RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 PDE6CP51160 858 aa12.63□□□□□ -0.39
HMGN1-213ENST00000482192 CACNA2D1P54289 1103 aa12.63□□□□□ -0.39
HMGN1-213ENST00000482192 USP46P62068 366 aa12.63□□□□□ -0.39
HMGN1-213ENST00000482192 MORC3Q14149 939 aa12.63□□□□□ -0.39
HMGN1-213ENST00000482192 ZNF268Q14587 947 aaPredicted RBP12.63□□□□□ -0.39
HMGN1-213ENST00000482192 ANGPT1Q15389 498 aa12.63□□□□□ -0.39
HMGN1-213ENST00000482192 TCERG1LQ5VWI1 586 aa12.63□□□□□ -0.39
HMGN1-213ENST00000482192 FOXR2Q6PJQ5 311 aa12.63□□□□□ -0.39
HMGN1-213ENST00000482192 FAM35AQ86V20 835 aa12.63□□□□□ -0.39
HMGN1-213ENST00000482192 CRYBG2Q8N1P7 616 aa12.63□□□□□ -0.39
HMGN1-213ENST00000482192 FAM3CQ92520 227 aa12.63□□□□□ -0.39
HMGN1-213ENST00000482192 FAXDC2Q96IV6 333 aa12.63□□□□□ -0.39
HMGN1-213ENST00000482192 CEP63Q96MT8 703 aa12.63□□□□□ -0.39
HMGN1-213ENST00000482192 APOBEC3GQ9HC16 384 aaKnown RBP12.63□□□□□ -0.39
HMGN1-213ENST00000482192 METTL14Q9HCE5 456 aaKnown RBP12.63□□□□□ -0.39
HMGN1-213ENST00000482192 DMAP1Q9NPF5 467 aaPredicted RBP12.63□□□□□ -0.39
HMGN1-213ENST00000482192 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.63□□□□□ -0.394e-17■■■■■ 149.1
HMGN1-213ENST00000482192 KRT82Q9NSB4 513 aa12.63□□□□□ -0.39
HMGN1-213ENST00000482192 TMEM30AQ9NV96 361 aa12.63□□□□□ -0.39
HMGN1-213ENST00000482192 RAB20Q9NX57 234 aa12.63□□□□□ -0.39
HMGN1-213ENST00000482192 TRPM5Q9NZQ8 1165 aa12.63□□□□□ -0.39
HMGN1-213ENST00000482192 HMGXB4Q9UGU5 601 aa12.63□□□□□ -0.39
HMGN1-213ENST00000482192 ARMCX3Q9UH62 379 aaPredicted RBP12.63□□□□□ -0.39
HMGN1-213ENST00000482192 CCL26Q9Y258 94 aa12.63□□□□□ -0.39
HMGN1-213ENST00000482192 MTF2Q9Y483 593 aaPredicted RBP12.63□□□□□ -0.39
HMGN1-213ENST00000482192 TRIOO75962 3097 aa12.63□□□□□ -0.39
HMGN1-213ENST00000482192 BICDL2A1A5D9 508 aa12.62□□□□□ -0.39
HMGN1-213ENST00000482192 SHISA7A6NL88 538 aa12.62□□□□□ -0.39
HMGN1-213ENST00000482192 BIN1O00499 593 aa12.62□□□□□ -0.39
HMGN1-213ENST00000482192 LRRN2O75325 713 aa12.62□□□□□ -0.39
HMGN1-213ENST00000482192 RTN3O95197 1032 aaPredicted RBP12.62□□□□□ -0.39
HMGN1-213ENST00000482192 PFKLP17858 780 aa12.62□□□□□ -0.39
HMGN1-213ENST00000482192 BMP6P22004 513 aa12.62□□□□□ -0.39
HMGN1-213ENST00000482192 TARSP26639 723 aaKnown RBP12.62□□□□□ -0.39
HMGN1-213ENST00000482192 KPNA1P52294 538 aaPredicted RBP12.62□□□□□ -0.39
HMGN1-213ENST00000482192 ORC1Q13415 861 aa12.62□□□□□ -0.39
HMGN1-213ENST00000482192 WDR44Q5JSH3 913 aa12.62□□□□□ -0.39
HMGN1-213ENST00000482192 CC2D1AQ6P1N0 951 aaPredicted RBP12.62□□□□□ -0.39
HMGN1-213ENST00000482192 PAQR9Q6ZVX9 377 aa12.62□□□□□ -0.39
HMGN1-213ENST00000482192 FUKQ8N0W3 1084 aa12.62□□□□□ -0.39
HMGN1-213ENST00000482192 NUP93Q8N1F7 819 aa12.62□□□□□ -0.39
HMGN1-213ENST00000482192 TTC39CQ8N584 583 aa12.62□□□□□ -0.39
HMGN1-213ENST00000482192 TRIML1Q8N9V2 468 aa12.62□□□□□ -0.39
HMGN1-213ENST00000482192 SLC2A14Q8TDB8 520 aa12.62□□□□□ -0.39
HMGN1-213ENST00000482192 SEMA4DQ92854 862 aa12.62□□□□□ -0.39
HMGN1-213ENST00000482192 SLC35C1Q96A29 364 aa12.62□□□□□ -0.39
HMGN1-213ENST00000482192 CLDN23Q96B33 292 aa12.62□□□□□ -0.39
HMGN1-213ENST00000482192 ZFYVE19Q96K21 471 aa12.62□□□□□ -0.39
HMGN1-213ENST00000482192 SLITRK1Q96PX8 696 aa12.62□□□□□ -0.39
HMGN1-213ENST00000482192 KCNK16Q96T55 309 aa12.62□□□□□ -0.39
HMGN1-213ENST00000482192 NT5C1AQ9BXI3 368 aa12.62□□□□□ -0.39
HMGN1-213ENST00000482192 C8orf33Q9H7E9 229 aaPredicted RBP12.62□□□□□ -0.39
HMGN1-213ENST00000482192 FAM86C1Q9NVL1 165 aa12.62□□□□□ -0.39
HMGN1-213ENST00000482192 ZDBF2Q9HCK1 2354 aa12.62□□□□□ -0.39
HMGN1-213ENST00000482192 MUC6Q6W4X9 2439 aa12.61□□□□□ -0.39
HMGN1-213ENST00000482192 C2orf78A6NCI8 922 aa12.61□□□□□ -0.39
HMGN1-213ENST00000482192 ZNF840PA6NDX5 716 aa12.61□□□□□ -0.39
HMGN1-213ENST00000482192 PPP1R3GB7ZBB8 358 aa12.61□□□□□ -0.39
HMGN1-213ENST00000482192 CILPO75339 1184 aa12.61□□□□□ -0.39
HMGN1-213ENST00000482192 AP1G2O75843 785 aa12.61□□□□□ -0.39
HMGN1-213ENST00000482192 CCDC130P13994 396 aa12.61□□□□□ -0.39
HMGN1-213ENST00000482192 HDCP19113 662 aa12.61□□□□□ -0.39
HMGN1-213ENST00000482192 CD58P19256 250 aa12.61□□□□□ -0.39
HMGN1-213ENST00000482192 YWHAQP27348 245 aa12.61□□□□□ -0.39
HMGN1-213ENST00000482192 RPS9P46781 194 aaKnown RBP12.61□□□□□ -0.39
HMGN1-213ENST00000482192 TAF10Q12962 218 aa12.61□□□□□ -0.39
HMGN1-213ENST00000482192 CBWD6Q4V339 395 aa12.61□□□□□ -0.39
HMGN1-213ENST00000482192 CBWD3Q5JTY5 395 aa12.61□□□□□ -0.39
HMGN1-213ENST00000482192 CBWD5Q5RIA9 395 aa12.61□□□□□ -0.39
HMGN1-213ENST00000482192 KLHL10Q6JEL2 608 aa12.61□□□□□ -0.39
HMGN1-213ENST00000482192 TTI2Q6NXR4 508 aa12.61□□□□□ -0.39
HMGN1-213ENST00000482192 FRMD5Q7Z6J6 570 aa12.61□□□□□ -0.39
HMGN1-213ENST00000482192 FILIP1Q7Z7B0 1213 aa12.61□□□□□ -0.39
HMGN1-213ENST00000482192 RALGPS2Q86X27 583 aaPredicted RBP12.61□□□□□ -0.39
HMGN1-213ENST00000482192 C1orf210Q8IVY1 113 aa12.61□□□□□ -0.39
HMGN1-213ENST00000482192 PDZD8Q8NEN9 1154 aa12.61□□□□□ -0.39
HMGN1-213ENST00000482192 NELFBQ8WX92 580 aa12.61□□□□□ -0.39
HMGN1-213ENST00000482192 TWNKQ96RR1 684 aa12.61□□□□□ -0.39
HMGN1-213ENST00000482192 SLC22A12Q96S37 553 aa12.61□□□□□ -0.39
HMGN1-213ENST00000482192 CYP2S1Q96SQ9 504 aa12.61□□□□□ -0.39
HMGN1-213ENST00000482192 FAM83CQ9BQN1 747 aa12.61□□□□□ -0.39
HMGN1-213ENST00000482192 FAM124BQ9H5Z6 455 aaPredicted RBP12.61□□□□□ -0.39
HMGN1-213ENST00000482192 FAM49BQ9NUQ9 324 aa12.61□□□□□ -0.39
HMGN1-213ENST00000482192 GTSE1Q9NYZ3 720 aa12.61□□□□□ -0.39
HMGN1-213ENST00000482192 GCNT4Q9P109 453 aa12.61□□□□□ -0.39
HMGN1-213ENST00000482192 NDRG2Q9UN36 371 aaKnown RBP12.61□□□□□ -0.39
HMGN1-213ENST00000482192 CTNND2Q9UQB3 1225 aa12.61□□□□□ -0.39
HMGN1-213ENST00000482192 COQ4Q9Y3A0 265 aa12.61□□□□□ -0.39
HMGN1-213ENST00000482192 OBSL1O75147 1896 aa12.6□□□□□ -0.39
HMGN1-213ENST00000482192 SPECC1L-ADORA2AF8WAN1 911 aa12.6□□□□□ -0.39
HMGN1-213ENST00000482192 FAM200BP0CF97 657 aa12.6□□□□□ -0.39
HMGN1-213ENST00000482192 CTHP32929 405 aa12.6□□□□□ -0.39
HMGN1-213ENST00000482192 MRE11P49959 708 aa12.6□□□□□ -0.39
HMGN1-213ENST00000482192 SLC5A3P53794 718 aa12.6□□□□□ -0.39
HMGN1-213ENST00000482192 TNK2Q07912 1038 aa12.6□□□□□ -0.39
HMGN1-213ENST00000482192 IFRD2Q12894 506 aaPredicted RBP12.6□□□□□ -0.39
HMGN1-213ENST00000482192 PAK1Q13153 545 aa12.6□□□□□ -0.39
HMGN1-213ENST00000482192 MTF1Q14872 753 aa12.6□□□□□ -0.39
HMGN1-213ENST00000482192 PDGFRLQ15198 375 aa12.6□□□□□ -0.39
HMGN1-213ENST00000482192 ZNF77Q15935 545 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms