RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 PLVAPQ9BX97 442 aa18.54■□□□□ 0.56
UPF3A-206ENST00000480362 UBXN6Q9BZV1 441 aa18.54■□□□□ 0.56
UPF3A-206ENST00000480362 MIS12Q9H081 205 aa18.54■□□□□ 0.56
UPF3A-206ENST00000480362 ZBP1Q9H171 429 aa18.54■□□□□ 0.56
UPF3A-206ENST00000480362 CSNK1G1Q9HCP0 422 aa18.54■□□□□ 0.56
UPF3A-206ENST00000480362 WDR35Q9P2L0 1181 aa18.54■□□□□ 0.56
UPF3A-206ENST00000480362 UVRAGQ9P2Y5 699 aa18.54■□□□□ 0.56
UPF3A-206ENST00000480362 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.53■□□□□ 0.56
UPF3A-206ENST00000480362 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.53■□□□□ 0.56
UPF3A-206ENST00000480362 TCRBV5S1A1TA0A578 114 aa18.53■□□□□ 0.56
UPF3A-206ENST00000480362 GOLGA8SH3BPF8 625 aa18.53■□□□□ 0.56
UPF3A-206ENST00000480362 LCP1P13796 627 aa18.53■□□□□ 0.56
UPF3A-206ENST00000480362 TNNT1P13805 278 aa18.53■□□□□ 0.56
UPF3A-206ENST00000480362 DNAJB2P25686 324 aa18.53■□□□□ 0.56
UPF3A-206ENST00000480362 ACADSBP45954 432 aa18.53■□□□□ 0.56
UPF3A-206ENST00000480362 ETF1P62495 437 aaKnown RBP18.53■□□□□ 0.56
UPF3A-206ENST00000480362 SMARCB1Q12824 385 aa18.53■□□□□ 0.56
UPF3A-206ENST00000480362 MAMLD1Q13495 774 aa18.53■□□□□ 0.56
UPF3A-206ENST00000480362 CFAP221Q4G0U5 840 aa18.53■□□□□ 0.56
UPF3A-206ENST00000480362 OR6B2Q6IFH4 312 aa18.53■□□□□ 0.56
UPF3A-206ENST00000480362 SPRED2Q7Z698 418 aa18.53■□□□□ 0.56
UPF3A-206ENST00000480362 NLRC5Q86WI3 1866 aa18.53■□□□□ 0.56
UPF3A-206ENST00000480362 SLC35F6Q8N357 371 aa18.53■□□□□ 0.56
UPF3A-206ENST00000480362 ATAD1Q8NBU5 361 aa18.53■□□□□ 0.56
UPF3A-206ENST00000480362 TPCN2Q8NHX9 752 aa18.53■□□□□ 0.56
UPF3A-206ENST00000480362 KCTD13Q8WZ19 329 aa18.53■□□□□ 0.56
UPF3A-206ENST00000480362 FUBP3Q96I24 572 aaKnown RBP eCLIP18.53■□□□□ 0.56
UPF3A-206ENST00000480362 MRPL47Q9HD33 250 aaKnown RBP18.53■□□□□ 0.56
UPF3A-206ENST00000480362 ALG13Q9NP73 1137 aaKnown RBP18.53■□□□□ 0.56
UPF3A-206ENST00000480362 DMAP1Q9NPF5 467 aaPredicted RBP18.53■□□□□ 0.56
UPF3A-206ENST00000480362 CYLDQ9NQC7 956 aa18.53■□□□□ 0.56
UPF3A-206ENST00000480362 MRPL17Q9NRX2 175 aaKnown RBP18.53■□□□□ 0.56
UPF3A-206ENST00000480362 PARVAQ9NVD7 372 aa18.53■□□□□ 0.56
UPF3A-206ENST00000480362 CAPN6Q9Y6Q1 641 aa18.53■□□□□ 0.56
UPF3A-206ENST00000480362 SCINQ9Y6U3 715 aa18.53■□□□□ 0.56
UPF3A-206ENST00000480362 MTMR11A4FU01 709 aa18.52■□□□□ 0.56
UPF3A-206ENST00000480362 HHLA1C9JL84 531 aa18.52■□□□□ 0.56
UPF3A-206ENST00000480362 C5orf67F2Z3F1 127 aa18.52■□□□□ 0.56
UPF3A-206ENST00000480362 MTA2O94776 668 aa18.52■□□□□ 0.56
UPF3A-206ENST00000480362 GJB6O95452 261 aa18.52■□□□□ 0.56
UPF3A-206ENST00000480362 TUBB4AP04350 444 aa18.52■□□□□ 0.56
UPF3A-206ENST00000480362 RB1P06400 928 aa18.52■□□□□ 0.56
UPF3A-206ENST00000480362 CTSAP10619 480 aa18.52■□□□□ 0.56
UPF3A-206ENST00000480362 GRIK1P39086 918 aa18.52■□□□□ 0.56
UPF3A-206ENST00000480362 HADHBP55084 474 aaKnown RBP18.52■□□□□ 0.56
UPF3A-206ENST00000480362 GSCP56915 257 aaPredicted RBP18.52■□□□□ 0.56
UPF3A-206ENST00000480362 ROR1Q01973 937 aa18.52■□□□□ 0.56
UPF3A-206ENST00000480362 DNAJC24Q6P3W2 148 aa18.52■□□□□ 0.56
UPF3A-206ENST00000480362 FAM183BPQ6ZVS7 135 aa18.52■□□□□ 0.56
UPF3A-206ENST00000480362 SCN4BQ8IWT1 228 aa18.52■□□□□ 0.56
UPF3A-206ENST00000480362 SCUBE3Q8IX30 993 aa18.52■□□□□ 0.56
UPF3A-206ENST00000480362 GPR65Q8IYL9 337 aa18.52■□□□□ 0.56
UPF3A-206ENST00000480362 C3orf20Q8ND61 904 aa18.52■□□□□ 0.56
UPF3A-206ENST00000480362 FEZF2Q8TBJ5 459 aa18.52■□□□□ 0.56
UPF3A-206ENST00000480362 ZNF564Q8TBZ8 553 aaPredicted RBP18.52■□□□□ 0.56
UPF3A-206ENST00000480362 SPPL3Q8TCT6 385 aa18.52■□□□□ 0.56
UPF3A-206ENST00000480362 SPPL2BQ8TCT7 592 aa18.52■□□□□ 0.56
UPF3A-206ENST00000480362 MCRS1Q96EZ8 462 aa18.52■□□□□ 0.56
UPF3A-206ENST00000480362 SELENOOQ9BVL4 669 aa18.52■□□□□ 0.56
UPF3A-206ENST00000480362 LRRC4Q9HBW1 653 aa18.52■□□□□ 0.56
UPF3A-206ENST00000480362 MTUS1Q9ULD2 1270 aa18.52■□□□□ 0.56
UPF3A-206ENST00000480362 LZTS1Q9Y250 596 aa18.52■□□□□ 0.56
UPF3A-206ENST00000480362 SSX2IPQ9Y2D8 614 aa18.52■□□□□ 0.56
UPF3A-206ENST00000480362 YBX2Q9Y2T7 364 aaKnown RBP18.52■□□□□ 0.56
UPF3A-206ENST00000480362 WDR27A2RRH5 827 aa18.51■□□□□ 0.55
UPF3A-206ENST00000480362 SIGLEC16A6NMB1 481 aa18.51■□□□□ 0.55
UPF3A-206ENST00000480362 F8VP50 259 aa18.51■□□□□ 0.55
UPF3A-206ENST00000480362 KIF2AO00139 706 aaPredicted RBP18.51■□□□□ 0.55
UPF3A-206ENST00000480362 PAPSS1O43252 624 aaPredicted RBP18.51■□□□□ 0.55
UPF3A-206ENST00000480362 LILRB3O75022 631 aa18.51■□□□□ 0.55
UPF3A-206ENST00000480362 PALMO75781 387 aa18.51■□□□□ 0.55
UPF3A-206ENST00000480362 VNN2O95498 520 aa18.51■□□□□ 0.55
UPF3A-206ENST00000480362 CXCL14O95715 111 aa18.51■□□□□ 0.55
UPF3A-206ENST00000480362 BMP8BP34820 402 aa18.51■□□□□ 0.55
UPF3A-206ENST00000480362 CA8P35219 290 aa18.51■□□□□ 0.55
UPF3A-206ENST00000480362 PBX2P40425 430 aa18.51■□□□□ 0.55
UPF3A-206ENST00000480362 VSTM1Q6UX27 236 aa18.51■□□□□ 0.55
UPF3A-206ENST00000480362 SYT10Q6XYQ8 523 aa18.51■□□□□ 0.55
UPF3A-206ENST00000480362 TMC7Q7Z402 723 aa18.51■□□□□ 0.55
UPF3A-206ENST00000480362 TRIM58Q8NG06 486 aa18.51■□□□□ 0.55
UPF3A-206ENST00000480362 C2orf15Q8WU43 125 aaKnown RBP18.51■□□□□ 0.55
UPF3A-206ENST00000480362 CALR3Q96L12 384 aaKnown RBP18.51■□□□□ 0.55
UPF3A-206ENST00000480362 SAMD11Q96NU1 681 aa18.51■□□□□ 0.55
UPF3A-206ENST00000480362 ALS2CR12Q96Q35 445 aa18.51■□□□□ 0.55
UPF3A-206ENST00000480362 TGS1Q96RS0 853 aaKnown RBP18.51■□□□□ 0.55
UPF3A-206ENST00000480362 WDR24Q96S15 920 aa18.51■□□□□ 0.55
UPF3A-206ENST00000480362 ABCB6Q9NP58 842 aa18.51■□□□□ 0.55
UPF3A-206ENST00000480362 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.51■□□□□ 0.55
UPF3A-206ENST00000480362 DNAI1Q9UI46 699 aa18.51■□□□□ 0.55
UPF3A-206ENST00000480362 SLC27A5Q9Y2P5 690 aa18.51■□□□□ 0.55
UPF3A-206ENST00000480362 PLXNA4Q9HCM2 1894 aa18.51■□□□□ 0.55
UPF3A-206ENST00000480362 MYH10P35580 1976 aa18.51■□□□□ 0.55
UPF3A-206ENST00000480362 GBF1Q92538 1859 aa18.5■□□□□ 0.55
UPF3A-206ENST00000480362 GRID2IPA4D2P6 1211 aa18.5■□□□□ 0.55
UPF3A-206ENST00000480362 KRT3P12035 628 aa18.5■□□□□ 0.55
UPF3A-206ENST00000480362 MAGEA11P43364 429 aa18.5■□□□□ 0.55
UPF3A-206ENST00000480362 RGS19P49795 217 aa18.5■□□□□ 0.55
UPF3A-206ENST00000480362 TKTL1P51854 596 aa18.5■□□□□ 0.55
UPF3A-206ENST00000480362 ERVFC1P60507 584 aa18.5■□□□□ 0.55
UPF3A-206ENST00000480362 SLC6A3Q01959 620 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms