RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 KCNK16Q96T55 309 aa20.9■□□□□ 0.94
LIME1-205ENST00000480139 TTLL2Q9BWV7 592 aa20.9■□□□□ 0.94
LIME1-205ENST00000480139 UBXN6Q9BZV1 441 aa20.9■□□□□ 0.94
LIME1-205ENST00000480139 TSPAN16Q9UKR8 245 aa20.9■□□□□ 0.94
LIME1-205ENST00000480139 ZFP37Q9Y6Q3 630 aaPredicted RBP20.9■□□□□ 0.94
LIME1-205ENST00000480139 DENND4CQ5VZ89 1909 aa20.9■□□□□ 0.94
LIME1-205ENST00000480139 OBSL1O75147 1896 aa20.9■□□□□ 0.94
LIME1-205ENST00000480139 ZNF638Q14966 1978 aaKnown RBP20.89■□□□□ 0.93
LIME1-205ENST00000480139 F8VZ95 297 aa20.89■□□□□ 0.93
LIME1-205ENST00000480139 EPHB6O15197 1021 aa20.89■□□□□ 0.93
LIME1-205ENST00000480139 BEST1O76090 585 aa20.89■□□□□ 0.93
LIME1-205ENST00000480139 BCAT1P54687 386 aa20.89■□□□□ 0.93
LIME1-205ENST00000480139 JAM2P57087 298 aa20.89■□□□□ 0.93
LIME1-205ENST00000480139 POLR2FP61218 127 aaKnown RBP20.89■□□□□ 0.93
LIME1-205ENST00000480139 ZP2Q05996 745 aa20.89■□□□□ 0.93
LIME1-205ENST00000480139 SLC5A9Q2M3M2 681 aa20.89■□□□□ 0.93
LIME1-205ENST00000480139 OTOP3Q7RTS5 596 aa20.89■□□□□ 0.93
LIME1-205ENST00000480139 HS6ST3Q8IZP7 471 aa20.89■□□□□ 0.93
LIME1-205ENST00000480139 ZNF334Q9HCZ1 680 aaPredicted RBP20.89■□□□□ 0.93
LIME1-205ENST00000480139 COMMD8Q9NX08 183 aa20.89■□□□□ 0.93
LIME1-205ENST00000480139 HESX1Q9UBX0 185 aa20.89■□□□□ 0.93
LIME1-205ENST00000480139 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.89■□□□□ 0.93
LIME1-205ENST00000480139 MRPS23Q9Y3D9 190 aaKnown RBP20.89■□□□□ 0.93
LIME1-205ENST00000480139 DOCK8Q8NF50 2099 aa20.89■□□□□ 0.93
LIME1-205ENST00000480139 LOC730098B7Z3J9 87 aa20.88■□□□□ 0.93
LIME1-205ENST00000480139 TNFRSF10BO14763 440 aa20.88■□□□□ 0.93
LIME1-205ENST00000480139 MED7O43513 233 aa20.88■□□□□ 0.93
LIME1-205ENST00000480139 RTN3O95197 1032 aaPredicted RBP20.88■□□□□ 0.93
LIME1-205ENST00000480139 TPM3P06753 285 aa20.88■□□□□ 0.93
LIME1-205ENST00000480139 CDC25CP30307 473 aa20.88■□□□□ 0.93
LIME1-205ENST00000480139 GNA15P30679 374 aa20.88■□□□□ 0.93
LIME1-205ENST00000480139 PBX1P40424 430 aa20.88■□□□□ 0.93
LIME1-205ENST00000480139 USP8P40818 1118 aa20.88■□□□□ 0.93
LIME1-205ENST00000480139 CCR2P41597 374 aa20.88■□□□□ 0.93
LIME1-205ENST00000480139 MAP3K7CLP57077 242 aa20.88■□□□□ 0.93
LIME1-205ENST00000480139 SLC8A3P57103 927 aa20.88■□□□□ 0.93
LIME1-205ENST00000480139 BPIFB4P59827 614 aa20.88■□□□□ 0.93
LIME1-205ENST00000480139 MTMR3Q13615 1198 aa20.88■□□□□ 0.93
LIME1-205ENST00000480139 GOLGA7BQ2TAP0 167 aa20.88■□□□□ 0.93
LIME1-205ENST00000480139 PKDCCQ504Y2 493 aa20.88■□□□□ 0.93
LIME1-205ENST00000480139 TTC30AQ86WT1 665 aa20.88■□□□□ 0.93
LIME1-205ENST00000480139 NUP93Q8N1F7 819 aa20.88■□□□□ 0.93
LIME1-205ENST00000480139 ACSF2Q96CM8 615 aaPredicted RBP20.88■□□□□ 0.93
LIME1-205ENST00000480139 ZSWIM1Q9BR11 485 aa20.88■□□□□ 0.93
LIME1-205ENST00000480139 IL21Q9HBE4 155 aa20.88■□□□□ 0.93
LIME1-205ENST00000480139 IL37Q9NZH6 218 aa20.88■□□□□ 0.93
LIME1-205ENST00000480139 TCF20Q9UGU0 1960 aaKnown RBP20.88■□□□□ 0.93
LIME1-205ENST00000480139 C19orf67A6NJJ6 358 aa20.87■□□□□ 0.93
LIME1-205ENST00000480139 HHLA1C9JL84 531 aa20.87■□□□□ 0.93
LIME1-205ENST00000480139 CYP26A1O43174 497 aa20.87■□□□□ 0.93
LIME1-205ENST00000480139 MOSPD3O75425 235 aa20.87■□□□□ 0.93
LIME1-205ENST00000480139 SETSIPP0DME0 302 aa20.87■□□□□ 0.93
LIME1-205ENST00000480139 MYL4P12829 197 aa20.87■□□□□ 0.93
LIME1-205ENST00000480139 BRD2P25440 801 aaKnown RBP20.87■□□□□ 0.93
LIME1-205ENST00000480139 CLCN1P35523 988 aa20.87■□□□□ 0.93
LIME1-205ENST00000480139 PTK2Q05397 1052 aa20.87■□□□□ 0.93
LIME1-205ENST00000480139 BST2Q10589 180 aaKnown RBP20.87■□□□□ 0.93
LIME1-205ENST00000480139 GAREM2Q75VX8 874 aa20.87■□□□□ 0.93
LIME1-205ENST00000480139 GET4Q7L5D6 327 aaPredicted RBP20.87■□□□□ 0.93
LIME1-205ENST00000480139 TDRD5Q8NAT2 981 aaKnown RBP20.87■□□□□ 0.93
LIME1-205ENST00000480139 ITFG1Q8TB96 612 aa20.87■□□□□ 0.93
LIME1-205ENST00000480139 SHKBP1Q8TBC3 707 aa20.87■□□□□ 0.93
LIME1-205ENST00000480139 ZNF606Q8WXB4 792 aa20.87■□□□□ 0.93
LIME1-205ENST00000480139 GDE1Q9NZC3 331 aa20.87■□□□□ 0.93
LIME1-205ENST00000480139 IFNKQ9P0W0 207 aa20.87■□□□□ 0.93
LIME1-205ENST00000480139 CDH7Q9ULB5 785 aa20.87■□□□□ 0.93
LIME1-205ENST00000480139 C5orf42Q9H799 3197 aa20.87■□□□□ 0.93
LIME1-205ENST00000480139 FAM92AA1XBS5 289 aa20.86■□□□□ 0.93
LIME1-205ENST00000480139 SOBPA7XYQ1 873 aa20.86■□□□□ 0.93
LIME1-205ENST00000480139 XPO1O14980 1071 aaKnown RBP20.86■□□□□ 0.93
LIME1-205ENST00000480139 CBFA2T2O43439 604 aa20.86■□□□□ 0.93
LIME1-205ENST00000480139 F11P03951 625 aa20.86■□□□□ 0.93
LIME1-205ENST00000480139 GABRR2P28476 465 aa20.86■□□□□ 0.93
LIME1-205ENST00000480139 PPP3CCP48454 512 aa20.86■□□□□ 0.93
LIME1-205ENST00000480139 SLC5A3P53794 718 aa20.86■□□□□ 0.93
LIME1-205ENST00000480139 FIGNQ5HY92 759 aa20.86■□□□□ 0.93
LIME1-205ENST00000480139 NPAS3Q8IXF0 933 aa20.86■□□□□ 0.93
LIME1-205ENST00000480139 ZDHHC14Q8IZN3 488 aa20.86■□□□□ 0.93
LIME1-205ENST00000480139 PLCD3Q8N3E9 789 aa20.86■□□□□ 0.93
LIME1-205ENST00000480139 STKLD1Q8NE28 680 aa20.86■□□□□ 0.93
LIME1-205ENST00000480139 FGF13Q92913 245 aa20.86■□□□□ 0.93
LIME1-205ENST00000480139 TCEAL4Q96EI5 215 aa20.86■□□□□ 0.93
LIME1-205ENST00000480139 GCNAQ96QF7 691 aa20.86■□□□□ 0.93
LIME1-205ENST00000480139 SPAG5Q96R06 1193 aa20.86■□□□□ 0.93
LIME1-205ENST00000480139 EDEM3Q9BZQ6 932 aa20.86■□□□□ 0.93
LIME1-205ENST00000480139 NLRC4Q9NPP4 1024 aa20.86■□□□□ 0.93
LIME1-205ENST00000480139 EPS15L1Q9UBC2 864 aa20.86■□□□□ 0.93
LIME1-205ENST00000480139 ZMYM5Q9UJ78 669 aa20.86■□□□□ 0.93
LIME1-205ENST00000480139 MYO6Q9UM54 1294 aa20.86■□□□□ 0.93
LIME1-205ENST00000480139 MAGED2Q9UNF1 606 aaPredicted RBP20.86■□□□□ 0.93
LIME1-205ENST00000480139 NCANO14594 1321 aa20.85■□□□□ 0.93
LIME1-205ENST00000480139 THAP12O43422 761 aa20.85■□□□□ 0.93
LIME1-205ENST00000480139 PNMA6AP0CW24 399 aaPredicted RBP20.85■□□□□ 0.93
LIME1-205ENST00000480139 CEBPBP17676 345 aa20.85■□□□□ 0.93
LIME1-205ENST00000480139 SOX5P35711 763 aa20.85■□□□□ 0.93
LIME1-205ENST00000480139 PLA2G4AP47712 749 aa20.85■□□□□ 0.93
LIME1-205ENST00000480139 USP46P62068 366 aa20.85■□□□□ 0.93
LIME1-205ENST00000480139 SARM1Q6SZW1 724 aa20.85■□□□□ 0.93
LIME1-205ENST00000480139 TMEM150AQ86TG1 271 aa20.85■□□□□ 0.93
LIME1-205ENST00000480139 OVCA2Q8WZ82 227 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms