RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 GALNT1Q10472 559 aaPredicted RBP6.81□□□□□ -1.32
SF3B1-210ENST00000482158 STARD3Q14849 445 aa6.81□□□□□ -1.32
SF3B1-210ENST00000482158 LSM12Q3MHD2 195 aaKnown RBP6.81□□□□□ -1.32
SF3B1-210ENST00000482158 MANEALQ5VSG8 457 aa6.81□□□□□ -1.32
SF3B1-210ENST00000482158 RAP1GAP2Q684P5 730 aa6.81□□□□□ -1.32
SF3B1-210ENST00000482158 VWA1Q6PCB0 445 aa6.81□□□□□ -1.32
SF3B1-210ENST00000482158 SLC15A3Q8IY34 581 aa6.81□□□□□ -1.32
SF3B1-210ENST00000482158 SYNE4Q8N205 404 aa6.81□□□□□ -1.32
SF3B1-210ENST00000482158 MYCBPAPQ8TBZ2 947 aa6.81□□□□□ -1.32
SF3B1-210ENST00000482158 PROKR1Q8TCW9 393 aa6.81□□□□□ -1.32
SF3B1-210ENST00000482158 CHMP4AQ9BY43 222 aa6.81□□□□□ -1.32
SF3B1-210ENST00000482158 WDR11Q9BZH6 1224 aa6.81□□□□□ -1.32
SF3B1-210ENST00000482158 TPSD1Q9BZJ3 242 aa6.81□□□□□ -1.32
SF3B1-210ENST00000482158 FAM83DQ9H4H8 585 aa6.81□□□□□ -1.32
SF3B1-210ENST00000482158 SERHL2Q9H4I8 314 aa6.81□□□□□ -1.32
SF3B1-210ENST00000482158 TM7SF3Q9NS93 570 aa6.81□□□□□ -1.32
SF3B1-210ENST00000482158 IGSF9Q9P2J2 1179 aa6.81□□□□□ -1.32
SF3B1-210ENST00000482158 AQP7P3A6NL99 342 aa6.8□□□□□ -1.32
SF3B1-210ENST00000482158 ZAR1LA6NP61 321 aa6.8□□□□□ -1.32
SF3B1-210ENST00000482158 VWC2LB2RUY7 222 aa6.8□□□□□ -1.32
SF3B1-210ENST00000482158 PODXLO00592 558 aa6.8□□□□□ -1.32
SF3B1-210ENST00000482158 FFAR2O15552 330 aa6.8□□□□□ -1.32
SF3B1-210ENST00000482158 SRGAP2O75044 1071 aa6.8□□□□□ -1.32
SF3B1-210ENST00000482158 PPFIA4O75335 1185 aa6.8□□□□□ -1.32
SF3B1-210ENST00000482158 ADRB1P08588 477 aa6.8□□□□□ -1.32
SF3B1-210ENST00000482158 ITGAMP11215 1152 aa6.8□□□□□ -1.32
SF3B1-210ENST00000482158 ATICP31939 592 aa6.8□□□□□ -1.32
SF3B1-210ENST00000482158 ZEB1P37275 1124 aaPredicted RBP6.8□□□□□ -1.32
SF3B1-210ENST00000482158 PRKAG1P54619 331 aa6.8□□□□□ -1.32
SF3B1-210ENST00000482158 FHL3Q13643 280 aa6.8□□□□□ -1.32
SF3B1-210ENST00000482158 TRIM14Q14142 442 aa6.8□□□□□ -1.32
SF3B1-210ENST00000482158 PUM3Q15397 648 aaKnown RBP6.8□□□□□ -1.32
SF3B1-210ENST00000482158 RAB30Q15771 203 aa6.8□□□□□ -1.32
SF3B1-210ENST00000482158 ZNF527Q8NB42 609 aa6.8□□□□□ -1.32
SF3B1-210ENST00000482158 SNX27Q96L92 541 aa6.8□□□□□ -1.32
SF3B1-210ENST00000482158 ZNF747Q9BV97 191 aa6.8□□□□□ -1.32
SF3B1-210ENST00000482158 TBCCD1Q9NVR7 557 aa6.8□□□□□ -1.32
SF3B1-210ENST00000482158 VPS51Q9UID3 782 aa6.8□□□□□ -1.32
SF3B1-210ENST00000482158 SNX14Q9Y5W7 946 aa6.8□□□□□ -1.32
SF3B1-210ENST00000482158 AGPSO00116 658 aa6.79□□□□□ -1.32
SF3B1-210ENST00000482158 RHOP08100 348 aa6.79□□□□□ -1.32
SF3B1-210ENST00000482158 HGFP14210 728 aa6.79□□□□□ -1.32
SF3B1-210ENST00000482158 EGR1P18146 543 aa6.79□□□□□ -1.32
SF3B1-210ENST00000482158 PDE6CP51160 858 aa6.79□□□□□ -1.32
SF3B1-210ENST00000482158 DHX8Q14562 1220 aaKnown RBP6.79□□□□□ -1.32
SF3B1-210ENST00000482158 LY6KQ17RY6 165 aa6.79□□□□□ -1.32
SF3B1-210ENST00000482158 GGT6Q6P531 493 aa6.79□□□□□ -1.32
SF3B1-210ENST00000482158 CCDC174Q6PII3 467 aa6.79□□□□□ -1.32
SF3B1-210ENST00000482158 KCNV1Q6PIU1 500 aa6.79□□□□□ -1.32
SF3B1-210ENST00000482158 DTX2Q86UW9 622 aa6.79□□□□□ -1.32
SF3B1-210ENST00000482158 SPARTQ8N0X7 666 aa6.79□□□□□ -1.32
SF3B1-210ENST00000482158 ABRAQ8N0Z2 381 aa6.79□□□□□ -1.32
SF3B1-210ENST00000482158 IPO4Q8TEX9 1081 aaKnown RBP6.79□□□□□ -1.32
SF3B1-210ENST00000482158 FAM227BQ96M60 508 aa6.79□□□□□ -1.32
SF3B1-210ENST00000482158 Q96MF0 132 aa6.79□□□□□ -1.32
SF3B1-210ENST00000482158 KRTAP4-5Q9BYR2 181 aa6.79□□□□□ -1.32
SF3B1-210ENST00000482158 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.79□□□□□ -1.32
SF3B1-210ENST00000482158 PCDHAC1Q9H158 963 aa6.79□□□□□ -1.32
SF3B1-210ENST00000482158 MYH16Q9H6N6 1097 aa6.79□□□□□ -1.32
SF3B1-210ENST00000482158 MMRN2Q9H8L6 949 aa6.79□□□□□ -1.32
SF3B1-210ENST00000482158 NECTIN3Q9NQS3 549 aa6.79□□□□□ -1.32
SF3B1-210ENST00000482158 KCTD5Q9NXV2 234 aa6.79□□□□□ -1.32
SF3B1-210ENST00000482158 ZMYND8Q9ULU4 1186 aaPredicted RBP6.79□□□□□ -1.32
SF3B1-210ENST00000482158 HPSEQ9Y251 543 aa6.79□□□□□ -1.32
SF3B1-210ENST00000482158 COL4A3Q01955 1670 aa6.79□□□□□ -1.32
SF3B1-210ENST00000482158 ADGRA2Q96PE1 1338 aa6.78□□□□□ -1.32
SF3B1-210ENST00000482158 WDR27A2RRH5 827 aa6.78□□□□□ -1.32
SF3B1-210ENST00000482158 GOLGA6L3A6NEY3 463 aa6.78□□□□□ -1.32
SF3B1-210ENST00000482158 B8ZZF3 427 aa6.78□□□□□ -1.32
SF3B1-210ENST00000482158 NPC1O15118 1278 aa6.78□□□□□ -1.32
SF3B1-210ENST00000482158 RGS10O43665 173 aa6.78□□□□□ -1.32
SF3B1-210ENST00000482158 NARSO43776 548 aaKnown RBP6.78□□□□□ -1.32
SF3B1-210ENST00000482158 UQCRC1P31930 480 aa6.78□□□□□ -1.32
SF3B1-210ENST00000482158 ATXN1P54253 815 aaKnown RBP6.78□□□□□ -1.32
SF3B1-210ENST00000482158 BCAT1P54687 386 aa6.78□□□□□ -1.32
SF3B1-210ENST00000482158 CCNIQ14094 377 aa6.78□□□□□ -1.32
SF3B1-210ENST00000482158 LY6G5CQ5SRR4 150 aa6.78□□□□□ -1.32
SF3B1-210ENST00000482158 TMTC4Q5T4D3 741 aa6.78□□□□□ -1.32
SF3B1-210ENST00000482158 GORABQ5T7V8 394 aa6.78□□□□□ -1.32
SF3B1-210ENST00000482158 DEPDC1Q5TB30 811 aa6.78□□□□□ -1.32
SF3B1-210ENST00000482158 ABHD17BQ5VST6 288 aa6.78□□□□□ -1.32
SF3B1-210ENST00000482158 KIAA0895LQ68EN5 471 aa6.78□□□□□ -1.32
SF3B1-210ENST00000482158 PGBD2Q6P3X8 592 aa6.78□□□□□ -1.32
SF3B1-210ENST00000482158 USP17L6PQ6QN14 398 aa6.78□□□□□ -1.32
SF3B1-210ENST00000482158 MAVSQ7Z434 540 aa6.78□□□□□ -1.32
SF3B1-210ENST00000482158 CCDC28AQ8IWP9 274 aa6.78□□□□□ -1.32
SF3B1-210ENST00000482158 B3GALNT2Q8NCR0 500 aa6.78□□□□□ -1.32
SF3B1-210ENST00000482158 CCDC150Q8NCX0 1101 aa6.78□□□□□ -1.32
SF3B1-210ENST00000482158 MUL1Q969V5 352 aa6.78□□□□□ -1.32
SF3B1-210ENST00000482158 ZBTB45Q96K62 511 aaPredicted RBP6.78□□□□□ -1.32
SF3B1-210ENST00000482158 GPR20Q99678 358 aa6.78□□□□□ -1.32
SF3B1-210ENST00000482158 PPCSQ9HAB8 311 aa6.78□□□□□ -1.32
SF3B1-210ENST00000482158 MAGED2Q9UNF1 606 aaPredicted RBP6.78□□□□□ -1.32
SF3B1-210ENST00000482158 REXO2Q9Y3B8 237 aaKnown RBP6.78□□□□□ -1.32
SF3B1-210ENST00000482158 LGALS16A8MUM7 142 aa6.77□□□□□ -1.33
SF3B1-210ENST00000482158 NBNO60934 754 aa6.77□□□□□ -1.33
SF3B1-210ENST00000482158 ARP10275 920 aa6.77□□□□□ -1.33
SF3B1-210ENST00000482158 PECAM1P16284 738 aaPredicted RBP6.77□□□□□ -1.33
SF3B1-210ENST00000482158 MST1P26927 711 aa6.77□□□□□ -1.33
SF3B1-210ENST00000482158 TIAL1Q01085 375 aaKnown RBP eCLIP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms