa14.79□□□□□ -0.04
HDLBP-240ENST00000484412 RAB41Q5JT25 222 aa14.79□□□□□ -0.04
HDLBP-240ENST00000484412 DENND4CQ5VZ89 1909 aa14.79□□□□□ -0.04
HDLBP-240ENST00000484412 LCLAT1Q6UWP7 414 aa14.79□□□□□ -0.04
HDLBP-240ENST00000484412 SCARA5Q6ZMJ2 495 aa14.79□□□□□ -0.04
HDLBP-240ENST00000484412 CLEC20AQ6ZU45 233 aa14.79□□□□□ -0.04
HDLBP-240ENST00000484412 SCN4BQ8IWT1 228 aa14.79□□□□□ -0.04
HDLBP-240ENST00000484412 DHX40Q8IX18 779 aaKnown RBP14.79□□□□□ -0.04
HDLBP-240ENST00000484412 PPM1KQ8N3J5 372 aa14.79□□□□□ -0.04
HDLBP-240ENST00000484412 PDZD8Q8NEN9 1154 aa14.79□□□□□ -0.04
HDLBP-240ENST00000484412 KCTD13Q8WZ19 329 aa14.79□□□□□ -0.04
HDLBP-240ENST00000484412 KHSRPQ92945 711 aaKnown RBP eCLIP14.79□□□□□ -0.04
HDLBP-240ENST00000484412 MCRS1Q96EZ8 462 aa14.79□□□□□ -0.04
HDLBP-240ENST00000484412 ARID3AQ99856 593 aa14.79□□□□□ -0.04
HDLBP-240ENST00000484412 C1QTNF1Q9BXJ1 281 aa14.79□□□□□ -0.04
HDLBP-240ENST00000484412 SLC46A2Q9BY10 475 aa14.79□□□□□ -0.04
HDLBP-240ENST00000484412 ATXN3LQ9H3M9 355 aa14.79□□□□□ -0.04
HDLBP-240ENST00000484412 FBXO44Q9H4M3 255 aa14.79□□□□□ -0.04
HDLBP-240ENST00000484412 ZFP14Q9HCL3 533 aa14.79□□□□□ -0.04
HDLBP-240ENST00000484412 GCNT4Q9P109 453 aa14.79□□□□□ -0.04
HDLBP-240ENST00000484412 TTC28Q96AY4 2481 aa14.78□□□□□ -0.04
HDLBP-240ENST00000484412 A0A1W2PRU2 124 aa14.78□□□□□ -0.04
HDLBP-240ENST00000484412 CLDN5O00501 218 aa14.78□□□□□ -0.04
HDLBP-240ENST00000484412 AP1G2O75843 785 aa14.78□□□□□ -0.04
HDLBP-240ENST00000484412 BEST1O76090 585 aa14.78□□□□□ -0.04
HDLBP-240ENST00000484412 OLFM2O95897 454 aa14.78□□□□□ -0.04
HDLBP-240ENST00000484412 FAM200BP0CF97 657 aa14.78□□□□□ -0.04
HDLBP-240ENST00000484412 NPR3P17342 541 aa14.78□□□□□ -0.04
HDLBP-240ENST00000484412 CD58P19256 250 aa14.78□□□□□ -0.04
HDLBP-240ENST00000484412 YWHAQP27348 245 aa14.78□□□□□ -0.04
HDLBP-240ENST00000484412 PDE6CP51160 858 aa14.78□□□□□ -0.04
HDLBP-240ENST00000484412 CACNA2D1P54289 1103 aa14.78□□□□□ -0.04
HDLBP-240ENST00000484412 SIGLEC14Q08ET2 396 aa14.78□□□□□ -0.04
HDLBP-240ENST00000484412 LRMPQ12912 555 aa14.78□□□□□ -0.04
HDLBP-240ENST00000484412 MTMR3Q13615 1198 aa14.78□□□□□ -0.04
HDLBP-240ENST00000484412 ANO6Q4KMQ2 910 aa14.78□□□□□ -0.04
HDLBP-240ENST00000484412 SGO2Q562F6 1265 aa14.78□□□□□ -0.04
HDLBP-240ENST00000484412 FAM78AQ5JUQ0 283 aa14.78□□□□□ -0.04
HDLBP-240ENST00000484412 PARM1Q6UWI2 310 aa14.78□□□□□ -0.04
HDLBP-240ENST00000484412 GET4Q7L5D6 327 aaPredicted RBP14.78□□□□□ -0.04
HDLBP-240ENST00000484412 CREBRFQ8IUR6 639 aa14.78□□□□□ -0.04
HDLBP-240ENST00000484412 ARHGEF19Q8IW93 802 aa14.78□□□□□ -0.04
HDLBP-240ENST00000484412 MFSD6LQ8IWD5 586 aa14.78□□□□□ -0.04
HDLBP-240ENST00000484412 CMTM8Q8IZV2 173 aa14.78□□□□□ -0.04
HDLBP-240ENST00000484412 ANKRD20A12PQ8NF67 263 aa14.78□□□□□ -0.04
HDLBP-240ENST00000484412 DEPDC1BQ8WUY9 529 aa14.78□□□□□ -0.04
HDLBP-240ENST00000484412 SLC35F5Q8WV83 523 aa14.78□□□□□ -0.04
HDLBP-240ENST00000484412 SHC3Q92529 594 aa14.78□□□□□ -0.04
HDLBP-240ENST00000484412 MRPS31Q92665 395 aaKnown RBP14.78□□□□□ -0.04
HDLBP-240ENST00000484412 FGF14Q92915 247 aa14.78□□□□□ -0.04
HDLBP-240ENST00000484412 ZSWIM3Q96MP5 696 aa14.78□□□□□ -0.04
HDLBP-240ENST00000484412 ERGIC2Q96RQ1 377 aa14.78□□□□□ -0.04
HDLBP-240ENST00000484412 NAA15Q9BXJ9 866 aaKnown RBP14.78□□□□□ -0.04
HDLBP-240ENST00000484412 DUSP12Q9UNI6 340 aa14.78□□□□□ -0.04
HDLBP-240ENST00000484412 ZNF840PA6NDX5 716 aa14.77□□□□□ -0.05
HDLBP-240ENST00000484412 O00370 1275 aa14.77□□□□□ -0.05
HDLBP-240ENST00000484412 NRG2O14511 850 aaPredicted RBP14.77□□□□□ -0.05
HDLBP-240ENST00000484412 TPM2P07951 284 aa14.77□□□□□ -0.05
HDLBP-240ENST00000484412 CEBPBP17676 345 aa14.77□□□□□ -0.05
HDLBP-240ENST00000484412 FCARP24071 287 aa14.77□□□□□ -0.05
HDLBP-240ENST00000484412 PSEN1P49768 467 aa14.77□□□□□ -0.05
HDLBP-240ENST00000484412 TUBP50607 506 aa14.77□□□□□ -0.05
HDLBP-240ENST00000484412 KIF11P52732 1056 aa14.77□□□□□ -0.05
HDLBP-240ENST00000484412 COPB1P53618 953 aaKnown RBP14.77□□□□□ -0.05
HDLBP-240ENST00000484412 FCHO2Q0JRZ9 810 aa14.77□□□□□ -0.05
HDLBP-240ENST00000484412 TEAD2Q15562 447 aa14.77□□□□□ -0.05
HDLBP-240ENST00000484412 KLHDC7AQ5VTJ3 777 aa14.77□□□□□ -0.05
HDLBP-240ENST00000484412 PM20D1Q6GTS8 502 aa14.77□□□□□ -0.05
HDLBP-240ENST00000484412 TMEM270Q6UE05 265 aa14.77□□□□□ -0.05
HDLBP-240ENST00000484412 RRAGAQ7L523 313 aa14.77□□□□□ -0.05
HDLBP-240ENST00000484412 ARID3BQ8IVW6 561 aaPredicted RBP14.77□□□□□ -0.05
HDLBP-240ENST00000484412 STK32AQ8WU08 396 aa14.77□□□□□ -0.05
HDLBP-240ENST00000484412 CRACR2AQ9BSW2 395 aa14.77□□□□□ -0.05
HDLBP-240ENST00000484412 MED10Q9BTT4 135 aa14.77□□□□□ -0.05
HDLBP-240ENST00000484412 EPHX3Q9H6B9 360 aa14.77□□□□□ -0.05
HDLBP-240ENST00000484412 TRPM5Q9NZQ8 1165 aa14.77□□□□□ -0.05
HDLBP-240ENST00000484412 MUTYHQ9UIF7 546 aa14.77□□□□□ -0.05
HDLBP-240ENST00000484412 SCML2Q9UQR0 700 aa14.77□□□□□ -0.05
HDLBP-240ENST00000484412 PCDHB4Q9Y5E5 795 aa14.77□□□□□ -0.05
HDLBP-240ENST00000484412 XPO1O14980 1071 aaKnown RBP14.76□□□□□ -0.05
HDLBP-240ENST00000484412 TADA3O75528 432 aa14.76□□□□□ -0.05
HDLBP-240ENST00000484412 SRFP11831 508 aa14.76□□□□□ -0.05
HDLBP-240ENST00000484412 CCDC130P13994 396 aa14.76□□□□□ -0.05
HDLBP-240ENST00000484412 PSMC3P17980 439 aa14.76□□□□□ -0.05
HDLBP-240ENST00000484412 CDK11BP21127 795 aaKnown RBP14.76□□□□□ -0.05
HDLBP-240ENST00000484412 PLA2G4AP47712 749 aa14.76□□□□□ -0.05
HDLBP-240ENST00000484412 SLC8A3P57103 927 aa14.76□□□□□ -0.05
HDLBP-240ENST00000484412 BPIFB4P59827 614 aa14.76□□□□□ -0.05
HDLBP-240ENST00000484412 USP46P62068 366 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms