RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 SENP7Q9BQF6 1050 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 MAK16Q9BXY0 300 aaKnown RBP12.98□□□□□ -0.33
CCDC78-213ENST00000482878 GOLGA8SH3BPF8 625 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 GOLGA8MH3BSY2 632 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 TYROBPO43914 113 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 TBC1D12O60347 775 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 KRT1P04264 644 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 ASLP04424 464 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 ASNSP08243 561 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 LIG4P49917 911 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 GSTA3Q16772 222 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 ZBTB41Q5SVQ8 909 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 ARHGEF16Q5VV41 709 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 SWSAP1Q6NVH7 229 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 CCDC62Q6P9F0 684 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 NLRX1Q86UT6 975 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 RCOR2Q8IZ40 523 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 C10orf82Q8WW14 230 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 VCPIP1Q96JH7 1222 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 TTC25Q96NG3 672 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 PDLIM7Q9NR12 457 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 PARVAQ9NVD7 372 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 ARHGAP28Q9P2N2 729 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 SCINQ9Y6U3 715 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 F8VP50 259 aa12.97□□□□□ -0.33
CCDC78-213ENST00000482878 ESRRAP11474 423 aaPredicted RBP12.97□□□□□ -0.33
CCDC78-213ENST00000482878 ADARP55265 1226 aaKnown RBP12.97□□□□□ -0.33
CCDC78-213ENST00000482878 CXCL9Q07325 125 aa12.97□□□□□ -0.33
CCDC78-213ENST00000482878 MTMR2Q13614 643 aa12.97□□□□□ -0.33
CCDC78-213ENST00000482878 SLC44A4Q53GD3 710 aa12.97□□□□□ -0.33
CCDC78-213ENST00000482878 TRIM72Q6ZMU5 477 aa12.97□□□□□ -0.33
CCDC78-213ENST00000482878 ANKMY2Q8IV38 441 aa12.97□□□□□ -0.33
CCDC78-213ENST00000482878 ZBTB45Q96K62 511 aaPredicted RBP12.97□□□□□ -0.33
CCDC78-213ENST00000482878 NR1H4Q96RI1 486 aaPredicted RBP12.97□□□□□ -0.33
CCDC78-213ENST00000482878 TMEM121Q9BTD3 319 aa12.97□□□□□ -0.33
CCDC78-213ENST00000482878 MAF1Q9H063 256 aa12.97□□□□□ -0.33
CCDC78-213ENST00000482878 SMG5Q9UPR3 1016 aaKnown RBP12.97□□□□□ -0.33
CCDC78-213ENST00000482878 NUB1Q9Y5A7 615 aa12.97□□□□□ -0.33
CCDC78-213ENST00000482878 NFASCO94856 1347 aa12.97□□□□□ -0.33
CCDC78-213ENST00000482878 ALOX15BO15296 676 aa12.97□□□□□ -0.33
CCDC78-213ENST00000482878 OR6B1O95007 311 aa12.97□□□□□ -0.33
CCDC78-213ENST00000482878 CCDC166P0CW27 439 aa12.97□□□□□ -0.33
CCDC78-213ENST00000482878 EIF4BP23588 611 aaKnown RBP12.97□□□□□ -0.33
CCDC78-213ENST00000482878 BAG6P46379 1132 aa12.97□□□□□ -0.33
CCDC78-213ENST00000482878 SLC18A1P54219 525 aa12.97□□□□□ -0.33
CCDC78-213ENST00000482878 GAD2Q05329 585 aa12.97□□□□□ -0.33
CCDC78-213ENST00000482878 C1QBPQ07021 282 aaKnown RBP12.97□□□□□ -0.33
CCDC78-213ENST00000482878 PDIA2Q13087 525 aaKnown RBP12.97□□□□□ -0.33
CCDC78-213ENST00000482878 RNASEH2BQ5TBB1 312 aaKnown RBP12.97□□□□□ -0.33
CCDC78-213ENST00000482878 POLR3FQ9H1D9 316 aaPredicted RBP12.97□□□□□ -0.33
CCDC78-213ENST00000482878 NDE1Q9NXR1 346 aa12.97□□□□□ -0.33
CCDC78-213ENST00000482878 IP6K2Q9UHH9 426 aa12.97□□□□□ -0.33
CCDC78-213ENST00000482878 NUMBLQ9Y6R0 609 aa12.97□□□□□ -0.33
CCDC78-213ENST00000482878 TMEM191CA6NGB0 347 aa12.97□□□□□ -0.33
CCDC78-213ENST00000482878 IFNB1P01574 187 aa12.97□□□□□ -0.33
CCDC78-213ENST00000482878 TMEM191BP0C7N4 346 aa12.97□□□□□ -0.33
CCDC78-213ENST00000482878 TROVE2P10155 538 aaKnown RBP eCLIP12.97□□□□□ -0.33
CCDC78-213ENST00000482878 PGM1P36871 562 aa12.97□□□□□ -0.33
CCDC78-213ENST00000482878 OGDHQ02218 1023 aa12.97□□□□□ -0.33
CCDC78-213ENST00000482878 ENPEPQ07075 957 aa12.97□□□□□ -0.33
CCDC78-213ENST00000482878 MORF4L2Q15014 288 aa12.97□□□□□ -0.33
CCDC78-213ENST00000482878 EFTUD2Q15029 972 aaKnown RBP eCLIP12.97□□□□□ -0.33
CCDC78-213ENST00000482878 CIAPIN1Q6FI81 312 aa12.97□□□□□ -0.33
CCDC78-213ENST00000482878 DRICH1Q6PGQ1 229 aaPredicted RBP12.97□□□□□ -0.33
CCDC78-213ENST00000482878 OTOAQ7RTW8 1153 aa12.97□□□□□ -0.33
CCDC78-213ENST00000482878 SIKE1Q9BRV8 207 aa12.97□□□□□ -0.33
CCDC78-213ENST00000482878 BTBD10Q9BSF8 475 aa12.97□□□□□ -0.33
CCDC78-213ENST00000482878 KRT82Q9NSB4 513 aa12.97□□□□□ -0.33
CCDC78-213ENST00000482878 SEPT9Q9UHD8 586 aaPredicted RBP12.97□□□□□ -0.33
CCDC78-213ENST00000482878 AGO2Q9UKV8 859 aaKnown RBP12.97□□□□□ -0.33
CCDC78-213ENST00000482878 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.96□□□□□ -0.33
CCDC78-213ENST00000482878 WDR46O15213 610 aaKnown RBP12.96□□□□□ -0.33
CCDC78-213ENST00000482878 DGAT1O75907 488 aa12.96□□□□□ -0.33
CCDC78-213ENST00000482878 PGM3O95394 542 aa12.96□□□□□ -0.33
CCDC78-213ENST00000482878 KRT4P19013 534 aa12.96□□□□□ -0.33
CCDC78-213ENST00000482878 GPX6P59796 221 aa12.96□□□□□ -0.33
CCDC78-213ENST00000482878 OASLQ15646 514 aaKnown RBP12.96□□□□□ -0.33
CCDC78-213ENST00000482878 LVRNQ6Q4G3 990 aa12.96□□□□□ -0.33
CCDC78-213ENST00000482878 SPOCD1Q6ZMY3 1216 aa12.96□□□□□ -0.33
CCDC78-213ENST00000482878 SATL1Q86VE3 508 aa12.96□□□□□ -0.33
CCDC78-213ENST00000482878 AZIN2Q96A70 460 aa12.96□□□□□ -0.33
CCDC78-213ENST00000482878 MCEEQ96PE7 176 aa12.96□□□□□ -0.33
CCDC78-213ENST00000482878 ZNF212Q9UDV6 495 aa12.96□□□□□ -0.33
CCDC78-213ENST00000482878 CIB2O75838 187 aa12.96□□□□□ -0.33
CCDC78-213ENST00000482878 USP1O94782 785 aa12.96□□□□□ -0.33
CCDC78-213ENST00000482878 MMP8P22894 467 aa12.96□□□□□ -0.33
CCDC78-213ENST00000482878 PLEKHG4Q58EX7 1191 aa12.96□□□□□ -0.33
CCDC78-213ENST00000482878 RASSF3Q86WH2 238 aa12.96□□□□□ -0.33
CCDC78-213ENST00000482878 CCDC60Q8IWA6 550 aaPredicted RBP12.96□□□□□ -0.33
CCDC78-213ENST00000482878 ZNF75CPQ92670 426 aaPredicted RBP12.96□□□□□ -0.33
CCDC78-213ENST00000482878 CATSPER2Q96P56 530 aa12.96□□□□□ -0.33
CCDC78-213ENST00000482878 GMLQ99445 158 aa12.96□□□□□ -0.33
CCDC78-213ENST00000482878 C12orf65Q9H3J6 166 aaKnown RBP12.96□□□□□ -0.33
CCDC78-213ENST00000482878 C10orf88Q9H8K7 445 aa12.96□□□□□ -0.33
CCDC78-213ENST00000482878 CYLDQ9NQC7 956 aa12.96□□□□□ -0.33
CCDC78-213ENST00000482878 ARHGEF38Q9NXL2 777 aa12.96□□□□□ -0.33
CCDC78-213ENST00000482878 SENP1Q9P0U3 644 aa12.96□□□□□ -0.33
CCDC78-213ENST00000482878 STX18Q9P2W9 335 aaKnown RBP12.96□□□□□ -0.33
CCDC78-213ENST00000482878 SAE1Q9UBE0 346 aaPredicted RBP12.96□□□□□ -0.33
CCDC78-213ENST00000482878 GSC2O15499 205 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms