RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 PRR23AA6NEV1 266 aa16.31■□□□□ 0.2
CDK9-203ENST00000480353 ARNTLO00327 626 aa16.31■□□□□ 0.2
CDK9-203ENST00000480353 CLDN5O00501 218 aa16.31■□□□□ 0.2
CDK9-203ENST00000480353 KINO60870 393 aaKnown RBP16.31■□□□□ 0.2
CDK9-203ENST00000480353 AKAP3O75969 853 aa16.31■□□□□ 0.2
CDK9-203ENST00000480353 RTN3O95197 1032 aaPredicted RBP16.31■□□□□ 0.2
CDK9-203ENST00000480353 VNN1O95497 513 aa16.31■□□□□ 0.2
CDK9-203ENST00000480353 HDCP19113 662 aa16.31■□□□□ 0.2
CDK9-203ENST00000480353 CTHP32929 405 aa16.31■□□□□ 0.2
CDK9-203ENST00000480353 GCLMP48507 274 aa16.31■□□□□ 0.2
CDK9-203ENST00000480353 TNK2Q07912 1038 aa16.31■□□□□ 0.2
CDK9-203ENST00000480353 RUNX3Q13761 415 aa16.31■□□□□ 0.2
CDK9-203ENST00000480353 ZNF268Q14587 947 aaPredicted RBP16.31■□□□□ 0.2
CDK9-203ENST00000480353 EDRF1Q3B7T1 1238 aa16.31■□□□□ 0.2
CDK9-203ENST00000480353 DGKKQ5KSL6 1271 aa16.31■□□□□ 0.2
CDK9-203ENST00000480353 ZNF658Q5TYW1 1059 aaPredicted RBP16.31■□□□□ 0.2
CDK9-203ENST00000480353 TCERG1LQ5VWI1 586 aa16.31■□□□□ 0.2
CDK9-203ENST00000480353 ARL14EPQ8N8R7 260 aaPredicted RBP16.31■□□□□ 0.2
CDK9-203ENST00000480353 ELMO3Q96BJ8 720 aa16.31■□□□□ 0.2
CDK9-203ENST00000480353 LRRC3BQ96PB8 259 aa16.31■□□□□ 0.2
CDK9-203ENST00000480353 ZNF518BQ9C0D4 1074 aa16.31■□□□□ 0.2
CDK9-203ENST00000480353 EBF3Q9H4W6 596 aa16.31■□□□□ 0.2
CDK9-203ENST00000480353 CACNA1IQ9P0X4 2223 aa16.31■□□□□ 0.2
CDK9-203ENST00000480353 PIEZO1Q92508 2521 aa16.3■□□□□ 0.2
CDK9-203ENST00000480353 LMNAP02545 664 aaKnown RBP16.3■□□□□ 0.2
CDK9-203ENST00000480353 CCR3P51677 355 aa16.3■□□□□ 0.2
CDK9-203ENST00000480353 NOP14P78316 857 aaKnown RBP16.3■□□□□ 0.2
CDK9-203ENST00000480353 MTAPQ13126 283 aa16.3■□□□□ 0.2
CDK9-203ENST00000480353 MTF1Q14872 753 aa16.3■□□□□ 0.2
CDK9-203ENST00000480353 PON2Q15165 354 aa16.3■□□□□ 0.2
CDK9-203ENST00000480353 PDGFRLQ15198 375 aa16.3■□□□□ 0.2
CDK9-203ENST00000480353 ZNF528Q3MIS6 628 aa16.3■□□□□ 0.2
CDK9-203ENST00000480353 ASCL5Q7RTU5 278 aa16.3■□□□□ 0.2
CDK9-203ENST00000480353 ACOT1Q86TX2 421 aa16.3■□□□□ 0.2
CDK9-203ENST00000480353 NUP93Q8N1F7 819 aa16.3■□□□□ 0.2
CDK9-203ENST00000480353 CPA6Q8N4T0 437 aa16.3■□□□□ 0.2
CDK9-203ENST00000480353 SMARCD1Q96GM5 515 aa16.3■□□□□ 0.2
CDK9-203ENST00000480353 CYP2S1Q96SQ9 504 aa16.3■□□□□ 0.2
CDK9-203ENST00000480353 B3GNT5Q9BYG0 378 aa16.3■□□□□ 0.2
CDK9-203ENST00000480353 CHRDQ9H2X0 955 aa16.3■□□□□ 0.2
CDK9-203ENST00000480353 TMEM8AQ9HCN3 771 aa16.3■□□□□ 0.2
CDK9-203ENST00000480353 DUS2Q9NX74 493 aaKnown RBP16.3■□□□□ 0.2
CDK9-203ENST00000480353 C2orf78A6NCI8 922 aa16.29■□□□□ 0.2
CDK9-203ENST00000480353 TADA3O75528 432 aa16.29■□□□□ 0.2
CDK9-203ENST00000480353 AP1G2O75843 785 aa16.29■□□□□ 0.2
CDK9-203ENST00000480353 ASS1P00966 412 aaKnown RBP16.29■□□□□ 0.2
CDK9-203ENST00000480353 PFKLP17858 780 aa16.29■□□□□ 0.2
CDK9-203ENST00000480353 YWHAQP27348 245 aa16.29■□□□□ 0.2
CDK9-203ENST00000480353 PRCPP42785 496 aa16.29■□□□□ 0.2
CDK9-203ENST00000480353 NDST1P52848 882 aa16.29■□□□□ 0.2
CDK9-203ENST00000480353 NRLP54845 237 aa16.29■□□□□ 0.2
CDK9-203ENST00000480353 ENPEPQ07075 957 aa16.29■□□□□ 0.2
CDK9-203ENST00000480353 NR1H3Q13133 447 aa16.29■□□□□ 0.2
CDK9-203ENST00000480353 DCAF17Q5H9S7 520 aaPredicted RBP16.29■□□□□ 0.2
CDK9-203ENST00000480353 WDR44Q5JSH3 913 aa16.29■□□□□ 0.2
CDK9-203ENST00000480353 KRT39Q6A163 491 aa16.29■□□□□ 0.2
CDK9-203ENST00000480353 TRIM68Q6AZZ1 485 aa16.29■□□□□ 0.2
CDK9-203ENST00000480353 SPOPLQ6IQ16 392 aa16.29■□□□□ 0.2
CDK9-203ENST00000480353 FAM35AQ86V20 835 aa16.29■□□□□ 0.2
CDK9-203ENST00000480353 UNC93AQ86WB7 457 aa16.29■□□□□ 0.2
CDK9-203ENST00000480353 ADSSL1Q8N142 457 aa16.29■□□□□ 0.2
CDK9-203ENST00000480353 PDZD8Q8NEN9 1154 aa16.29■□□□□ 0.2
CDK9-203ENST00000480353 ATP2A3Q93084 1043 aa16.29■□□□□ 0.2
CDK9-203ENST00000480353 FBXO32Q969P5 355 aa16.29■□□□□ 0.2
CDK9-203ENST00000480353 TIGD1Q96MW7 591 aa16.29■□□□□ 0.2
CDK9-203ENST00000480353 DMAP1Q9NPF5 467 aaPredicted RBP16.29■□□□□ 0.2
CDK9-203ENST00000480353 NME7Q9Y5B8 376 aa16.29■□□□□ 0.2
CDK9-203ENST00000480353 F5P12259 2224 aa16.29■□□□□ 0.2
CDK9-203ENST00000480353 CHRNB1P11230 501 aa16.28■□□□□ 0.2
CDK9-203ENST00000480353 CD58P19256 250 aa16.28■□□□□ 0.2
CDK9-203ENST00000480353 GTF2H1P32780 548 aa16.28■□□□□ 0.2
CDK9-203ENST00000480353 MXI1P50539 228 aa16.28■□□□□ 0.2
CDK9-203ENST00000480353 USP46P62068 366 aa16.28■□□□□ 0.2
CDK9-203ENST00000480353 GRSF1Q12849 480 aaKnown RBP eCLIP16.28■□□□□ 0.2
CDK9-203ENST00000480353 TAF10Q12962 218 aa16.28■□□□□ 0.2
CDK9-203ENST00000480353 SH3RF2Q8TEC5 729 aa16.28■□□□□ 0.2
CDK9-203ENST00000480353 ERCC4Q92889 916 aaPredicted RBP16.28■□□□□ 0.2
CDK9-203ENST00000480353 EEF2KMTQ96G04 330 aa16.28■□□□□ 0.2
CDK9-203ENST00000480353 FAM83CQ9BQN1 747 aa16.28■□□□□ 0.2
CDK9-203ENST00000480353 TTLL2Q9BWV7 592 aa16.28■□□□□ 0.2
CDK9-203ENST00000480353 NIF3L1Q9GZT8 377 aa16.28■□□□□ 0.2
CDK9-203ENST00000480353 NACA2Q9H009 215 aa16.28■□□□□ 0.2
CDK9-203ENST00000480353 KRT82Q9NSB4 513 aa16.28■□□□□ 0.2
CDK9-203ENST00000480353 FAM49BQ9NUQ9 324 aa16.28■□□□□ 0.2
CDK9-203ENST00000480353 ZSCAN32Q9NX65 697 aa16.28■□□□□ 0.2
CDK9-203ENST00000480353 PCDHGA2Q9Y5H1 932 aa16.28■□□□□ 0.2
CDK9-203ENST00000480353 PCDHA5Q9Y5H7 936 aa16.28■□□□□ 0.2
CDK9-203ENST00000480353 PSMA7O14818 248 aa16.27■□□□□ 0.2
CDK9-203ENST00000480353 MBL2P11226 248 aaPredicted RBP16.27■□□□□ 0.2
CDK9-203ENST00000480353 ADORA2BP29275 332 aa16.27■□□□□ 0.2
CDK9-203ENST00000480353 PPP1R2P41236 205 aa16.27■□□□□ 0.2
CDK9-203ENST00000480353 CXCL12P48061 93 aa16.27■□□□□ 0.2
CDK9-203ENST00000480353 FKBP3Q00688 224 aaKnown RBP16.27■□□□□ 0.2
CDK9-203ENST00000480353 PPP3CAQ08209 521 aa16.27■□□□□ 0.2
CDK9-203ENST00000480353 ORC1Q13415 861 aa16.27■□□□□ 0.2
CDK9-203ENST00000480353 TXNDC11Q6PKC3 985 aa16.27■□□□□ 0.2
CDK9-203ENST00000480353 TSSK4Q6SA08 328 aa16.27■□□□□ 0.2
CDK9-203ENST00000480353 ENGASEQ8NFI3 743 aa16.27■□□□□ 0.2
CDK9-203ENST00000480353 SLC2A14Q8TDB8 520 aa16.27■□□□□ 0.2
CDK9-203ENST00000480353 TAS1R2Q8TE23 839 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms