RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 ZNF512Q96ME7 567 aaPredicted RBP18.86■□□□□ 0.61
CPNE1-224ENST00000483359 ADAM7Q9H2U9 754 aa18.86■□□□□ 0.61
CPNE1-224ENST00000483359 GRPEL1Q9HAV7 217 aa18.86■□□□□ 0.61
CPNE1-224ENST00000483359 A0A1W2PQJ5 194 aa18.86■□□□□ 0.61
CPNE1-224ENST00000483359 SLC8A3P57103 927 aa18.86■□□□□ 0.61
CPNE1-224ENST00000483359 BST2Q10589 180 aaKnown RBP18.86■□□□□ 0.61
CPNE1-224ENST00000483359 STILQ15468 1287 aa18.86■□□□□ 0.61
CPNE1-224ENST00000483359 SFMBT2Q5VUG0 894 aa18.86■□□□□ 0.61
CPNE1-224ENST00000483359 DENND1BQ6P3S1 775 aa18.86■□□□□ 0.61
CPNE1-224ENST00000483359 RTL10Q7L3V2 364 aa18.86■□□□□ 0.61
CPNE1-224ENST00000483359 GPRIN1Q7Z2K8 1008 aa18.86■□□□□ 0.61
CPNE1-224ENST00000483359 DNAJB7Q7Z6W7 309 aaPredicted RBP18.86■□□□□ 0.61
CPNE1-224ENST00000483359 GPR149Q86SP6 731 aa18.86■□□□□ 0.61
CPNE1-224ENST00000483359 CMASQ8NFW8 434 aaPredicted RBP18.86■□□□□ 0.61
CPNE1-224ENST00000483359 SECISBP2LQ93073 1101 aaKnown RBP18.86■□□□□ 0.61
CPNE1-224ENST00000483359 PSMG2Q969U7 264 aa18.86■□□□□ 0.61
CPNE1-224ENST00000483359 C8orf48Q96LL4 319 aa18.86■□□□□ 0.61
CPNE1-224ENST00000483359 PDCL3Q9H2J4 239 aa18.86■□□□□ 0.61
CPNE1-224ENST00000483359 CSNK1G1Q9HCP0 422 aa18.86■□□□□ 0.61
CPNE1-224ENST00000483359 DNMT3BQ9UBC3 853 aaKnown RBP18.86■□□□□ 0.61
CPNE1-224ENST00000483359 CAPN11Q9UMQ6 739 aa18.86■□□□□ 0.61
CPNE1-224ENST00000483359 LUC7L2Q9Y383 392 aaKnown RBP18.86■□□□□ 0.61
CPNE1-224ENST00000483359 SLC38A8A6NNN8 435 aa18.85■□□□□ 0.61
CPNE1-224ENST00000483359 KRT9P35527 623 aa18.85■□□□□ 0.61
CPNE1-224ENST00000483359 SLC5A3P53794 718 aa18.85■□□□□ 0.61
CPNE1-224ENST00000483359 USP46P62068 366 aa18.85■□□□□ 0.61
CPNE1-224ENST00000483359 ITIH3Q06033 890 aa18.85■□□□□ 0.61
CPNE1-224ENST00000483359 ASIC2Q16515 512 aa18.85■□□□□ 0.61
CPNE1-224ENST00000483359 DENND5BQ6ZUT9 1274 aa18.85■□□□□ 0.61
CPNE1-224ENST00000483359 ZNF397Q8NF99 534 aaPredicted RBP18.85■□□□□ 0.61
CPNE1-224ENST00000483359 COG5Q9UP83 839 aa18.85■□□□□ 0.61
CPNE1-224ENST00000483359 USP15Q9Y4E8 981 aaPredicted RBP18.85■□□□□ 0.61
CPNE1-224ENST00000483359 DOCK6Q96HP0 2047 aa18.85■□□□□ 0.61
CPNE1-224ENST00000483359 PIK3R2O00459 728 aa18.84■□□□□ 0.61
CPNE1-224ENST00000483359 MMEP08473 750 aa18.84■□□□□ 0.61
CPNE1-224ENST00000483359 FERP16591 822 aa18.84■□□□□ 0.61
CPNE1-224ENST00000483359 RGS7P49802 495 aa18.84■□□□□ 0.61
CPNE1-224ENST00000483359 ZBED6P86452 979 aa18.84■□□□□ 0.61
CPNE1-224ENST00000483359 TRIM14Q14142 442 aa18.84■□□□□ 0.61
CPNE1-224ENST00000483359 ITIH5Q86UX2 942 aa18.84■□□□□ 0.61
CPNE1-224ENST00000483359 PIGZQ86VD9 579 aa18.84■□□□□ 0.61
CPNE1-224ENST00000483359 DRC7Q8IY82 874 aa18.84■□□□□ 0.61
CPNE1-224ENST00000483359 SCAMP5Q8TAC9 235 aa18.84■□□□□ 0.61
CPNE1-224ENST00000483359 IQCDQ96DY2 449 aa18.84■□□□□ 0.61
CPNE1-224ENST00000483359 EDEM3Q9BZQ6 932 aa18.84■□□□□ 0.61
CPNE1-224ENST00000483359 ZNF334Q9HCZ1 680 aaPredicted RBP18.84■□□□□ 0.61
CPNE1-224ENST00000483359 ASAH2Q9NR71 780 aa18.84■□□□□ 0.61
CPNE1-224ENST00000483359 NOCTQ9UK39 431 aaKnown RBP18.84■□□□□ 0.61
CPNE1-224ENST00000483359 MYO6Q9UM54 1294 aa18.84■□□□□ 0.61
CPNE1-224ENST00000483359 PATJQ8NI35 1801 aa18.84■□□□□ 0.61
CPNE1-224ENST00000483359 RHOP08100 348 aa18.84■□□□□ 0.61
CPNE1-224ENST00000483359 MYL4P12829 197 aa18.84■□□□□ 0.61
CPNE1-224ENST00000483359 PABPC1LQ4VXU2 614 aaKnown RBP18.84■□□□□ 0.61
CPNE1-224ENST00000483359 PKDCCQ504Y2 493 aa18.84■□□□□ 0.61
CPNE1-224ENST00000483359 DDX1Q92499 740 aaKnown RBP18.84■□□□□ 0.61
CPNE1-224ENST00000483359 SPATA17Q96L03 361 aa18.84■□□□□ 0.61
CPNE1-224ENST00000483359 SEPT11Q9NVA2 429 aaKnown RBP18.84■□□□□ 0.61
CPNE1-224ENST00000483359 GRXCR2A6NFK2 248 aa18.83■□□□□ 0.61
CPNE1-224ENST00000483359 TPM1P09493 284 aa18.83■□□□□ 0.61
CPNE1-224ENST00000483359 SETSIPP0DME0 302 aa18.83■□□□□ 0.61
CPNE1-224ENST00000483359 CSH1P0DML2 217 aa18.83■□□□□ 0.61
CPNE1-224ENST00000483359 CSH2P0DML3 217 aa18.83■□□□□ 0.61
CPNE1-224ENST00000483359 SKILP12757 684 aa18.83■□□□□ 0.61
CPNE1-224ENST00000483359 HMGA1P17096 107 aaKnown RBP18.83■□□□□ 0.61
CPNE1-224ENST00000483359 PTPN2P17706 415 aa18.83■□□□□ 0.61
CPNE1-224ENST00000483359 SP100P23497 879 aaPredicted RBP18.83■□□□□ 0.61
CPNE1-224ENST00000483359 ADKP55263 362 aaKnown RBP18.83■□□□□ 0.61
CPNE1-224ENST00000483359 ATAT1Q5SQI0 421 aa18.83■□□□□ 0.61
CPNE1-224ENST00000483359 NUP93Q8N1F7 819 aa18.83■□□□□ 0.61
CPNE1-224ENST00000483359 C1orf131Q8NDD1 294 aaKnown RBP18.83■□□□□ 0.61
CPNE1-224ENST00000483359 ST7Q9NRC1 585 aa18.83■□□□□ 0.61
CPNE1-224ENST00000483359 THEGQ9P2T0 379 aa18.83■□□□□ 0.61
CPNE1-224ENST00000483359 GREB1Q4ZG55 1949 aa18.83■□□□□ 0.6
CPNE1-224ENST00000483359 HHLA1C9JL84 531 aa18.82■□□□□ 0.6
CPNE1-224ENST00000483359 NRG2O14511 850 aaPredicted RBP18.82■□□□□ 0.6
CPNE1-224ENST00000483359 XPO1O14980 1071 aaKnown RBP18.82■□□□□ 0.6
CPNE1-224ENST00000483359 MBTPS2O43462 519 aa18.82■□□□□ 0.6
CPNE1-224ENST00000483359 GJA1P17302 382 aa18.82■□□□□ 0.6
CPNE1-224ENST00000483359 SMAD4Q13485 552 aaKnown RBP18.82■□□□□ 0.6
CPNE1-224ENST00000483359 SLC5A9Q2M3M2 681 aa18.82■□□□□ 0.6
CPNE1-224ENST00000483359 PMF1Q6P1K2 205 aa18.82■□□□□ 0.6
CPNE1-224ENST00000483359 PDZD4Q76G19 769 aaPredicted RBP18.82■□□□□ 0.6
CPNE1-224ENST00000483359 IRF2BP2Q7Z5L9 587 aa18.82■□□□□ 0.6
CPNE1-224ENST00000483359 TMC8Q8IU68 726 aa18.82■□□□□ 0.6
CPNE1-224ENST00000483359 SPC24Q8NBT2 197 aa18.82■□□□□ 0.6
CPNE1-224ENST00000483359 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.82■□□□□ 0.6
CPNE1-224ENST00000483359 POMKQ9H5K3 350 aa18.82■□□□□ 0.6
CPNE1-224ENST00000483359 CYTH4Q9UIA0 394 aa18.82■□□□□ 0.6
CPNE1-224ENST00000483359 ASB3Q9Y575 518 aa18.82■□□□□ 0.6
CPNE1-224ENST00000483359 MYO16Q9Y6X6 1858 aa18.82■□□□□ 0.6
CPNE1-224ENST00000483359 TNFRSF10BO14763 440 aa18.82■□□□□ 0.6
CPNE1-224ENST00000483359 CCDC172P0C7W6 258 aa18.82■□□□□ 0.6
CPNE1-224ENST00000483359 CCR2P41597 374 aa18.82■□□□□ 0.6
CPNE1-224ENST00000483359 GPD2P43304 727 aa18.82■□□□□ 0.6
CPNE1-224ENST00000483359 CDR2Q01850 454 aa18.82■□□□□ 0.6
CPNE1-224ENST00000483359 CBX2Q14781 532 aaPredicted RBP18.82■□□□□ 0.6
CPNE1-224ENST00000483359 LEXMQ3ZCV2 418 aa18.82■□□□□ 0.6
CPNE1-224ENST00000483359 TDRD12Q587J7 1177 aaKnown RBP18.82■□□□□ 0.6
CPNE1-224ENST00000483359 GET4Q7L5D6 327 aaPredicted RBP18.82■□□□□ 0.6
CPNE1-224ENST00000483359 ING5Q8WYH8 240 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms